SRR1781151_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781151_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	93690
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGCGGA	15	0.0022185112	70.0	45
TACCGCT	15	0.0022185112	70.0	59
TACCACG	20	0.006932214	52.5	40
ACCGCTA	20	0.006932214	52.5	60
TTAGAGT	20	0.006932214	52.5	4
CAACCTA	20	0.006932214	52.5	68
GAGACGC	20	0.006932214	52.5	65
TAGATGC	20	0.006932214	52.5	4
TGTAACG	20	0.006932214	52.5	36
CTTGAGT	35	0.0012498726	40.0	12
GTATAGA	40	0.002408142	35.0	1
ACGTACA	40	0.002408142	35.0	43
CTGGGCG	40	0.002408142	35.0	28
TCTACAC	55	2.972655E-4	31.81818	3
GCCGAGA	45	0.004288478	31.111109	48
GGTATTG	45	0.004288478	31.111109	1
CGTACAT	45	0.004288478	31.111109	44
GCCAACA	45	0.004288478	31.111109	43
CTTCTAG	60	4.9498305E-4	29.166666	1
GTCTATT	50	0.0071771285	27.999998	2