##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781152_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 810398 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.399997285284513 34.0 32.0 34.0 23.0 34.0 2 31.477037208877615 34.0 33.0 34.0 23.0 34.0 3 31.410297162628734 34.0 33.0 34.0 23.0 34.0 4 31.602363283226268 34.0 33.0 34.0 23.0 34.0 5 31.69805453616618 34.0 34.0 34.0 23.0 34.0 6 34.54848975441696 38.0 35.0 38.0 26.0 38.0 7 34.39109918830007 37.0 34.0 38.0 24.0 38.0 8 34.1658197576993 37.0 34.0 38.0 24.0 38.0 9 34.48712114294458 37.0 34.0 38.0 26.0 38.0 10-11 34.36013600724582 37.5 34.0 38.0 24.5 38.0 12-13 34.323243640778976 37.0 34.0 38.0 24.0 38.0 14-15 34.22194896828472 37.0 34.0 38.0 24.0 38.0 16-17 34.19030649137831 37.0 34.0 38.0 24.0 38.0 18-19 34.257108235706404 37.0 34.0 38.0 24.0 38.0 20-21 34.19981910123174 37.0 34.0 38.0 24.0 38.0 22-23 34.264302848723716 37.0 34.0 38.0 24.5 38.0 24-25 34.26176212182162 37.0 34.0 38.0 24.0 38.0 26-27 34.18316864059388 37.0 34.0 38.0 24.0 38.0 28-29 34.28482548081313 37.0 34.0 38.0 24.0 38.0 30-31 34.36567957966332 37.0 34.0 38.0 25.0 38.0 32-33 34.31175669239065 37.0 34.0 38.0 24.5 38.0 34-35 34.34534697765789 37.0 34.0 38.0 24.5 38.0 36-37 34.20351173127278 37.0 34.0 38.0 24.0 38.0 38-39 34.21074829898396 37.0 34.0 38.0 24.0 38.0 40-41 34.190331170609994 37.0 34.0 38.0 24.0 38.0 42-43 34.28073119627639 37.0 34.0 38.0 24.0 38.0 44-45 34.29286967638124 37.0 34.0 38.0 24.0 38.0 46-47 34.26568241777497 37.0 34.0 38.0 24.0 38.0 48-49 34.24006352434236 37.0 34.0 38.0 24.0 38.0 50-51 34.11412725599027 37.0 34.0 38.0 24.0 38.0 52-53 34.19621469944397 37.0 34.0 38.0 24.0 38.0 54-55 34.1593957536914 37.0 34.0 38.0 24.0 38.0 56-57 34.11801917082717 37.0 34.0 38.0 24.0 38.0 58-59 34.12201658937954 37.0 34.0 38.0 24.0 38.0 60-61 34.10093188778847 37.0 34.0 38.0 24.0 38.0 62-63 34.07430854962623 37.0 34.0 38.0 24.0 38.0 64-65 34.096228026229085 37.0 34.0 38.0 24.0 38.0 66-67 33.981572017699946 37.0 34.0 38.0 24.0 38.0 68-69 33.798685954308866 37.0 34.0 38.0 23.5 38.0 70-71 33.96408863299268 37.0 34.0 38.0 24.0 38.0 72-73 33.950531714046676 37.0 34.0 38.0 24.0 38.0 74-75 33.96467229682206 37.0 34.0 38.0 24.0 38.0 76 32.75975631726633 37.0 31.0 38.0 21.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 6.0 13 48.0 14 144.0 15 451.0 16 1086.0 17 2231.0 18 3413.0 19 4434.0 20 5320.0 21 6160.0 22 7470.0 23 8801.0 24 10253.0 25 12137.0 26 14257.0 27 16768.0 28 19617.0 29 23305.0 30 27558.0 31 32654.0 32 39476.0 33 47310.0 34 60067.0 35 78306.0 36 119853.0 37 269271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.98729019568163 17.62220538550194 8.577883953316766 23.812620465499666 2 23.91874116175015 22.323228833239963 30.180602617479312 23.577427387530573 3 19.57618355425359 22.92910397113517 30.671966120350742 26.822746354260502 4 13.745221483764766 17.54927825586934 37.787358803945715 30.91814145642018 5 13.61701287515517 33.01834407291232 36.76625559293088 16.598387459001625 6 28.39382624340139 38.17901821080506 19.73141592155953 13.695739624234019 7 27.639135338438642 31.33188877563864 22.38480351629693 18.64417236962579 8 24.823605191523175 35.575482664073704 20.998941260960663 18.601970883442455 9 24.626664922667626 17.877512037295254 21.889491336355714 35.6063317036814 10-11 24.32428263643296 25.1182135197767 28.39543039346099 22.162073450329345 12-13 25.01382036974425 23.6424571630236 27.79831638281437 23.54540608441778 14-15 22.95057490270213 24.395975804481253 25.06533826588911 27.588111026927507 16-17 22.956374522148376 28.10199432871256 25.65295077233656 23.28868037680251 18-19 22.071994254674863 27.65671929101503 27.45354751615873 22.81773893815138 20-21 22.323599021715257 27.799488646319464 27.365689451356 22.51122288060928 22-23 22.429102737173586 27.48593900774681 27.631978361249658 22.452979893829944 24-25 22.43292801808494 27.537580300050095 27.316022497587607 22.713469184277354 26-27 22.096488392123376 27.30146175089277 27.442565258058387 23.159484598925467 28-29 22.124252527770306 27.4085696164107 27.86507370452543 22.602104151293563 30-31 22.284605835651124 27.56670179343977 27.725636045498632 22.423056325410478 32-33 21.879866435998114 27.94324517089134 27.6662207952142 22.51066759789634 34-35 22.189220605184122 27.3043615606159 28.121429223665405 22.384988610534577 36-37 22.578720579270925 27.361987566603073 27.29720458342691 22.762087270699087 38-39 22.190269472530783 27.5804604651048 27.727055101320587 22.502214961043833 40-41 22.107902536778226 27.047018872208472 28.217122944528487 22.627955646484814 42-43 21.826682691714442 27.268514976591753 28.19830503036779 22.706497301326014 44-45 21.822117033852503 27.03720887761322 28.296590070557926 22.84408401797635 46-47 21.838960609478306 27.2166268919716 28.2191589811426 22.725253517407495 48-49 21.51072682805239 26.95718646887085 28.5934195296632 22.938667173413556 50-51 21.633704447508784 27.005265934310014 28.402111309573385 22.958918308607814 52-53 21.337972206249276 26.804792213208817 28.763150945584766 23.09408463495714 54-55 21.0223248329833 27.160111451410295 28.75099642397933 23.066567291627077 56-57 21.11009857520362 26.822549208936614 28.840018435420195 23.227333780439572 58-59 21.096635352796223 26.7623769584537 28.6915548798922 23.449432808857882 60-61 21.00297755297712 26.8174117130246 28.584940467449904 23.59467026654837 62-63 20.793574013724136 26.817596807490652 28.643306922409632 23.74552225637558 64-65 20.861477940468756 26.673005116004727 28.653081572264494 23.812435371262023 66-67 21.029988369904892 26.505757976795337 28.343498098155536 24.120755555144235 68-69 21.116885376479292 26.57112907076968 28.10093577649953 24.2110497762515 70-71 21.49150354702695 26.72683882097293 27.88620885812756 23.89544877387256 72-73 21.404817638762236 26.503491498611176 27.977090240955977 24.11460062167061 74-75 21.234160541068142 26.661006889216026 27.960616833477914 24.144215736237918 76 21.33815730048692 26.625435896929655 27.465023358892793 24.57138344369063 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.5 2 0.5 3 0.0 4 0.0 5 0.0 6 0.5 7 1.0 8 1.0 9 2.0 10 3.0 11 5.5 12 8.0 13 18.0 14 38.0 15 92.0 16 212.0 17 288.0 18 410.5 19 692.5 20 1157.0 21 1462.0 22 1888.5 23 2914.5 24 4254.0 25 4994.0 26 5927.5 27 7878.5 28 10221.5 29 11547.0 30 12796.0 31 15496.5 32 18939.0 33 20930.0 34 22849.0 35 26794.5 36 31028.5 37 33236.0 38 34962.5 39 38140.0 40 40908.5 41 42827.5 42 43429.0 43 43573.5 44 43436.5 45 42629.0 46 42103.0 47 41155.5 48 38683.5 49 35440.0 50 33721.0 51 32111.5 52 28782.0 53 25903.0 54 24744.0 55 23356.5 56 20700.5 57 17995.0 58 16558.0 59 15231.5 60 12469.0 61 10199.0 62 9365.0 63 8551.5 64 7098.5 65 5965.5 66 5215.5 67 4959.0 68 4633.5 69 4082.5 70 3683.0 71 3509.0 72 3271.5 73 2872.0 74 2596.0 75 2482.0 76 2351.0 77 1981.5 78 1553.5 79 1364.0 80 1274.5 81 1010.5 82 722.5 83 609.0 84 522.0 85 362.5 86 210.0 87 130.0 88 115.0 89 74.0 90 39.0 91 27.0 92 24.0 93 18.0 94 9.0 95 6.5 96 7.0 97 6.0 98 4.5 99 9.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 6.169807921539786E-5 52-53 0.0 54-55 0.0 56-57 1.850942376461936E-4 58-59 1.2339615843079573E-4 60-61 1.2339615843079573E-4 62-63 1.2339615843079573E-4 64-65 0.0 66-67 6.169807921539786E-5 68-69 1.850942376461936E-4 70-71 1.2339615843079573E-4 72-73 1.2339615843079573E-4 74-75 1.2339615843079573E-4 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 810398.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.962349693632966 #Duplication Level Percentage of deduplicated Percentage of total 1 71.51507252045417 43.59726859357448 2 17.533870565058905 21.378118977400376 3 6.250830414184164 11.431959287552745 4 2.112739014733647 5.151901385102967 5 0.7323761252292718 2.23236847267474 6 0.3627145284713019 1.326715795417722 7 0.21669395790664187 0.9247120986881457 8 0.15911827046105745 0.7760178917194444 9 0.12489752627150336 0.6852642005189787 >10 0.9496211277711951 10.773567201106623 >50 0.039018010080155395 1.5178394691598023 >100 0.003047939377974325 0.20426662708389193 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.4679231686159145E-4 0.0 2 0.0 0.0 0.0 2.4679231686159145E-4 0.0 3 0.0 0.0 0.0 2.4679231686159145E-4 0.0 4 0.0 0.0 0.0 0.0011105654258771617 0.0 5 0.0 1.2339615843079573E-4 0.0 0.0012339615843079573 0.0 6 0.0 1.2339615843079573E-4 0.0 0.001357357742738753 0.0 7 0.0 1.2339615843079573E-4 0.0 0.0014807539011695487 0.0 8 0.0 1.2339615843079573E-4 0.0 0.0014807539011695487 0.0 9 0.0 1.2339615843079573E-4 0.0 0.0017275462180311402 0.0 10 0.0 1.2339615843079573E-4 0.0 0.001850942376461936 0.0 11 0.0 1.2339615843079573E-4 0.0 0.0024679231686159145 0.0 12 0.0 1.2339615843079573E-4 0.0 0.0030849039607698933 0.0 13 0.0 1.2339615843079573E-4 0.0 0.003208300119200689 0.0 14 0.0 1.2339615843079573E-4 0.0 0.003208300119200689 0.0 15 0.0 1.2339615843079573E-4 0.0 0.003578488594493076 0.0 16 0.0 1.2339615843079573E-4 0.0 0.003578488594493076 0.0 17 0.0 1.2339615843079573E-4 0.0 0.003948677069785463 0.0 18 0.0 1.2339615843079573E-4 0.0 0.004195469386647055 0.0 19 0.0 1.2339615843079573E-4 0.0 0.004935846337231829 0.0 20 0.0 1.2339615843079573E-4 0.0 0.005552827129385808 0.0 21 0.0 1.2339615843079573E-4 0.0 0.005676223287816604 0.0 22 0.0 1.2339615843079573E-4 0.0 0.0070335810305553565 0.0 23 0.0 1.2339615843079573E-4 0.0 0.007650561822709336 0.0 24 0.0 1.2339615843079573E-4 0.0 0.007897354139570927 0.0 25 0.0 1.2339615843079573E-4 0.0 0.008637731090155702 0.0 26 0.0 1.2339615843079573E-4 0.0 0.00950150419917127 0.0 27 0.0 1.2339615843079573E-4 0.0 0.012956596635233552 0.0 28 0.0 1.2339615843079573E-4 0.0 0.01900300839834254 0.0 29 0.0 1.2339615843079573E-4 0.0 0.03097243576612973 0.0 30 0.0 1.2339615843079573E-4 0.0 0.044422617035086466 0.0 31 0.0 1.2339615843079573E-4 0.0 0.05885996757148956 0.0 32 0.0 1.2339615843079573E-4 0.0 0.07280373347416948 0.0 33 0.0 1.2339615843079573E-4 0.0 0.08995579949605009 0.0 34 0.0 1.2339615843079573E-4 0.0 0.11981766983630265 0.0 35 0.0 1.2339615843079573E-4 0.0 0.15461538651378706 0.0 36 0.0 1.2339615843079573E-4 0.0 0.21619006957075412 0.0 37 0.0 1.2339615843079573E-4 0.0 0.33292283544628687 0.0 38 0.0 1.2339615843079573E-4 0.0 0.4991374608525687 0.0 39 0.0 1.2339615843079573E-4 0.0 0.7086641378680599 0.0 40 0.0 1.2339615843079573E-4 0.0 0.9581711702151289 0.0 41 0.0 1.2339615843079573E-4 0.0 1.2140948028005991 0.0 42 0.0 1.2339615843079573E-4 0.0 1.4765584317829017 0.0 43 0.0 1.2339615843079573E-4 0.0 1.7504979034992683 0.0 44 0.0 1.2339615843079573E-4 0.0 2.0357898217912678 0.0 45 0.0 1.2339615843079573E-4 0.0 2.375499445951249 0.0 46 0.0 1.2339615843079573E-4 0.0 2.760742252572193 0.0 47 0.0 1.2339615843079573E-4 0.0 3.177574475751421 0.0 48 0.0 1.2339615843079573E-4 0.0 3.645122520045706 0.0 49 0.0 1.2339615843079573E-4 0.0 4.131426780421472 0.0 50 0.0 1.2339615843079573E-4 0.0 4.636980841512442 0.0 51 0.0 1.2339615843079573E-4 0.0 5.087993800577 0.0 52 0.0 1.2339615843079573E-4 0.0 5.511489416311491 0.0 53 0.0 1.2339615843079573E-4 0.0 5.910799384993546 0.0 54 0.0 1.2339615843079573E-4 0.0 6.319610857874773 0.0 55 0.0 1.2339615843079573E-4 0.0 6.736196288737139 0.0 56 0.0 1.2339615843079573E-4 0.0 7.174005858849602 0.0 57 0.0 1.2339615843079573E-4 0.0 7.588987139652368 0.0 58 0.0 1.2339615843079573E-4 0.0 8.015814451664491 0.0 59 0.0 1.2339615843079573E-4 0.0 8.480524384314867 0.0 60 0.0 1.2339615843079573E-4 0.0 8.974725998830204 0.0 61 0.0 1.2339615843079573E-4 0.0 9.461523843839693 0.0 62 0.0 1.2339615843079573E-4 0.0 9.898716433160002 0.0 63 0.0 1.2339615843079573E-4 0.0 10.305800359823198 0.0 64 0.0 1.2339615843079573E-4 0.0 10.71695635971461 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 40 0.0024190133 35.0 43 GTCGTTG 60 4.9830094E-4 29.166668 1 GCGGGTA 85 3.9571005E-6 28.82353 9 CGTTCAT 90 1.9281899E-4 23.333332 58 CGGGTAG 110 2.922086E-5 22.272728 10 GTACCGT 100 3.9322497E-4 21.0 11 TCAACCG 85 0.0037898135 20.588236 25 GCTTCTA 325 0.0 20.461538 1 ACTCGCA 90 0.005275549 19.444443 21 TGAAGCG 145 1.1165039E-5 19.310345 41 CGAACAG 165 1.5919686E-6 19.09091 46 ATCGTCC 165 1.5919686E-6 19.09091 29 AGCGAAC 150 1.4955836E-5 18.666666 44 GCGTTTG 95 0.007208814 18.421051 19 TATCCGA 95 0.007208814 18.421051 2 TCGCCAG 115 0.0010076684 18.26087 41 TTAATAC 230 6.0699676E-9 18.26087 3 TCGTCCC 135 1.4117912E-4 18.148148 30 TAGTACC 175 2.7941187E-6 18.0 4 TCGTTCA 120 0.0013406054 17.500002 57 >>END_MODULE