SRR1781169_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781169_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	276565
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGAGTC	15	0.0022231129	70.00001	61
GATAACT	20	0.006946483	52.500004	3
ACGGAGC	20	0.006946483	52.500004	3
ATAAGTT	20	0.006946483	52.500004	65
GTACTAG	20	0.006946483	52.500004	1
CTCGCTT	35	0.0012541158	40.000004	18
TCGTTCG	45	9.1837835E-5	38.88889	23
TTCGGTA	45	9.1837835E-5	38.88889	26
CGGTAAG	45	9.1837835E-5	38.88889	28
GAAATCG	65	4.8522816E-7	37.69231	48
CGTGCGA	40	0.0024162682	35.000004	10
TACGGAC	40	0.0024162682	35.000004	38
TAACACG	40	0.0024162682	35.000004	4
CGAGAAT	40	0.0024162682	35.000004	14
AATCCGA	65	2.0982823E-5	32.307693	20
ATCCGAG	65	2.0982823E-5	32.307693	21
CGTTCGG	55	2.9876217E-4	31.81818	24
CGTTCAT	55	2.9876217E-4	31.81818	42
CGCAAAA	45	0.0043028602	31.111113	58
TATCGGC	45	0.0043028602	31.111113	12