SRR1781180_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781180_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	199528
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGATCCG	15	0.002222203	70.0	32
GCGAAGT	40	7.452927E-7	52.5	32
CACGCGA	20	0.0069436613	52.5	36
CGCGATA	20	0.0069436613	52.5	38
CGATTAA	20	0.0069436613	52.5	42
CGGATCC	20	0.0069436613	52.5	31
TTGCGAG	20	0.0069436613	52.5	48
GACGAAT	20	0.0069436613	52.5	23
GATAGCA	20	0.0069436613	52.5	41
ACGGCTA	35	2.0812182E-5	50.0	50
CCGCATG	40	4.5810983E-5	43.75	21
TACCAAG	35	0.0012532761	40.0	42
TTTCGTC	35	0.0012532761	40.0	18
GCTTGCT	45	9.174581E-5	38.88889	35
ATTTTGA	45	9.174581E-5	38.88889	30
GTTGTCA	55	6.6714274E-6	38.181816	58
CGAAGTT	55	6.6714274E-6	38.181816	33
GTCAAAA	65	4.843241E-7	37.692307	61
CTCAACG	50	1.7054306E-4	35.000004	46
CAACGGC	50	1.7054306E-4	35.000004	48