SRR1781158_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781158_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	210761
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCAA	20	0.006944202	52.5	12
TTAAGCA	20	0.006944202	52.5	14
CATCGTT	20	0.006944202	52.5	32
ACGGTTA	20	0.006944202	52.5	45
CGGTATA	35	2.0816227E-5	50.0	2
GCCGTTA	30	5.86842E-4	46.666668	62
TCGGTCA	30	5.86842E-4	46.666668	29
CTTCGGA	35	0.0012534374	40.0	66
ATTCCAG	35	0.0012534374	40.0	33
TTCGGTC	35	0.0012534374	40.0	28
TCGTTCC	50	1.7057569E-4	35.000004	62
GCGGTAT	50	1.7057569E-4	35.000004	1
CGGCAAA	60	1.2118468E-5	35.000004	34
TTCCCTA	50	1.7057569E-4	35.000004	26
AGCGTTA	40	0.0024149683	35.0	10
CGGAATA	40	0.0024149683	35.0	69
GCTTGGG	40	0.0024149683	35.0	1
GAGCGTT	40	0.0024149683	35.0	9
TTCGGAA	40	0.0024149683	35.0	67
GCTTTTA	65	2.0959276E-5	32.307693	27