SRR1781168_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781168_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	246284
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCAGC	20	0.006945584	52.5	7
CGGAATC	20	0.006945584	52.5	20
CGTAGCG	20	0.006945584	52.5	15
GGCTAAA	20	0.006945584	52.5	1
AAAGCGA	35	0.0012538488	40.0	25
AACCGTA	40	0.0024157558	35.0	10
ACCGACC	40	0.0024157558	35.0	8
TGTTCCA	40	0.0024157558	35.0	7
GGTCTAT	40	0.0024157558	35.0	38
GTAAGGT	40	0.0024157558	35.0	19
GATCTGA	45	0.0043019536	31.111109	10
ATCGGTT	45	0.0043019536	31.111109	25
AATCGGC	45	0.0043019536	31.111109	23
CGGGAAT	60	4.9730623E-4	29.166666	13
ATTCGGG	75	5.570516E-5	28.0	45
GTGTTCC	50	0.007199545	27.999998	6
ACAGTGC	50	0.007199545	27.999998	8
ACAAAAG	50	0.007199545	27.999998	46
GTACAGG	50	0.007199545	27.999998	1
GTCTATC	50	0.007199545	27.999998	39