SRR1781167_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781167_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	252568
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTCGTT	15	0.002222889	70.00001	1
GTACGCT	15	0.002222889	70.00001	6
ACGTTTG	20	0.00694579	52.5	60
ACAATCG	45	9.181519E-5	38.888885	38
CATCGTT	45	9.181519E-5	38.888885	32
GATTCCG	45	9.181519E-5	38.888885	44
GAATTCG	55	6.6784796E-6	38.181816	23
TTCGAAC	55	6.6784796E-6	38.181816	26
TCGAACA	55	6.6784796E-6	38.181816	27
TCGTTGT	50	1.7067141E-4	35.0	34
ATTCCGC	50	1.7067141E-4	35.0	45
GCGGAAT	40	0.0024158729	35.0	19
CGGTAAG	40	0.0024158729	35.0	28
TACCGCG	40	0.0024158729	35.0	60
AGTCATA	55	2.986893E-4	31.81818	10
CGGATAG	55	2.986893E-4	31.81818	30
GCTAGTC	55	2.986893E-4	31.81818	7
CGTATTG	45	0.0043021603	31.111109	57
CCGGAAT	45	0.0043021603	31.111109	56
CGAGAAT	45	0.0043021603	31.111109	14