##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781153_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 237700 Sequences flagged as poor quality 0 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18166596550274 34.0 34.0 34.0 27.0 34.0 2 32.46281026503997 34.0 34.0 34.0 31.0 34.0 3 32.451068573832565 34.0 34.0 34.0 31.0 34.0 4 32.568632730332354 34.0 34.0 34.0 31.0 34.0 5 32.60405973916702 34.0 34.0 34.0 31.0 34.0 6 35.7693605384939 38.0 37.0 38.0 31.0 38.0 7 35.68884728649558 38.0 37.0 38.0 31.0 38.0 8 35.643550694152296 38.0 37.0 38.0 31.0 38.0 9 35.80500631047539 38.0 37.0 38.0 31.0 38.0 10-11 35.721013883045856 38.0 37.0 38.0 31.0 38.0 12-13 35.67246318889356 38.0 37.0 38.0 31.0 38.0 14-15 35.592978544383676 38.0 37.0 38.0 31.0 38.0 16-17 35.58455826672276 38.0 37.0 38.0 31.0 38.0 18-19 35.60513462347497 38.0 37.0 38.0 31.0 38.0 20-21 35.570936053849394 38.0 36.5 38.0 31.0 38.0 22-23 35.60876314682373 38.0 37.0 38.0 31.0 38.0 24-25 35.61427429533025 38.0 37.0 38.0 31.0 38.0 26-27 35.548413967185525 38.0 37.0 38.0 31.0 38.0 28-29 35.63928060580564 38.0 37.0 38.0 31.0 38.0 30-31 35.70443626419857 38.0 37.0 38.0 31.0 38.0 32-33 35.66952881783761 38.0 37.0 38.0 31.0 38.0 34-35 35.68724021876315 38.0 37.0 38.0 31.0 38.0 36-37 35.60404501472445 38.0 37.0 38.0 31.0 38.0 38-39 35.59224863273033 38.0 37.0 38.0 31.0 38.0 40-41 35.583474968447625 38.0 37.0 38.0 31.0 38.0 42-43 35.65768615902398 38.0 37.0 38.0 31.0 38.0 44-45 35.66042911232647 38.0 37.0 38.0 31.0 38.0 46-47 35.629324779133356 38.0 37.0 38.0 31.0 38.0 48-49 35.5970929743374 38.0 37.0 38.0 31.0 38.0 50-51 35.53106226335717 38.0 36.5 38.0 31.0 38.0 52-53 35.57548801009676 38.0 37.0 38.0 31.0 38.0 54-55 35.542252839713925 38.0 37.0 38.0 31.0 38.0 56-57 35.464995793016406 38.0 36.0 38.0 31.0 38.0 58-59 35.473224652923854 38.0 36.0 38.0 31.0 38.0 60-61 35.48387673538073 38.0 36.0 38.0 31.0 38.0 62-63 35.45950147244426 38.0 36.0 38.0 31.0 38.0 64-65 35.48027555742533 38.0 36.0 38.0 31.0 38.0 66-67 35.384156499789654 38.0 36.0 38.0 30.5 38.0 68-69 35.138944047118216 38.0 36.0 38.0 27.5 38.0 70-71 35.34040176693311 38.0 36.0 38.0 30.0 38.0 72-73 35.35665544804375 38.0 36.0 38.0 30.5 38.0 74-75 35.38754312158183 38.0 36.0 38.0 30.5 38.0 76 34.30640302902819 37.0 34.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 14.0 14 70.0 15 157.0 16 287.0 17 452.0 18 567.0 19 675.0 20 721.0 21 859.0 22 935.0 23 1192.0 24 1397.0 25 1750.0 26 2068.0 27 2543.0 28 3075.0 29 3784.0 30 4623.0 31 5846.0 32 7637.0 33 10304.0 34 14370.0 35 21861.0 36 39802.0 37 112709.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.59150189314262 19.15271350441733 9.406394615061 24.849389987379052 2 22.179638199411023 21.99537231804796 32.125788809423646 23.699200673117375 3 19.348758939840135 22.965502734539335 30.655027345393353 27.03071098022718 4 13.379890618426588 17.469078670593184 37.80521665965503 31.3458140513252 5 13.207404291123265 34.09465713083719 36.55363904080774 16.144299537231806 6 28.36095919225915 38.10138830458561 19.715607909129155 13.822044594026083 7 27.122843920908707 30.971813209928484 23.014724442574675 18.890618426588134 8 24.301640723601178 36.040807740849814 20.896508203618005 18.761043331931006 9 24.005469078670593 17.179217501051745 22.304585612116114 36.51072780816155 10-11 24.068573832562056 25.416701724863273 28.79764408918805 21.717080353386624 12-13 24.586453512831298 23.953723180479596 27.758098443416067 23.701724863273032 14-15 22.456247370635253 25.022507362221287 25.00462768195204 27.516617585191415 16-17 22.22885990744636 28.369793857803955 26.0187210769878 23.382625157761886 18-19 21.739587715607907 28.06899453092133 27.66596550273454 22.525452250736222 20-21 21.872107698779974 28.114219604543543 27.68700042069836 22.326672275978122 22-23 21.640933950357592 27.839293226756418 28.023979806478756 22.495793016407237 24-25 21.803533866217922 27.863904080774084 27.683214135464873 22.64934791754312 26-27 21.526293647454775 27.70866638620109 27.744846445098865 23.020193521245265 28-29 21.683634833824147 27.532183424484646 28.28165755153555 22.50252419015566 30-31 21.663230963399243 28.03176272612537 27.942364324779135 22.362641985696253 32-33 21.2433740008414 28.182162389566678 28.027555742532606 22.546907867059318 34-35 21.727597812368533 27.59381573411864 28.24968447623054 22.42890197728229 36-37 22.03849389987379 27.722549432057214 27.627471602860748 22.611485065208246 38-39 21.495793016407237 28.058056373580143 27.98359276398822 22.4625578460244 40-41 21.401766933108963 27.741270509045012 28.358435002103494 22.49852755574253 42-43 21.260201935212454 27.816996213714766 28.31320992848128 22.609591922591502 44-45 21.285443836769037 27.696466133782078 28.113588557004626 22.90450147244426 46-47 21.520193521245268 27.675431215818257 28.19267984854859 22.611695414387885 48-49 21.18426588136306 27.65502734539335 28.53618005889777 22.624526714345812 50-51 21.181741691207403 27.555111485065208 28.520403870424904 22.742742953302482 52-53 21.118847286495583 27.456457719814892 28.599705511148503 22.82498948254102 54-55 20.987799747580986 27.566259991586033 28.726966764829616 22.71897349600337 56-57 20.9135464871687 27.449726546066472 28.634623474968446 23.002103491796383 58-59 20.84665544804375 27.3199411022297 28.801220025241903 23.032183424484646 60-61 20.885990744636096 27.496213714766508 28.448254101809 23.16954143878839 62-63 20.42385359697097 27.339713925115696 28.915229280605804 23.32120319730753 64-65 20.775978123685316 27.30269246949937 28.739167017248633 23.18216238956668 66-67 20.683003786285234 27.194783340344976 28.446150610012623 23.676062263357174 68-69 20.554690786705933 27.069415229280608 28.481278923012198 23.89461506100126 70-71 20.980858224652923 27.245477492637775 28.49347917543121 23.280185107278083 72-73 20.959823306689103 27.10433319310055 28.195204038704247 23.7406394615061 74-75 20.780395456457722 27.078460244005047 28.25031552376946 23.890828775767776 76 20.86705931846866 27.113167858645355 28.060580563735805 23.95919225915019 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.5 3 0.5 4 0.0 5 0.5 6 0.5 7 0.0 8 0.0 9 0.5 10 1.0 11 3.5 12 6.0 13 9.5 14 27.5 15 78.5 16 171.5 17 228.0 18 299.0 19 427.0 20 660.5 21 837.0 22 1017.5 23 1401.5 24 1825.5 25 2046.0 26 2315.5 27 2905.0 28 3632.0 29 4039.0 30 4459.5 31 5260.0 32 6299.5 33 6959.0 34 7284.0 35 8029.0 36 9011.5 37 9574.0 38 10049.5 39 11058.5 40 11983.5 41 12497.5 42 12620.0 43 12455.0 44 12359.5 45 12149.0 46 11869.0 47 11654.5 48 10844.5 49 9779.0 50 9309.0 51 8732.0 52 7608.5 53 6659.0 54 6256.0 55 6058.0 56 5522.0 57 4850.0 58 4516.0 59 4081.5 60 3443.0 61 2914.0 62 2589.0 63 2392.0 64 2052.5 65 1821.5 66 1604.0 67 1475.0 68 1411.0 69 1276.0 70 1150.0 71 1095.0 72 1062.5 73 955.5 74 812.5 75 744.0 76 712.5 77 635.5 78 540.5 79 491.0 80 429.0 81 308.5 82 222.0 83 194.0 84 169.5 85 113.0 86 70.0 87 59.0 88 45.5 89 32.5 90 25.5 91 15.0 92 12.0 93 10.5 94 5.5 95 1.5 96 1.0 97 1.0 98 1.0 99 2.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 237700.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.43838978461132 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14473837122114 54.95683192421937 2 14.035743157334105 19.492388085513134 3 3.304310681889392 6.883380392954713 4 1.1210430501346158 3.1137369712230805 5 0.5665673304826544 1.9670761566640624 6 0.40278757055088027 1.678135219458519 7 0.2914859104545994 1.4168218586808148 8 0.2073202193175667 1.1516785759363442 9 0.1626485456689512 1.016464780085471 >10 0.7597030929684563 8.167525812207987 >50 0.0036520699776455712 0.15596022305648438 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.002524190155658393 0.0 2 0.0 0.0 0.0 0.002524190155658393 0.0 3 0.0 0.0 0.0 0.002524190155658393 0.0 4 0.0 0.0 0.0 0.002524190155658393 0.0 5 0.0 0.0 0.0 0.002524190155658393 0.0 6 0.0 0.0 0.0 0.002944888514934792 0.0 7 0.0 0.0 0.0 0.002944888514934792 0.0 8 0.0 0.0 0.0 0.002944888514934792 0.0 9 0.0 0.0 0.0 0.0033655868742111907 0.0 10 0.0 0.0 0.0 0.0037862852334875894 0.0 11 0.0 0.0 0.0 0.0037862852334875894 0.0 12 0.0 0.0 0.0 0.0037862852334875894 0.0 13 0.0 0.0 0.0 0.0037862852334875894 0.0 14 0.0 0.0 0.0 0.005469078670593185 0.0 15 0.0 0.0 0.0 0.006310475389145982 0.0 16 0.0 0.0 0.0 0.006310475389145982 0.0 17 0.0 0.0 0.0 0.006310475389145982 0.0 18 0.0 0.0 0.0 0.006310475389145982 0.0 19 0.0 0.0 0.0 0.006310475389145982 0.0 20 0.0 0.0 0.0 0.006731173748422381 0.0 21 0.0 0.0 0.0 0.006731173748422381 0.0 22 0.0 0.0 0.0 0.00715187210769878 0.0 23 0.0 0.0 0.0 0.00715187210769878 0.0 24 0.0 0.0 0.0 0.008413967185527976 0.0 25 0.0 0.0 0.0 0.008413967185527976 0.0 26 0.0 0.0 0.0 0.008834665544804375 0.0 27 0.0 0.0 0.0 0.010096760622633571 0.0 28 0.0 0.0 0.0 0.014724442574673959 0.0 29 0.0 0.0 0.0 0.018931426167437947 0.0 30 0.0 0.0 0.0 0.026924694993689526 0.0 31 0.0 0.0 0.0 0.03323517038283551 0.0 32 0.0 0.0 0.0 0.04122843920908709 0.0 33 0.0 0.0 0.0 0.04880100967606226 0.0 34 0.0 0.0 0.0 0.05931846865797223 0.0 35 0.0 0.0 0.0 0.07909129154396298 0.0 36 0.0 0.0 0.0 0.11442995372318047 0.0 37 0.0 0.0 0.0 0.1800588977702987 0.0 38 0.0 0.0 0.0 0.27471602860748845 0.0 39 0.0 0.0 0.0 0.4164913756836348 0.0 40 0.0 0.0 0.0 0.5818258308792595 0.0 41 0.0 0.0 0.0 0.7480016827934372 0.0 42 0.0 0.0 0.0 0.9255363904080774 0.0 43 0.0 0.0 0.0 1.106436684896929 0.0 44 0.0 0.0 0.0 1.3020614219604543 0.0 45 0.0 0.0 0.0 1.5473285654185949 0.0 46 0.0 0.0 0.0 1.8254101809002945 0.0 47 0.0 0.0 0.0 2.1438788388725283 0.0 48 0.0 0.0 0.0 2.4976861590239796 0.0 49 0.0 0.0 0.0 2.833403449726546 0.0 50 0.0 0.0 0.0 3.1931005469078673 0.0 51 0.0 0.0 0.0 3.5111485065208248 0.0 52 0.0 0.0 0.0 3.8287757677745056 0.0 53 0.0 0.0 0.0 4.139251156920488 0.0 54 0.0 0.0 0.0 4.46613378207825 0.0 55 0.0 0.0 0.0 4.802271771140092 0.0 56 0.0 0.0 0.0 5.153975599495162 0.0 57 0.0 0.0 0.0 5.48590660496424 0.0 58 0.0 0.0 0.0 5.86916281026504 0.0 59 0.0 0.0 0.0 6.2406394615061 0.0 60 0.0 0.0 0.0 6.659655027345393 0.0 61 0.0 0.0 0.0 7.053849389987379 0.0 62 0.0 0.0 0.0 7.425746739587716 0.0 63 0.0 0.0 0.0 7.790492217080353 0.0 64 0.0 0.0 0.0 8.135044173327724 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTC 60 1.2124989E-5 35.0 6 TCGTTGT 40 0.0024155874 35.0 34 TTAGAGT 60 1.2124989E-5 35.0 4 GATCAAG 40 0.0024155874 35.0 11 CAATCGC 40 0.0024155874 35.0 48 TCAATCG 45 0.0043016556 31.111109 47 GGTACTA 50 0.007199049 27.999998 1 GACGTAA 50 0.007199049 27.999998 68 CCATCGT 50 0.007199049 27.999998 31 CTCGGGA 50 0.007199049 27.999998 12 CATCGTT 50 0.007199049 27.999998 32 GCGTAGC 50 0.007199049 27.999998 24 AGACGTA 65 7.9406775E-4 26.923077 67 TCTACAC 110 1.0112326E-6 25.454544 3 GGTCCTA 70 0.0012236935 25.000002 1 CCCCAAT 70 0.0012236935 25.000002 66 CTGTGCA 100 1.3927025E-5 24.499998 9 GGTCCAA 75 0.0018287762 23.333334 1 GAGACGT 75 0.0018287762 23.333334 66 TATACAG 75 0.0018287762 23.333334 5 >>END_MODULE