SRR1781163_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781163_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268442
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGACCG	20	0.0069462615	52.5	42
GGTCTAA	20	0.0069462615	52.5	1
TACACGT	20	0.0069462615	52.5	28
CGGTAAG	35	0.0012540503	40.0	28
CCAAACG	35	0.0012540503	40.0	9
GGACTAT	45	9.183059E-5	38.88889	6
CTTCGTC	40	0.0024161418	35.0	21
AGTGCGC	55	2.9873886E-4	31.818184	10
CAGTATT	55	2.9873886E-4	31.818184	14
TCGTTCG	45	0.004302636	31.111113	23
TCTTCGT	45	0.004302636	31.111113	20
TTTAACG	45	0.004302636	31.111113	49
CCATACG	45	0.004302636	31.111113	23
TTGCGAT	45	0.004302636	31.111113	49
TTCGGTA	45	0.004302636	31.111113	26
CCGTGCG	95	2.8109935E-7	29.473682	9
CGTGCGA	60	4.974239E-4	29.166668	10
TAACGGC	50	0.0072006807	27.999998	51
TCTAGCA	100	4.4033732E-7	27.999998	3
CGATGTG	50	0.0072006807	27.999998	15