SRR1781167_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781167_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	227473
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCCGT	4057	1.7835083724222216	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCCG	398	0.17496582011931086	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCC	234	0.10286935152743404	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCTCGT	15	0.0022226044	70.0	25
CGTATGC	585	0.0	56.83761	41
TATGCCG	590	0.0	56.355934	43
TCGTATG	590	0.0	56.355934	40
CTCGTAT	580	0.0	56.12069	39
TTTACGA	25	2.386948E-4	55.999996	48
GTTTACG	25	2.386948E-4	55.999996	47
GTCCATA	25	2.386948E-4	55.999996	29
CCGTCTT	590	0.0	55.169495	47
TCTCGTA	505	0.0	54.752476	38
ATGCCGT	610	0.0	54.508198	44
TGCCGTC	610	0.0	54.508198	45
AAACTCG	45	2.6906491E-8	54.444447	36
AACTCGT	45	2.6906491E-8	54.444447	37
CGTCTTC	610	0.0	53.360657	48
GCCGTCT	610	0.0	53.360657	46
GTATGCC	625	0.0	53.2	42
ATCTCGT	520	0.0	53.173077	37
CTTGAAA	560	0.0	53.125004	57
AATCTCG	525	0.0	52.666668	36