##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781181_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1012312 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.37693616197378 34.0 34.0 34.0 33.0 34.0 2 33.371738159776825 34.0 34.0 34.0 33.0 34.0 3 33.449324911687306 34.0 34.0 34.0 34.0 34.0 4 33.50980330174887 34.0 34.0 34.0 34.0 34.0 5 33.5055447332443 34.0 34.0 34.0 34.0 34.0 6 36.992176325085545 38.0 37.0 38.0 35.0 38.0 7 36.8901524431203 38.0 37.0 38.0 35.0 38.0 8 36.72869530342424 38.0 37.0 38.0 34.0 38.0 9 36.674302981689436 38.0 37.0 38.0 34.0 38.0 10-11 36.616785635258694 38.0 37.0 38.0 34.0 38.0 12-13 36.56666472391911 38.0 37.0 38.0 34.0 38.0 14-15 36.57537745280111 38.0 37.0 38.0 34.0 38.0 16-17 36.53902403606793 38.0 37.0 38.0 34.0 38.0 18-19 36.546756335991276 38.0 37.0 38.0 34.0 38.0 20-21 36.49057652186282 38.0 37.0 38.0 34.0 38.0 22-23 36.532840171804736 38.0 37.0 38.0 34.0 38.0 24-25 36.538235247631164 38.0 37.0 38.0 34.0 38.0 26-27 36.36213094381969 38.0 37.0 38.0 34.0 38.0 28-29 36.35032084969851 38.0 37.0 38.0 34.0 38.0 30-31 36.381588383818425 38.0 37.0 38.0 34.0 38.0 32-33 36.34604203052024 38.0 37.0 38.0 34.0 38.0 34-35 36.35816477528667 38.0 37.0 38.0 34.0 38.0 36-37 36.322410482143844 38.0 37.0 38.0 34.0 38.0 38-39 36.31910171962794 38.0 37.0 38.0 34.0 38.0 40-41 36.31246048649033 38.0 37.0 38.0 34.0 38.0 42-43 36.30822068690286 38.0 37.0 38.0 34.0 38.0 44-45 36.28055085783829 38.0 37.0 38.0 34.0 38.0 46-47 36.299434858027965 38.0 37.0 38.0 34.0 38.0 48-49 36.29323568227977 38.0 37.0 38.0 34.0 38.0 50-51 36.217251203186365 38.0 37.0 38.0 34.0 38.0 52-53 36.24818534206845 38.0 37.0 38.0 34.0 38.0 54-55 36.260286848323446 38.0 37.0 38.0 34.0 38.0 56-57 36.205195631386374 38.0 37.0 38.0 34.0 38.0 58-59 36.219388390140594 38.0 37.0 38.0 34.0 38.0 60-61 36.222985601277074 38.0 37.0 38.0 34.0 38.0 62-63 36.19126464963371 38.0 37.0 38.0 34.0 38.0 64-65 36.15179509874426 38.0 37.0 38.0 34.0 38.0 66-67 36.14551195678803 38.0 37.0 38.0 34.0 38.0 68-69 36.11791917906733 38.0 37.0 38.0 33.5 38.0 70-71 36.08048309216922 38.0 37.0 38.0 33.0 38.0 72-73 36.05081190383992 38.0 37.0 38.0 33.0 38.0 74-75 36.06354019314203 38.0 37.0 38.0 33.0 38.0 76 35.273747619311045 38.0 36.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 9.0 21 27.0 22 91.0 23 211.0 24 459.0 25 856.0 26 1702.0 27 3085.0 28 5511.0 29 9310.0 30 15001.0 31 23154.0 32 34796.0 33 50217.0 34 72314.0 35 105613.0 36 171192.0 37 518763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.92940516362544 18.217506065323736 9.999486324374303 24.85360244667652 2 23.23226436118509 22.770845352025855 30.349141371434897 23.64774891535416 3 20.267862082045852 23.094559779988778 30.398533258521088 26.239044879444286 4 14.382818735725744 17.95069109128411 36.8992958692577 30.76719430373245 5 13.74102055492773 33.7387090146121 36.088281083302384 16.431989347157796 6 29.180430539201353 37.597400801333976 19.44805554018919 13.77411311927548 7 27.404100712033447 31.415117078529146 22.196911624084276 18.98387058535313 8 24.85873920293348 36.239321474011966 20.615976102229354 18.2859632208252 9 24.56979666347924 18.172954583171986 21.852748954867668 35.4044997984811 10-11 24.05829428081461 25.97894720204838 28.16285888145157 21.799899635685442 12-13 24.8737049447206 24.15954764934131 27.484658879871027 23.482088526067063 14-15 22.616347529220242 24.888967037830234 24.91731798101771 27.577367451931817 16-17 22.809222848291828 28.56782296367128 25.58583717272936 23.037117015307533 18-19 22.208172974339927 27.883547759979137 27.3480903120777 22.560188953603237 20-21 22.13082527916295 28.04930693304041 27.225104513233074 22.594763274563572 22-23 22.206493650178995 27.949930456222983 27.385578754376123 22.4579971392219 24-25 22.5638933451347 27.794642363223986 27.1305684413501 22.510895850291217 26-27 22.197306759180965 27.68948703561748 27.391703348374808 22.72150285682675 28-29 21.91542725958005 27.80501465951209 27.71442993859601 22.565128142311856 30-31 22.388107618994933 28.041848758090392 27.434130979381848 22.135912643532823 32-33 21.771400516836707 28.01690585511186 27.557215562000646 22.654478066050782 34-35 22.264380941844017 27.545954211744995 27.955363563802464 22.234301282608524 36-37 22.294016074095733 27.741546084606327 27.246787551663914 22.717650289634026 38-39 21.85561368431867 27.68820284655324 27.825462900765775 22.63072056836232 40-41 21.806369972893734 27.087548107698023 28.42685851792728 22.679223401480968 42-43 21.96788144366559 26.996617643572336 28.334594472850267 22.700906439911805 44-45 21.661009649199062 26.99642007602399 28.52539533266424 22.817174942112707 46-47 21.76107761243569 26.698883348216757 28.45190020467998 23.088138834667575 48-49 21.372659812389855 26.485362220343134 28.903984147179923 23.237993820087087 50-51 21.08974308316013 26.523838500383278 29.075127035933583 23.311291380523 52-53 20.66556555686389 26.49346248982527 29.6467887370692 23.194183216241633 54-55 20.37598092287753 26.637341056907353 29.501280237713274 23.48539778250184 56-57 20.40388733908123 26.51880052790049 29.190358308505676 23.8869538245126 58-59 20.043128995803666 26.320788452571936 29.56637874489288 24.06970380673152 60-61 20.305943226989307 26.815793944949778 28.635292281431024 24.242970546629895 62-63 19.78061111594054 27.05499885410822 28.551918776029524 24.612471253921715 64-65 19.754729767107374 26.790159555552044 28.31706035293467 25.138050324405913 66-67 19.76826314416899 26.8311054299465 27.86245742419333 25.53817400169118 68-69 20.130503244059145 26.926283596361593 27.479275164178635 25.463937995400627 70-71 20.55398928393618 27.024820411098556 26.851899414409786 25.56929089055548 72-73 20.29700329542671 26.946534270066934 26.584294170176783 26.172168264329578 74-75 20.357212005784778 27.012620614988265 26.205507788112758 26.424659591114203 76 20.519365571088755 27.06369182623539 25.869593564039544 26.54734903863631 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 1.0 7 1.0 8 0.0 9 0.0 10 3.5 11 13.0 12 19.0 13 20.0 14 45.5 15 115.5 16 261.0 17 361.0 18 527.0 19 911.5 20 1460.5 21 1791.0 22 2378.0 23 3701.0 24 5375.5 25 6314.0 26 7593.0 27 10143.0 28 13181.0 29 14948.0 30 16710.0 31 20376.0 32 24415.5 33 26551.0 34 28750.5 35 33139.5 36 37524.5 37 39720.0 38 42129.0 39 46237.5 40 49445.5 41 52166.0 42 53378.0 43 54064.0 44 54493.0 45 54010.5 46 53785.0 47 52126.0 48 48221.0 49 44003.0 50 42031.0 51 40261.0 52 36468.5 53 32904.0 54 31362.0 55 29903.5 56 26881.0 57 23312.0 58 21307.0 59 19538.0 60 16292.0 61 13376.5 62 11938.0 63 10884.5 64 9133.0 65 7634.5 66 6437.5 67 6041.0 68 5559.0 69 4792.0 70 4248.5 71 3990.0 72 3701.5 73 3250.0 74 2887.5 75 2688.0 76 2508.5 77 2099.5 78 1708.5 79 1547.0 80 1386.5 81 1103.0 82 864.0 83 748.0 84 635.5 85 418.0 86 258.0 87 203.0 88 155.5 89 87.5 90 44.0 91 17.5 92 14.0 93 12.5 94 6.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 1012312.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.7028600386389 #Duplication Level Percentage of deduplicated Percentage of total 1 65.80410845723046 38.62889368732214 2 22.143415344114256 25.997636234459765 3 7.415185784614797 13.058778398242415 4 2.20773293759915 5.18400950554304 5 0.7351511304280479 2.157773695838243 6 0.32694483496580656 1.1515558132412183 7 0.19352612553229737 0.7952375942659761 8 0.1362694108781258 0.6399523323461117 9 0.1283701234912377 0.6782124053204026 >10 0.8676474720440651 9.58172785177826 >50 0.03777291561234706 1.429872780455011 >100 0.003706965280030945 0.322952114408137 >500 0.0 0.0 >1k 1.6849820938176805E-4 0.37339758677924484 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAGACCAGCATCTCGTATGCCGT 3775 0.3729087475007705 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.902701933791164E-4 0.0 2 0.0 0.0 0.0 0.001086621515896285 0.0 3 0.0 0.0 0.0 0.0011854052900686744 0.0 4 0.0 0.0 0.0 0.0018768917092754013 0.0 5 0.0 0.0 0.0 0.0020744592576201802 0.0 6 0.0 0.0 0.0 0.00217324303179257 0.0 7 0.0 0.0 0.0 0.00217324303179257 0.0 8 0.0 0.0 0.0 0.00217324303179257 0.0 9 0.0 0.0 0.0 0.0022720268059649596 9.878377417238954E-5 10 0.0 0.0 0.0 0.002568378128482128 9.878377417238954E-5 11 0.0 0.0 0.0 0.0026671619026545175 9.878377417238954E-5 12 0.0 0.0 0.0 0.002765945676826907 9.878377417238954E-5 13 0.0 0.0 0.0 0.002864729450999297 9.878377417238954E-5 14 0.0 0.0 0.0 0.0031610807735164654 9.878377417238954E-5 15 0.0 0.0 0.0 0.003457432096033634 9.878377417238954E-5 16 0.0 0.0 0.0 0.003654999644378413 9.878377417238954E-5 17 0.0 0.0 0.0 0.0037537834185508026 9.878377417238954E-5 18 0.0 0.0 0.0 0.0041489185152403605 9.878377417238954E-5 19 0.0 0.0 0.0 0.0041489185152403605 9.878377417238954E-5 20 0.0 0.0 0.0 0.004741621160274698 9.878377417238954E-5 21 0.0 0.0 0.0 0.005136756256964256 9.878377417238954E-5 22 0.0 0.0 0.0 0.0061245939986881515 9.878377417238954E-5 23 0.0 0.0 0.0 0.006519729095377709 9.878377417238954E-5 24 0.0 0.0 0.0 0.006914864192067268 9.878377417238954E-5 25 0.0 0.0 0.0 0.007211215514584437 9.878377417238954E-5 26 0.0 0.0 0.0 0.008495404578825501 9.878377417238954E-5 27 0.0 0.0 0.0 0.013533377061617367 9.878377417238954E-5 28 0.0 0.0 0.0 0.022621484285477205 9.878377417238954E-5 29 0.0 0.0 0.0 0.03832810437888714 9.878377417238954E-5 30 0.0 0.0 0.0 0.05610918372991726 9.878377417238954E-5 31 0.0 0.0 0.0 0.07448296572598172 9.878377417238954E-5 32 0.0 0.0 0.0 0.09186890998032227 9.878377417238954E-5 33 0.0 0.0 0.0 0.11765147503931594 9.878377417238954E-5 34 0.0 0.0 0.0 0.1528184986446866 9.878377417238954E-5 35 0.0 0.0 0.0 0.2076434933103628 9.878377417238954E-5 36 0.0 0.0 0.0 0.30198199764499484 9.878377417238954E-5 37 0.0 0.0 0.0 0.47426089980164216 9.878377417238954E-5 38 0.0 0.0 0.0 0.7355439824876125 9.878377417238954E-5 39 0.0 0.0 0.0 1.0676550312551862 9.878377417238954E-5 40 0.0 0.0 0.0 1.4628889117189168 9.878377417238954E-5 41 0.0 0.0 0.0 1.8587154948276816 9.878377417238954E-5 42 0.0 0.0 0.0 2.2842759939623356 9.878377417238954E-5 43 0.0 0.0 0.0 2.7376935174136037 9.878377417238954E-5 44 0.0 0.0 0.0 3.2283525237278625 9.878377417238954E-5 45 0.0 0.0 0.0 3.8042619271528935 9.878377417238954E-5 46 0.0 0.0 0.0 4.4346999739210835 9.878377417238954E-5 47 0.0 0.0 0.0 5.15345071479939 9.878377417238954E-5 48 0.0 0.0 0.0 5.909245370992342 9.878377417238954E-5 49 0.0 0.0 0.0 6.678375836698567 9.878377417238954E-5 50 0.0 0.0 0.0 7.439603600471001 9.878377417238954E-5 51 0.0 0.0 0.0 8.165664340638065 9.878377417238954E-5 52 0.0 0.0 0.0 8.857743462489825 9.878377417238954E-5 53 0.0 0.0 0.0 9.508530966737528 9.878377417238954E-5 54 0.0 0.0 0.0 10.140154418795786 9.878377417238954E-5 55 0.0 0.0 0.0 10.791238274366005 9.878377417238954E-5 56 0.0 0.0 0.0 11.437778076324296 9.878377417238954E-5 57 0.0 0.0 0.0 12.131734089885331 9.878377417238954E-5 58 0.0 0.0 0.0 12.826282806091402 9.878377417238954E-5 59 0.0 0.0 0.0 13.53841503410016 9.878377417238954E-5 60 0.0 0.0 0.0 14.264475774267222 9.878377417238954E-5 61 0.0 0.0 0.0 14.945293545863331 9.878377417238954E-5 62 0.0 0.0 0.0 15.576423079050727 9.878377417238954E-5 63 0.0 0.0 0.0 16.195599775563267 9.878377417238954E-5 64 0.0 0.0 0.0 16.769039584633987 9.878377417238954E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCCG 625 0.0 52.639996 43 CGTATGC 640 0.0 51.40625 41 ATCTCGT 580 0.0 50.689655 37 TCTCGTA 585 0.0 49.65812 38 TCGTATG 665 0.0 48.947365 40 ATGCCGT 675 0.0 48.74074 44 CTCGTAT 665 0.0 47.894733 39 GCCGTCT 700 0.0 47.000004 46 CCGTCTT 710 0.0 46.338028 47 TGCCGTC 725 0.0 45.86207 45 GTATGCC 725 0.0 45.37931 42 CGTCTTC 730 0.0 45.068493 48 CATCTCG 685 0.0 42.91971 36 GCATCTC 880 0.0 33.806816 35 AGCATCT 895 0.0 33.240223 34 GTCTTCT 1050 0.0 31.333334 49 CTGCTTG 1040 0.0 30.961538 54 CAGCATC 1065 0.0 28.59155 33 CCAGCAT 1065 0.0 28.59155 32 ACCAGCA 1190 0.0 28.529411 31 >>END_MODULE