SRR1781172_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781172_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	326093
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCGA	20	0.0069475938	52.5	11
ATCGATA	20	0.0069475938	52.5	23
CCCAACG	45	9.1874055E-5	38.888885	21
CTACGGG	45	9.1874055E-5	38.888885	38
CGGGCTA	45	9.1874055E-5	38.888885	41
CGCAAAG	45	9.1874055E-5	38.888885	12
TTTACGG	50	1.7078024E-4	35.000004	36
TACGGAC	50	1.7078024E-4	35.000004	38
TATCCAC	75	1.4874968E-6	32.666668	65
TGGCGTA	45	0.0043039806	31.111109	67
GGACTAG	140	1.2732926E-11	30.0	1
CGTGCGA	60	4.9765577E-4	29.166666	10
CTCGCTA	60	4.9765577E-4	29.166666	13
CCAACGT	60	4.9765577E-4	29.166666	22
CGATTAG	50	0.0072029145	28.000002	52
TTGCGAT	50	0.0072029145	28.000002	49
CGATCAA	50	0.0072029145	28.000002	35
GACTAGG	100	4.4082662E-7	28.000002	2
TCACCGG	65	7.9470477E-4	26.923077	31
TAACGGC	65	7.9470477E-4	26.923077	36