##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781158_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 191355 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.193880483917326 34.0 34.0 34.0 32.0 34.0 2 33.239314363356065 34.0 34.0 34.0 32.0 34.0 3 33.30190483656032 34.0 34.0 34.0 33.0 34.0 4 33.369162028690134 34.0 34.0 34.0 33.0 34.0 5 33.353196937629015 34.0 34.0 34.0 33.0 34.0 6 36.7623161140289 38.0 37.0 38.0 34.0 38.0 7 36.65449557105902 38.0 37.0 38.0 34.0 38.0 8 36.44042747772465 38.0 37.0 38.0 34.0 38.0 9 36.37314938203862 38.0 37.0 38.0 34.0 38.0 10-11 36.29828852133469 38.0 37.0 38.0 34.0 38.0 12-13 36.23525384756081 38.0 37.0 38.0 34.0 38.0 14-15 36.24756604217292 38.0 37.0 38.0 34.0 38.0 16-17 36.191763998850305 38.0 37.0 38.0 33.5 38.0 18-19 36.177685453737816 38.0 37.0 38.0 33.5 38.0 20-21 36.12156463118288 38.0 37.0 38.0 32.5 38.0 22-23 36.18326670324789 38.0 37.0 38.0 33.5 38.0 24-25 36.18390426171253 38.0 37.0 38.0 33.5 38.0 26-27 35.96012907945964 38.0 36.5 38.0 31.5 38.0 28-29 35.934898487105116 38.0 36.0 38.0 32.0 38.0 30-31 35.97266076141204 38.0 37.0 38.0 32.0 38.0 32-33 35.92706487941261 38.0 36.5 38.0 32.0 38.0 34-35 35.915264821927835 38.0 36.5 38.0 32.0 38.0 36-37 35.85890622142092 38.0 36.0 38.0 31.0 38.0 38-39 35.675892973792166 38.0 36.0 38.0 31.0 38.0 40-41 35.77873847038227 38.0 36.0 38.0 31.0 38.0 42-43 35.84325207075854 38.0 36.0 38.0 31.0 38.0 44-45 35.81410206161323 38.0 36.0 38.0 31.0 38.0 46-47 35.83282903503958 38.0 36.0 38.0 31.0 38.0 48-49 35.821619503017956 38.0 36.0 38.0 31.0 38.0 50-51 35.71687178281205 38.0 36.0 38.0 31.0 38.0 52-53 35.74361788299234 38.0 36.0 38.0 31.0 38.0 54-55 35.75476470434533 38.0 36.0 38.0 31.0 38.0 56-57 35.70481043087455 38.0 36.0 38.0 31.0 38.0 58-59 35.689030858874865 38.0 36.0 38.0 31.0 38.0 60-61 35.6908024352643 38.0 36.0 38.0 31.0 38.0 62-63 35.670100075775395 38.0 36.0 38.0 31.0 38.0 64-65 35.61582399205665 38.0 36.0 38.0 31.0 38.0 66-67 35.5641033680855 38.0 36.0 38.0 31.0 38.0 68-69 35.46531838729064 38.0 36.0 38.0 31.0 38.0 70-71 35.31200125421337 38.0 36.0 38.0 29.0 38.0 72-73 35.16850095372475 38.0 36.0 38.0 27.0 38.0 74-75 35.20123069687231 38.0 36.0 38.0 27.0 38.0 76 34.2587024117478 37.0 34.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 4.0 21 7.0 22 24.0 23 72.0 24 147.0 25 297.0 26 601.0 27 1044.0 28 1776.0 29 2951.0 30 4380.0 31 6356.0 32 9078.0 33 12213.0 34 16473.0 35 22217.0 36 32626.0 37 81088.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.17501502443103 19.292937210943013 10.278278592145488 28.25376917248047 2 22.198008936270284 19.34415092367589 33.154085338768255 25.303754801285567 3 19.665543100519976 22.144704867915653 29.224739358783413 28.965012672780954 4 14.033079877714197 17.798332941391653 36.02362101852577 32.14496616236837 5 13.818818426484805 33.91131666274725 36.75158736380026 15.51827754696768 6 30.323221238013115 38.63395260118628 16.63818557132032 14.404640589480286 7 29.303127694599045 28.357764364662536 21.12722426902877 21.21188367170965 8 25.503383763162706 35.53029709179274 18.516370097462833 20.44994904758172 9 24.273209479762745 15.630634161636747 19.926314964333308 40.169841394267195 10-11 25.232944004598785 25.115361500875338 27.117138303153826 22.534556191372058 12-13 24.69702908207259 22.352172663374358 26.908102740978805 26.042695513574248 14-15 22.700739463301193 23.4762613989705 22.92649787045021 30.896501267278097 16-17 24.46029630790938 27.362755088709466 24.1681691097698 24.00877949361135 18-19 24.47179326382901 25.85168926863683 25.003527475111703 24.672989992422462 20-21 22.58733767082125 26.026756551958403 25.039324815134172 26.346580962086176 22-23 23.2005957513522 26.823704632750644 25.41611141595464 24.559588199942514 24-25 24.19978573854877 26.767265030963394 25.27553500039194 23.757414230095893 26-27 23.406495780094588 27.292205586475397 25.63089545608947 23.670403177340546 28-29 23.037809307308404 26.86525045073293 26.12291291055891 23.974027331399757 30-31 22.874761568811895 28.255859528102217 25.610253194324685 23.259125708761204 32-33 22.187557158161532 27.727783439157587 26.80593660996577 23.27872279271511 34-35 23.156959577748164 26.53471296804369 25.904993336991456 24.40333411721669 36-37 24.404379295027567 26.69802200099292 25.143320007316245 23.75427869666327 38-39 22.454338794387397 26.213059496746883 26.985184604530847 24.347417104334877 40-41 22.60641216586972 24.821143947114003 27.749732173185965 24.822711713830316 42-43 23.644796320974105 25.054218598939144 27.450027435917534 23.850957644169217 44-45 21.734472577147187 26.085286509367407 28.075305061273546 24.104935852211856 46-47 23.318700843981084 24.38922421676988 27.109038175119544 25.183036764129497 48-49 22.335188523947636 24.48224504193776 27.571006767526324 25.611559666588278 50-51 21.40079956102532 24.42528285124507 28.641007551409686 25.53291003631993 52-53 20.708369261320584 24.217292466880927 30.4844399153406 24.589898356457894 54-55 19.848971806328553 24.905542055342163 29.269943299103762 25.975542839225525 56-57 20.921846829191818 24.86399623735988 27.910689556060724 26.30346737738758 58-59 19.96603172114656 24.648167019414178 29.604400198583786 25.78140106085548 60-61 20.833006715267434 25.888531786470175 27.448198374748507 25.830263123513888 62-63 19.290585560868543 27.07559248517154 27.348645188262655 26.285176765697265 64-65 19.680175589872224 27.534425544145698 26.144339055681847 26.641059810300227 66-67 19.644900838755195 27.22583679548483 25.764939510334194 27.364322855425776 68-69 19.737399075017635 27.658017820281678 25.364375114316324 27.240207990384363 70-71 19.956886415301405 27.44062083561966 25.0424603485668 27.560032400512135 72-73 20.06114290193619 26.543596979436128 24.979488385461575 28.415771733166107 74-75 19.66502051161454 27.237856340309897 24.839173264351597 28.25794988372397 76 20.395077212510778 27.53573201640929 24.190117843798177 27.879072927281754 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 5.0 15 15.0 16 30.5 17 39.0 18 53.5 19 79.5 20 109.0 21 127.0 22 177.0 23 283.0 24 443.5 25 548.0 26 639.5 27 818.0 28 1117.0 29 1329.0 30 1536.0 31 1887.5 32 2505.5 33 2979.0 34 3338.0 35 4229.0 36 5297.0 37 5833.0 38 6678.0 39 8624.0 40 10610.0 41 11849.0 42 12203.0 43 12221.5 44 12188.0 45 11999.5 46 11863.0 47 11690.5 48 10837.5 49 9713.5 50 9270.0 51 8649.5 52 7020.5 53 5632.5 54 5253.0 55 4865.0 56 4026.5 57 3206.5 58 2837.0 59 2602.5 60 2194.5 61 1873.0 62 1725.0 63 1748.0 64 1735.5 65 1722.0 66 1751.5 67 1759.0 68 1773.0 69 1787.5 70 1715.0 71 1642.0 72 1609.0 73 1580.0 74 1445.5 75 1307.0 76 1263.5 77 1114.5 78 882.0 79 755.0 80 678.5 81 518.0 82 374.0 83 314.0 84 262.0 85 160.0 86 86.0 87 62.0 88 48.5 89 27.5 90 14.5 91 7.0 92 5.0 93 4.0 94 1.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 191355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.14237934728646 #Duplication Level Percentage of deduplicated Percentage of total 1 61.21329133218168 25.18460453084581 2 19.153287267554113 15.760236210185258 3 7.614825729092573 9.398761464294113 4 3.2961589269383196 5.42447283844164 5 1.775734173356366 3.6528964490083875 6 1.1584188598719642 2.8596064905542056 7 0.8815161060867799 2.5387369026155575 8 0.6630423737425059 2.182331269107157 9 0.5372929580327203 1.9894959630007054 >10 3.6048165836805204 26.030675968749183 >50 0.09018392439792704 2.3380627629275432 >100 0.0101615689462453 0.8162838702934336 >500 0.0 0.0 >1k 0.0012701961182806625 1.8238352799770061 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCCGT 3490 1.8238352799770061 No Hit TCTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCCG 350 0.18290611690313816 No Hit CTTATACACATCTCCGAGCCCACGAGACAAATACAGACCTCGTATGCCGT 284 0.14841524914426069 No Hit CTCTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCC 251 0.1311698152648219 No Hit CTTATACACATCTCCGAGCCCACGAGACAAATACAGAACTCGTATGCCGT 212 0.11078884795275795 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.225889054375376E-4 0.0 2 0.0 0.0 0.0 5.225889054375376E-4 0.0 3 0.0 0.0 0.0 5.225889054375376E-4 0.0 4 0.0 0.0 0.0 0.0010451778108750752 0.0 5 0.0 0.0 0.0 0.0010451778108750752 0.0 6 0.0 0.0 0.0 0.0010451778108750752 0.0 7 0.0 0.0 0.0 0.0010451778108750752 0.0 8 0.0 0.0 0.0 0.0010451778108750752 0.0 9 0.0 0.0 0.0 0.0015677667163126127 0.0 10 0.0 0.0 0.0 0.0020903556217501504 0.0 11 0.0 0.0 0.0 0.002612944527187688 0.0 12 0.0 0.0 0.0 0.002612944527187688 0.0 13 0.0 0.0 0.0 0.0031355334326252254 0.0 14 0.0 0.0 0.0 0.0031355334326252254 0.0 15 0.0 0.0 0.0 0.0031355334326252254 0.0 16 0.0 0.0 0.0 0.0031355334326252254 0.0 17 0.0 0.0 0.0 0.0031355334326252254 0.0 18 0.0 0.0 0.0 0.003658122338062763 0.0 19 0.0 0.0 0.0 0.004180711243500301 0.0 20 0.0 0.0 0.0 0.004703300148937838 0.0 21 0.0 0.0 0.0 0.004703300148937838 0.0 22 0.0 0.0 0.0 0.004703300148937838 0.0 23 0.0 0.0 0.0 0.007838833581563063 0.0 24 0.0 0.0 0.0 0.008361422487000602 0.0 25 0.0 0.0 0.0 0.010451778108750752 0.0 26 0.0 0.0 0.0 0.012019544825063363 0.0 27 0.0 0.0 0.0 0.022471322933814115 0.0 28 0.0 0.0 0.0 0.041284523529565464 0.0 29 0.0 0.0 0.0 0.0653236131796922 0.0 30 0.0 0.0 0.0 0.08570458049175617 0.0 31 0.0 0.0 0.0 0.10869849233100781 0.0 32 0.0 0.0 0.0 0.12960204854850932 0.0 33 0.0 0.0 0.0 0.17036398317263723 0.0 34 0.0 0.0 0.0 0.23464241854145437 0.0 35 0.0 0.0 0.0 0.31616628778971023 0.0 36 0.0 0.0 0.0 0.47816884847534685 0.0 37 0.0 0.0 0.0 0.7384181233832405 0.0 38 0.0 0.0 0.0 1.091688223459016 0.0 39 0.0 0.0 0.0 1.537979148702673 0.0 40 0.0 0.0 0.0 2.044367798071647 0.0 41 0.0 0.0 0.0 2.6124219382822504 0.0 42 0.0 0.0 0.0 3.2416189804290454 0.0 43 0.0 0.0 0.0 3.9972825376917247 0.0 44 0.0 0.0 0.0 4.83446996420266 0.0 45 0.0 0.0 0.0 5.822685584385043 0.0 46 0.0 0.0 0.0 6.78477175929555 0.0 47 0.0 0.0 0.0 7.7317028559483685 0.0 48 0.0 0.0 0.0 8.7052859867785 0.0 49 0.0 0.0 0.0 9.653262261242194 0.0 50 0.0 0.0 0.0 10.510308066159755 0.0 51 0.0 0.0 0.0 11.348018081576129 0.0 52 0.0 0.0 0.0 12.213947897886127 0.0 53 0.0 0.0 0.0 13.060541924694938 0.0 54 0.0 0.0 0.0 13.89198087324606 0.0 55 0.0 0.0 0.0 14.86660918188707 0.0 56 0.0 0.0 0.0 15.791068955606072 0.0 57 0.0 0.0 0.0 16.669540905646574 0.0 58 0.0 0.0 0.0 17.51456716573907 0.0 59 0.0 0.0 0.0 18.38258733767082 0.0 60 0.0 0.0 0.0 19.26785294348201 0.0 61 0.0 0.0 0.0 20.13848605994095 0.0 62 0.0 0.0 0.0 20.962086174910507 0.0 63 0.0 0.0 0.0 21.73185963262 0.0 64 0.0 0.0 0.0 22.527239946695932 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATG 520 0.0 56.53846 40 CGTATGC 525 0.0 56.0 41 CTCGTAT 505 0.0 55.445545 39 TATGCCG 525 0.0 55.333332 43 CCGTCTT 505 0.0 54.752476 47 GTATGCC 540 0.0 54.444447 42 GCCGTCT 525 0.0 53.333332 46 CGTCTTC 515 0.0 53.009712 48 ATGCCGT 535 0.0 52.990654 44 TCTTCTG 500 0.0 52.500004 50 TAGTTTC 20 0.0069432296 52.5 35 AGCGCTG 20 0.0069432296 52.5 61 TCTCGTA 415 0.0 52.289154 38 ATCTCGT 420 0.0 51.666668 37 CTTGAAA 545 0.0 51.37615 57 TGCCGTC 550 0.0 50.90909 45 ACAGATC 425 0.0 50.235294 33 AGATCTC 435 0.0 49.080463 35 CAGATCT 435 0.0 49.080463 34 ACTCGTA 50 6.165101E-8 48.999996 38 >>END_MODULE