##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781152_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 724870 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.29340985280119 34.0 34.0 34.0 33.0 34.0 2 33.32639231862265 34.0 34.0 34.0 33.0 34.0 3 33.41156069364162 34.0 34.0 34.0 34.0 34.0 4 33.46617876308856 34.0 34.0 34.0 34.0 34.0 5 33.46522548870832 34.0 34.0 34.0 34.0 34.0 6 36.92188668312939 38.0 37.0 38.0 35.0 38.0 7 36.84498323837378 38.0 37.0 38.0 34.0 38.0 8 36.63689351194007 38.0 37.0 38.0 34.0 38.0 9 36.5871811497234 38.0 37.0 38.0 34.0 38.0 10-11 36.53032750700125 38.0 37.0 38.0 34.0 38.0 12-13 36.46887993709217 38.0 37.0 38.0 34.0 38.0 14-15 36.4859809345124 38.0 37.0 38.0 34.0 38.0 16-17 36.43903044683874 38.0 37.0 38.0 34.0 38.0 18-19 36.44595858567743 38.0 37.0 38.0 34.0 38.0 20-21 36.38706043842345 38.0 37.0 38.0 34.0 38.0 22-23 36.427710486018185 38.0 37.0 38.0 34.0 38.0 24-25 36.424941023907735 38.0 37.0 38.0 34.0 38.0 26-27 36.24206547380909 38.0 37.0 38.0 34.0 38.0 28-29 36.22010774345745 38.0 37.0 38.0 34.0 38.0 30-31 36.250126229530814 38.0 37.0 38.0 34.0 38.0 32-33 36.214453626167455 38.0 37.0 38.0 34.0 38.0 34-35 36.2254680149544 38.0 37.0 38.0 34.0 38.0 36-37 36.1966952694966 38.0 37.0 38.0 34.0 38.0 38-39 36.18408542221364 38.0 37.0 38.0 34.0 38.0 40-41 36.1938402748079 38.0 37.0 38.0 34.0 38.0 42-43 36.181891235669845 38.0 37.0 38.0 34.0 38.0 44-45 36.15121401078814 38.0 37.0 38.0 34.0 38.0 46-47 36.16937726764799 38.0 37.0 38.0 34.0 38.0 48-49 36.16424945162581 38.0 37.0 38.0 34.0 38.0 50-51 36.093327079338366 38.0 37.0 38.0 33.5 38.0 52-53 36.121067915626256 38.0 37.0 38.0 34.0 38.0 54-55 36.11929104529088 38.0 37.0 38.0 34.0 38.0 56-57 36.058896767696275 38.0 37.0 38.0 32.0 38.0 58-59 36.07946666298785 38.0 37.0 38.0 33.0 38.0 60-61 36.08591540552099 38.0 37.0 38.0 33.5 38.0 62-63 36.05497537489481 38.0 37.0 38.0 32.5 38.0 64-65 36.00086222357112 38.0 37.0 38.0 32.0 38.0 66-67 35.995817870790624 38.0 37.0 38.0 32.0 38.0 68-69 35.96267123760123 38.0 37.0 38.0 32.0 38.0 70-71 35.912903693076004 38.0 37.0 38.0 32.0 38.0 72-73 35.867204464248765 38.0 37.0 38.0 32.0 38.0 74-75 35.87514588822823 38.0 37.0 38.0 32.0 38.0 76 35.08777573909804 38.0 35.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 3.0 20 7.0 21 26.0 22 88.0 23 181.0 24 354.0 25 757.0 26 1414.0 27 2646.0 28 4625.0 29 7749.0 30 12109.0 31 18495.0 32 27162.0 33 39218.0 34 54778.0 35 78563.0 36 123599.0 37 353094.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.219998068619205 17.124036034047485 8.785989211858677 24.869976685474636 2 24.251383006608084 22.581428394056864 29.589857491688164 23.577331107646888 3 20.30322678549257 22.848372811676576 30.806489439485702 26.04191096334515 4 14.109702429401134 18.15111675196932 36.99035689158056 30.748823927048992 5 13.511664160470152 32.98425924648558 36.839019410377034 16.665057182667237 6 28.89373266930622 38.34411687612951 19.45728199539228 13.30486845917199 7 27.514864734366164 31.70968587470857 21.766523652517 19.008925738408266 8 24.728847931353208 36.32361664850249 20.668119800791864 18.279415619352434 9 24.360368065998042 18.24120187068026 21.400389035275293 35.99804102804641 10-11 23.95788210299778 25.69260695021176 28.2878309214066 22.06168002538386 12-13 24.704084870390552 23.951536137514314 27.721522479892947 23.622856512202187 14-15 22.665650392484167 24.34684840040283 24.97185702263854 28.015644184474457 16-17 23.071378316111854 28.403437857822784 25.31040048560432 23.214783340461047 18-19 22.319243450549752 27.675376274366435 27.114241174279524 22.89113910080428 20-21 22.122173631133858 27.825817043055995 27.056092816642984 22.99591650916716 22-23 22.109481700166928 27.973567674203647 27.271165864223928 22.645784761405494 24-25 22.61101990701781 27.809676217804576 27.04871218287417 22.530591692303446 26-27 22.29668768192917 27.685653979334223 27.096031012457406 22.921627326279197 28-29 22.382910039041484 27.32076096403493 27.562114586063707 22.73421441085988 30-31 22.40215486914895 27.53355774138811 27.758011781422876 22.306275608040064 32-33 21.598838412404984 28.1369762854029 27.591637121138962 22.672548181053152 34-35 22.02119000648392 27.231434602066578 28.49531640156166 22.25205898988784 36-37 22.242057196462813 27.688826962075957 27.570184998689417 22.49893084277181 38-39 21.864886117510725 27.59777615296536 27.80926235049043 22.728075379033484 40-41 21.830259218894422 26.950625629423207 28.379295597831334 22.839819553851033 42-43 22.062093892698 27.101135375998453 28.190503124698225 22.64626760660532 44-45 21.617255507884174 27.450163477589086 28.422130864844732 22.51045014968201 46-47 22.05374756852953 26.999461972491616 27.966600907748973 22.980189551229877 48-49 21.688302730144716 26.858747085684332 28.19705602383876 23.255894160332197 50-51 21.36320995488846 26.84502048643205 28.649344020307087 23.142425538372397 52-53 20.96582835542925 26.737414984755887 29.27490446562832 23.021852194186543 54-55 20.755583759846594 26.973250375929474 28.947190530715854 23.323975333508077 56-57 20.994799067418985 26.747968601266436 28.648792197221574 23.60844013409301 58-59 20.631492543490555 26.600011036461712 29.27145557134383 23.497040848703907 60-61 20.917543835446356 27.18494350711162 28.192227571840466 23.705285085601556 62-63 20.344406583249413 27.48106557037814 28.242443472622675 23.932084373749777 64-65 20.28653413715563 27.478168499179162 28.102487342557975 24.132810021107236 66-67 20.328127802226607 27.277856719135844 27.921420392622124 24.47259508601542 68-69 20.514161159932126 27.61915929752921 27.5343164981307 24.332363044407963 70-71 20.964655731372524 27.325727371804597 27.187495688882144 24.522121207940735 72-73 20.790279636348586 26.974078110557752 27.312483617752147 24.92315863534151 74-75 20.800281429773616 26.83253548912219 27.32538248237615 25.04180059872805 76 20.931201456812946 26.903030888297213 26.983735014554334 25.18203264033551 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 1.5 11 5.0 12 7.0 13 14.0 14 29.0 15 64.5 16 182.0 17 272.0 18 375.5 19 666.5 20 1109.5 21 1365.0 22 1763.0 23 2742.0 24 3892.5 25 4462.0 26 5413.5 27 7147.0 28 9212.0 29 10495.0 30 11677.5 31 14188.5 32 17174.5 33 18832.0 34 20408.5 35 23746.0 36 27421.0 37 29335.0 38 30715.0 39 34021.5 40 37563.0 41 39303.5 42 39429.0 43 39329.0 44 38877.0 45 37847.0 46 37169.0 47 36281.0 48 33766.5 49 31120.0 50 30100.0 51 28577.0 52 25211.5 53 22619.0 54 21869.0 55 20703.5 56 18628.5 57 16354.0 58 14989.0 59 13546.5 60 11130.5 61 9308.0 62 8459.0 63 7658.5 64 6378.5 65 5359.0 66 4630.0 67 4441.0 68 4211.5 69 3718.0 70 3303.5 71 3153.0 72 3063.0 73 2761.5 74 2413.0 75 2276.0 76 2079.5 77 1811.0 78 1505.0 79 1271.0 80 1135.5 81 894.5 82 669.0 83 549.0 84 455.5 85 283.0 86 178.5 87 153.0 88 111.0 89 54.5 90 30.0 91 16.5 92 13.0 93 8.5 94 3.5 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 724870.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.78251087720556 #Duplication Level Percentage of deduplicated Percentage of total 1 63.47277366327118 34.771979136145596 2 22.54616296028164 24.702708352217563 3 8.0316153849577 13.1997617156393 4 2.665839338934986 5.841654903283533 5 0.9669863445455442 2.6486969969087757 6 0.4307655389425792 1.4159050693588293 7 0.26968110261312045 1.034166555609604 8 0.21657825868854727 0.9491760649897263 9 0.165180908070693 0.8144122403780487 >10 1.1817125450873691 12.086851013856474 >50 0.049677947194515695 1.757906658482038 >100 0.002773840128180638 0.24686255944371815 >500 0.0 0.0 >1k 2.521672839940636E-4 0.5299187336868273 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGGTCATTTATCTCGTATGCCGT 3836 0.5291983390125126 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.7591154275939135E-4 0.0 2 0.0 0.0 0.0 2.7591154275939135E-4 0.0 3 0.0 0.0 0.0 2.7591154275939135E-4 0.0 4 0.0 0.0 0.0 0.0013795577137969567 0.0 5 0.0 0.0 0.0 0.0013795577137969567 0.0 6 0.0 0.0 0.0 0.0013795577137969567 0.0 7 0.0 0.0 0.0 0.0013795577137969567 0.0 8 0.0 0.0 0.0 0.0015175134851766524 0.0 9 0.0 0.0 0.0 0.0017934250279360436 0.0 10 0.0 0.0 0.0 0.002069336570695435 0.0 11 1.3795577137969568E-4 0.0 0.0 0.002483203884834522 0.0 12 1.3795577137969568E-4 0.0 0.0 0.0031729827417330005 0.0 13 1.3795577137969568E-4 0.0 0.0 0.0034488942844923915 0.0 14 1.3795577137969568E-4 0.0 0.0 0.0035868500558720873 0.0 15 1.3795577137969568E-4 0.0 0.0 0.004276628912770566 0.0 16 1.3795577137969568E-4 0.0 0.0 0.004276628912770566 0.0 17 1.3795577137969568E-4 0.0 0.0 0.004690496226909653 0.0 18 1.3795577137969568E-4 0.0 0.0 0.004966407769669044 0.0 19 1.3795577137969568E-4 0.0 0.0 0.005380275083808131 0.0 20 1.3795577137969568E-4 0.0 0.0 0.005932098169326914 0.0 21 1.3795577137969568E-4 0.0 0.0 0.0060700539407066096 0.0 22 1.3795577137969568E-4 0.0 0.0 0.006897788568984783 0.0 23 1.3795577137969568E-4 0.0 0.0 0.007587567425883262 0.0 24 1.3795577137969568E-4 0.0 0.0 0.007863478968642652 0.0 25 1.3795577137969568E-4 0.0 0.0 0.008691213596920827 0.0 26 1.3795577137969568E-4 0.0 0.0 0.009794859767958393 0.0 27 1.3795577137969568E-4 0.0 0.0 0.014485355994868046 0.0 28 1.3795577137969568E-4 0.0 0.0 0.022072923420751307 0.0 29 1.3795577137969568E-4 0.0 0.0 0.035178721701822395 0.0 30 1.3795577137969568E-4 0.0 0.0 0.049526121925310744 0.0 31 1.3795577137969568E-4 0.0 0.0 0.06483921254845697 0.0 32 1.3795577137969568E-4 0.0 0.0 0.08056617048574227 0.0 33 1.3795577137969568E-4 0.0 0.0 0.09946611116476058 0.0 34 1.3795577137969568E-4 0.0 0.0 0.1335411866955454 0.0 35 1.3795577137969568E-4 0.0 0.0 0.17258266999599928 0.0 36 1.3795577137969568E-4 0.0 0.0 0.23962917488653138 0.0 37 1.3795577137969568E-4 0.0 0.0 0.3695835115262047 0.0 38 1.3795577137969568E-4 0.0 0.0 0.5529267316898202 0.0 39 1.3795577137969568E-4 0.0 0.0 0.786485852635645 0.0 40 1.3795577137969568E-4 0.0 0.0 1.0550857395119124 0.0 41 1.3795577137969568E-4 0.0 0.0 1.3287899899292286 0.0 42 1.3795577137969568E-4 0.0 0.0 1.6139445693710597 0.0 43 1.3795577137969568E-4 0.0 0.0 1.9044794238966987 0.0 44 1.3795577137969568E-4 0.0 0.0 2.2078441651606493 0.0 45 1.3795577137969568E-4 0.0 0.0 2.5741167381737413 0.0 46 1.3795577137969568E-4 0.0 0.0 2.9861906272848926 0.0 47 1.3795577137969568E-4 0.0 0.0 3.4295804764992344 0.0 48 1.3795577137969568E-4 0.0 0.0 3.9249796515237216 0.0 49 1.3795577137969568E-4 0.0 0.0 4.44272766151172 0.0 50 1.3795577137969568E-4 0.0 0.0 4.96820119469698 0.0 51 1.3795577137969568E-4 0.0 0.0 5.44428656172831 0.0 52 1.3795577137969568E-4 0.0 0.0 5.891125305227145 0.0 53 1.3795577137969568E-4 0.0 0.0 6.31451156759143 0.0 54 1.3795577137969568E-4 0.0 0.0 6.748382468580573 0.0 55 1.3795577137969568E-4 0.0 0.0 7.188875246595941 0.0 56 1.3795577137969568E-4 0.0 0.0 7.6532343730599965 0.0 57 1.3795577137969568E-4 0.0 0.0 8.104349745471602 0.0 58 1.3795577137969568E-4 0.0 0.0 8.557258542911143 0.0 59 1.3795577137969568E-4 0.0 0.0 9.06203871038945 0.0 60 1.3795577137969568E-4 0.0 0.0 9.575923958778816 0.0 61 1.3795577137969568E-4 0.0 0.0 10.085670534026791 0.0 62 1.3795577137969568E-4 0.0 0.0 10.55334059900396 0.0 63 1.3795577137969568E-4 0.0 0.0 10.985969898050685 0.0 64 1.3795577137969568E-4 0.0 0.0 11.425496985666395 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCCG 20 0.0069510066 52.5 34 ACGTAGC 20 0.0069510066 52.5 7 TATGCCG 560 0.0 49.375 43 TCGTATG 565 0.0 48.938053 40 CTCGTAT 540 0.0 48.61111 39 TCTCGTA 480 0.0 47.395836 38 CGTATGC 585 0.0 47.264957 41 CCGTCTT 595 0.0 47.058823 47 CGTCTTC 615 0.0 46.097565 48 GCCGTCT 620 0.0 45.725807 46 ATGCCGT 645 0.0 43.953487 44 GTATGCC 635 0.0 43.543304 42 ATCTCGT 525 0.0 43.333332 37 TATCTCG 525 0.0 43.333332 36 TGCCGTC 685 0.0 41.386864 45 CGGTCAT 805 0.0 34.782604 28 GTCTTCT 855 0.0 32.748535 49 GCGAAGT 45 0.004307423 31.111109 32 TCGTGAG 45 0.004307423 31.111109 26 GGTCATT 905 0.0 30.165745 29 >>END_MODULE