##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781164_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 731625 Sequences flagged as poor quality 0 Sequence length 76 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.25217563642576 34.0 34.0 34.0 32.0 34.0 2 33.32138458909961 34.0 34.0 34.0 33.0 34.0 3 33.3825675721852 34.0 34.0 34.0 33.0 34.0 4 33.45473432427815 34.0 34.0 34.0 34.0 34.0 5 33.437616265163165 34.0 34.0 34.0 34.0 34.0 6 36.85382948915086 38.0 37.0 38.0 34.0 38.0 7 36.79571228429865 38.0 37.0 38.0 34.0 38.0 8 36.58990056381343 38.0 37.0 38.0 34.0 38.0 9 36.54962856654707 38.0 37.0 38.0 34.0 38.0 10-11 36.47674901759781 38.0 37.0 38.0 34.0 38.0 12-13 36.415938493080475 38.0 37.0 38.0 34.0 38.0 14-15 36.4386318127456 38.0 37.0 38.0 34.0 38.0 16-17 36.38740133264992 38.0 37.0 38.0 34.0 38.0 18-19 36.39997266359132 38.0 37.0 38.0 34.0 38.0 20-21 36.33528310268238 38.0 37.0 38.0 34.0 38.0 22-23 36.381427643943276 38.0 37.0 38.0 34.0 38.0 24-25 36.38732615752606 38.0 37.0 38.0 34.0 38.0 26-27 36.184552195455325 38.0 37.0 38.0 34.0 38.0 28-29 36.17036186570989 38.0 37.0 38.0 34.0 38.0 30-31 36.2031792243294 38.0 37.0 38.0 34.0 38.0 32-33 36.165854775328896 38.0 37.0 38.0 34.0 38.0 34-35 36.18170510849137 38.0 37.0 38.0 34.0 38.0 36-37 36.14746557321032 38.0 37.0 38.0 34.0 38.0 38-39 36.15833999658295 38.0 37.0 38.0 34.0 38.0 40-41 36.142732274047496 38.0 37.0 38.0 34.0 38.0 42-43 36.12892465402358 38.0 37.0 38.0 34.0 38.0 44-45 36.10913992824193 38.0 37.0 38.0 33.5 38.0 46-47 36.12295028190672 38.0 37.0 38.0 34.0 38.0 48-49 36.11000239193576 38.0 37.0 38.0 34.0 38.0 50-51 36.0394525884162 38.0 37.0 38.0 32.5 38.0 52-53 36.07403587903639 38.0 37.0 38.0 33.0 38.0 54-55 36.08265504869298 38.0 37.0 38.0 33.5 38.0 56-57 36.01872270630446 38.0 37.0 38.0 32.0 38.0 58-59 36.03721988723731 38.0 37.0 38.0 32.0 38.0 60-61 36.04352776354007 38.0 37.0 38.0 32.5 38.0 62-63 36.02107090381001 38.0 37.0 38.0 32.0 38.0 64-65 35.969691440287036 38.0 37.0 38.0 32.0 38.0 66-67 35.963208610968735 38.0 37.0 38.0 32.0 38.0 68-69 35.931967196309586 38.0 37.0 38.0 32.0 38.0 70-71 35.90343276951991 38.0 37.0 38.0 32.0 38.0 72-73 35.88655390398087 38.0 37.0 38.0 32.0 38.0 74-75 35.88105791901589 38.0 37.0 38.0 32.0 38.0 76 35.10240218691269 38.0 35.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 5.0 20 13.0 21 27.0 22 61.0 23 159.0 24 355.0 25 791.0 26 1505.0 27 2823.0 28 4760.0 29 7866.0 30 12479.0 31 19312.0 32 28410.0 33 40365.0 34 56528.0 35 80479.0 36 128110.0 37 347576.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.8316418930463 18.97215103365795 9.627746454809499 24.568460618486245 2 22.22422689219204 23.193029215786776 31.82368016401845 22.759063728002733 3 19.50972151033658 24.191081496668374 31.505484366991286 24.793712626003757 4 13.489560908935589 18.415991799077396 38.54228600717581 29.552161284811206 5 12.756125064069707 34.84572014351615 37.0773278660516 15.32082692636255 6 28.0356740133265 39.52434648898001 19.63847599521613 12.801503502477363 7 26.063625491201094 32.56559029557492 22.988279514778746 18.382504698445242 8 23.620844011617972 37.90944814624979 20.92998462327012 17.53972321886212 9 23.812745600546727 18.12991628224842 22.46492397061336 35.59241414659149 10-11 23.268272680676578 26.48269263625491 29.303604988894584 20.945429694173928 12-13 23.854706987869466 24.757218520416878 28.692499572868613 22.695574918845036 14-15 21.81472749017598 25.603007004954726 25.866666666666667 26.71559883820263 16-17 21.846232701178884 29.252895950794468 26.503604988894587 22.39726635913207 18-19 21.269981206219033 28.787903639159406 28.167367162139072 21.77474799248249 20-21 21.224739449854777 28.866427473090724 28.14850504015035 21.760328036904152 22-23 21.193439261916964 28.868751067828462 28.376217324448998 21.56159234580557 24-25 21.655902955749188 28.686963950111057 28.08276097727661 21.574372116863145 26-27 21.31201093456347 28.408405945668886 28.27910473261575 22.000478387151887 28-29 21.291576969075688 28.35885870493764 28.5662737057919 21.783290620194773 30-31 21.40679993165898 28.54679651460789 28.60556979326841 21.44083376046472 32-33 20.803212028019818 28.85344267896805 28.706031095164875 21.637314197847257 34-35 21.099675380146934 28.25580044421664 29.294105586878523 21.350418588757904 36-37 21.441038783529816 28.62641380488638 28.403690415171706 21.528856996412095 38-39 21.092636254912012 28.52321886212199 28.638988552878864 21.745156330087134 40-41 21.01547924141466 28.07654194430207 29.10322911327524 21.80474970100803 42-43 21.127763540064922 28.039296087476508 29.119835981547926 21.713104390910644 44-45 20.825081154963268 28.22012643089014 29.23997949769349 21.714812916453102 46-47 21.066188279514776 27.952708012984793 29.03885187083547 21.94225183666496 48-49 20.822757560225526 27.81739279002221 29.199521612848113 22.16032803690415 50-51 20.61698274389202 27.69424226892192 29.478216299333678 22.210558687852384 52-53 20.307466256620536 27.60765419443021 30.039774474628395 22.045105074320862 54-55 20.019203827097215 27.801811037075 29.882180078592175 22.296805057235606 56-57 20.1780967025457 27.61619682214249 29.510131556466767 22.695574918845036 58-59 19.843430719289255 27.363676746967368 30.097454296941738 22.69543823680164 60-61 20.146454809499403 27.89154279856484 29.118674184179056 22.843328207756706 62-63 19.650504015035025 28.15123868101828 29.129950452759267 23.068306851187426 64-65 19.582094652315053 28.00416880232359 28.9664103878353 23.447326157526057 66-67 19.527695199043226 27.866324961558174 28.768289765931996 23.837690073466597 68-69 19.854433623782676 27.870357081838375 28.561284811207926 23.713924483171024 70-71 20.33746796514608 27.80379292670425 28.00512557662737 23.853613531522296 72-73 20.200922603792925 27.517785750896977 27.983188108662226 24.298103536647872 74-75 20.21185716726465 27.30770545019648 28.037519220912355 24.44291816162652 76 20.118913377754996 27.45108491371946 27.827780625320347 24.602221083205194 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1.0 1 0.5 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 1.0 10 2.0 11 5.5 12 9.0 13 24.5 14 65.5 15 162.0 16 369.5 17 506.0 18 714.0 19 1239.0 20 2015.5 21 2475.0 22 3132.5 23 4568.0 24 6319.0 25 7292.0 26 8208.0 27 10450.0 28 13249.0 29 14722.0 30 15974.0 31 18816.5 32 22066.0 33 23725.0 34 25343.0 35 28539.5 36 31900.0 37 33682.0 38 34374.0 39 36529.0 40 38646.0 41 39300.5 42 39301.0 43 38676.5 44 37330.5 45 35513.0 46 34417.0 47 33404.0 48 30961.0 49 28139.5 50 26748.0 51 25405.0 52 22569.0 53 19945.0 54 18814.0 55 17953.5 56 16088.0 57 13954.0 58 12825.0 59 11814.5 60 9676.5 61 7784.0 62 7019.0 63 6272.5 64 5073.0 65 4235.0 66 3654.0 67 3458.0 68 3207.0 69 2768.5 70 2459.5 71 2338.0 72 2286.0 73 2082.5 74 1788.5 75 1646.0 76 1512.0 77 1304.5 78 1066.0 79 901.0 80 796.5 81 615.5 82 449.5 83 360.0 84 314.0 85 215.5 86 133.5 87 104.0 88 81.0 89 43.0 90 18.5 91 11.0 92 13.0 93 8.0 94 1.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 731625.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.22107109116316 #Duplication Level Percentage of deduplicated Percentage of total 1 66.4426284732257 41.34131509716318 2 22.260096746175314 27.700941242798883 3 7.179462561181584 13.40141551246871 4 2.105433432379453 5.240092930951744 5 0.6922593377447204 2.1536558733667888 6 0.2970236250293859 1.1088676853225046 7 0.19153031029814177 0.8342054737221254 8 0.13254717831476465 0.6597781923884842 9 0.10231862645767341 0.572973707769576 >10 0.5872339840567455 6.25221706176822 >50 0.008585252961218894 0.32790356263672416 >100 6.603541314913818E-4 0.08066932486996395 >500 0.0 0.0 >1k 2.2011804381484926E-4 0.32596433477310577 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGGTCATTTATCTCGTATGCCGT 2380 0.3253032632837861 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.1004613018964635E-4 0.0 2 0.0 0.0 0.0 4.1004613018964635E-4 0.0 3 0.0 0.0 0.0 4.1004613018964635E-4 0.0 4 0.0 0.0 0.0 8.200922603792927E-4 0.0 5 0.0 0.0 0.0 0.0010934563471723903 0.0 6 0.0 0.0 0.0 0.001230138390568939 0.0 7 0.0 0.0 0.0 0.0013668204339654878 0.0 8 0.0 0.0 0.0 0.0013668204339654878 0.0 9 0.0 0.0 0.0 0.001776866564155134 0.0 10 0.0 0.0 0.0 0.0021869126943447805 0.0 11 0.0 0.0 0.0 0.0021869126943447805 0.0 12 0.0 0.0 0.0 0.0023235947377413294 0.0 13 0.0 0.0 0.0 0.002460276781137878 0.0 14 0.0 0.0 0.0 0.002460276781137878 0.0 15 0.0 0.0 0.0 0.0025969588245344268 0.0 16 0.0 0.0 0.0 0.0027336408679309756 0.0 17 0.0 0.0 0.0 0.003143686998120622 0.0 18 0.0 0.0 0.0 0.0032803690415171708 0.0 19 0.0 0.0 0.0 0.0034170510849137197 0.0 20 0.0 0.0 0.0 0.0034170510849137197 0.0 21 0.0 0.0 0.0 0.003553733128310268 0.0 22 0.0 0.0 0.0 0.003827097215103366 0.0 23 0.0 0.0 0.0 0.003827097215103366 0.0 24 0.0 0.0 0.0 0.004237143345293012 0.0 25 0.0 0.0 0.0 0.005330599692465402 0.0 26 0.0 0.0 0.0 0.005740645822655049 0.0 27 0.0 0.0 0.0 0.008610968733982573 0.0 28 0.0 0.0 0.0 0.017085255424568596 0.0 29 0.0 0.0 0.0 0.02665299846232701 0.0 30 0.0 0.0 0.0 0.03786092602084401 0.0 31 0.0 0.0 0.0 0.051939176490688535 0.0 32 0.0 0.0 0.0 0.06588074491713651 0.0 33 0.0 0.0 0.0 0.08392277464548095 0.0 34 0.0 0.0 0.0 0.10825217837006663 0.0 35 0.0 0.0 0.0 0.13968904835127285 0.0 36 0.0 0.0 0.0 0.19723218862121988 0.0 37 0.0 0.0 0.0 0.30302409021014864 0.0 38 0.0 0.0 0.0 0.4755168289765932 0.0 39 0.0 0.0 0.0 0.7134802665299846 0.0 40 0.0 0.0 0.0 0.9938151375363061 0.0 41 0.0 0.0 0.0 1.2660857679822313 0.0 42 0.0 0.0 0.0 1.5275585169998291 1.3668204339654878E-4 43 0.0 2.7336408679309756E-4 0.0 1.8221083205193918 1.3668204339654878E-4 44 0.0 2.7336408679309756E-4 0.0 2.1366137023748504 1.3668204339654878E-4 45 0.0 2.7336408679309756E-4 0.0 2.496360840594567 1.3668204339654878E-4 46 0.0 2.7336408679309756E-4 0.0 2.9069536989577993 1.3668204339654878E-4 47 0.0 2.7336408679309756E-4 0.0 3.345703058260721 1.3668204339654878E-4 48 0.0 2.7336408679309756E-4 0.0 3.8738424739449853 1.3668204339654878E-4 49 0.0 2.7336408679309756E-4 0.0 4.430001708525542 1.3668204339654878E-4 50 0.0 2.7336408679309756E-4 0.0 5.0133606697420126 1.3668204339654878E-4 51 0.0 2.7336408679309756E-4 0.0 5.544780454467794 1.3668204339654878E-4 52 0.0 2.7336408679309756E-4 0.0 6.065812403895438 1.3668204339654878E-4 53 0.0 2.7336408679309756E-4 0.0 6.510985819237997 1.3668204339654878E-4 54 0.0 2.7336408679309756E-4 0.0 6.941124209806937 1.3668204339654878E-4 55 0.0 2.7336408679309756E-4 0.0 7.395865368187255 1.3668204339654878E-4 56 0.0 2.7336408679309756E-4 0.0 7.863591320690245 1.3668204339654878E-4 57 0.0 2.7336408679309756E-4 0.0 8.33186400136682 1.3668204339654878E-4 58 0.0 2.7336408679309756E-4 0.0 8.84551512045105 1.3668204339654878E-4 59 0.0 2.7336408679309756E-4 0.0 9.383222279173074 1.3668204339654878E-4 60 0.0 2.7336408679309756E-4 0.0 9.942115154621561 1.3668204339654878E-4 61 0.0 2.7336408679309756E-4 0.0 10.477772082692637 1.3668204339654878E-4 62 0.0 2.7336408679309756E-4 0.0 10.95766273705792 1.3668204339654878E-4 63 0.0 2.7336408679309756E-4 0.0 11.411857167264651 1.3668204339654878E-4 64 0.0 2.7336408679309756E-4 0.0 11.845275926875107 1.3668204339654878E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTT 465 0.0 46.666668 47 TATGCCG 480 0.0 46.666664 43 CTCGTAT 460 0.0 46.41304 39 GCCGTCT 480 0.0 45.9375 46 TCTCGTA 435 0.0 45.057472 38 CGTCTTC 495 0.0 44.545452 48 ATCTCGT 455 0.0 43.076923 37 TCGTATG 520 0.0 43.076923 40 ATGCCGT 520 0.0 43.076923 44 CGTATGC 505 0.0 42.9703 41 TGCCGTC 515 0.0 42.815533 45 TATCTCG 470 0.0 40.957447 36 GCACGAT 35 0.0012554695 40.0 16 GTATGCC 645 0.0 35.271317 42 AGGACCG 40 0.0024188606 35.0 30 TTCGTAA 45 0.004307448 31.111113 20 GTAAGCG 45 0.004307448 31.111113 46 CGGTCAT 700 0.0 31.000002 28 CTGCTTG 750 0.0 29.400002 54 ACTACGC 60 4.982543E-4 29.166666 8 >>END_MODULE