SRR1781175_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781175_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	157738
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTTGCG	25	2.3846942E-4	56.000004	31
GTAGGCA	20	0.0069409763	52.5	33
TACTCGG	20	0.0069409763	52.5	31
GCAGAGT	20	0.0069409763	52.5	48
AGTCATC	30	5.863901E-4	46.666664	8
TTGCGTT	30	5.863901E-4	46.666664	33
GGTAGAT	30	5.863901E-4	46.666664	18
TGGAGCA	35	0.0012524776	40.0	39
TGGACTA	35	0.0012524776	40.0	42
AAAGTAG	35	0.0012524776	40.0	21
GCTTAAT	35	0.0012524776	40.0	13
GATGCAG	45	9.1658294E-5	38.88889	45
TATAGAT	50	1.7038124E-4	35.000004	5
ATCTAAT	40	0.0024131308	35.0	1
AGCTGAT	40	0.0024131308	35.0	26
TGCAGAG	40	0.0024131308	35.0	47
GCAGTAG	55	2.9818396E-4	31.81818	46
GGGCTTA	45	0.004297306	31.111113	6
ATAGCCG	45	0.004297306	31.111113	11
GTGCTAG	45	0.004297306	31.111113	27