SRR1781161_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781161_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	242783
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAAACGA	20	0.0069454657	52.5	27
CGCAATA	30	5.870192E-4	46.666668	57
TATTCCC	50	3.469513E-6	42.000004	29
ACATTCG	35	0.0012538135	40.0	8
CCGTATA	35	0.0012538135	40.0	21
CGAGCAA	45	9.1804664E-5	38.888885	37
CATTCGA	50	1.7065191E-4	35.000004	9
ACCCGTA	40	0.0024156882	35.0	19
CGATAGA	40	0.0024156882	35.0	37
GATCCGC	45	0.0043018344	31.111109	34
TCTAGAC	45	0.0043018344	31.111109	35
TACATTC	45	0.0043018344	31.111109	45
ATTCCCG	45	0.0043018344	31.111109	29
TAACCGG	45	0.0043018344	31.111109	22
AATCTAG	45	0.0043018344	31.111109	33
CGGCTTT	45	0.0043018344	31.111109	26
GCGCTAT	45	0.0043018344	31.111109	19
GCTGCGT	60	4.9728557E-4	29.166668	6
GGCTTAA	60	4.9728557E-4	29.166668	11
GAAATCG	50	0.0071993447	28.000002	48