##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781151_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 93690 Sequences flagged as poor quality 0 Sequence length 76 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193670615860817 34.0 32.0 34.0 21.0 34.0 2 31.277959227238767 34.0 33.0 34.0 23.0 34.0 3 31.202412210481373 34.0 33.0 34.0 23.0 34.0 4 31.332415412530686 34.0 33.0 34.0 23.0 34.0 5 31.354669655246024 34.0 33.0 34.0 23.0 34.0 6 34.06167146974063 37.0 34.0 38.0 24.0 38.0 7 34.052961895613194 37.0 34.0 38.0 24.0 38.0 8 33.844391076955915 37.0 34.0 38.0 23.0 38.0 9 34.12664105027218 37.0 34.0 38.0 24.0 38.0 10-11 33.93471555128616 37.0 34.0 38.0 23.0 38.0 12-13 33.90786103105988 37.0 34.0 38.0 23.0 38.0 14-15 33.785494716618636 37.0 34.0 38.0 22.5 38.0 16-17 33.73594834027111 37.0 34.0 38.0 22.5 38.0 18-19 33.761890276443594 37.0 34.0 38.0 22.5 38.0 20-21 33.6897427687053 37.0 34.0 38.0 22.5 38.0 22-23 33.75794108229267 37.0 34.0 38.0 22.5 38.0 24-25 33.73043547870637 37.0 34.0 38.0 22.5 38.0 26-27 33.644401750453625 37.0 34.0 38.0 22.0 38.0 28-29 33.75102999252855 37.0 34.0 38.0 22.5 38.0 30-31 33.79894866047604 37.0 34.0 38.0 23.0 38.0 32-33 33.75446152204077 37.0 34.0 38.0 22.5 38.0 34-35 33.7464083680222 37.0 34.0 38.0 22.5 38.0 36-37 33.625130750346884 37.0 34.0 38.0 22.0 38.0 38-39 33.649583733589495 37.0 34.0 38.0 22.0 38.0 40-41 33.63619383071833 37.0 34.0 38.0 22.0 38.0 42-43 33.70769559184545 37.0 34.0 38.0 22.0 38.0 44-45 33.73317323086775 37.0 34.0 38.0 22.5 38.0 46-47 33.7212562706799 37.0 34.0 38.0 22.5 38.0 48-49 33.69614686732842 37.0 34.0 38.0 22.5 38.0 50-51 33.56326182089871 37.0 34.0 38.0 22.0 38.0 52-53 33.63453943857402 37.0 34.0 38.0 22.0 38.0 54-55 33.62768171629843 37.0 34.0 38.0 22.0 38.0 56-57 33.58892624613085 37.0 34.0 38.0 22.0 38.0 58-59 33.53365353826449 37.0 34.0 38.0 22.0 38.0 60-61 33.56571138862205 37.0 34.0 38.0 22.0 38.0 62-63 33.520546483082505 37.0 34.0 38.0 22.0 38.0 64-65 33.53012594727292 37.0 34.0 38.0 22.0 38.0 66-67 33.41333653538264 37.0 34.0 38.0 21.0 38.0 68-69 33.153687693457144 37.0 33.5 38.0 21.0 38.0 70-71 33.30987298537731 37.0 34.0 38.0 21.0 38.0 72-73 33.309931689614686 37.0 33.5 38.0 21.0 38.0 74-75 33.32652364179742 37.0 33.0 38.0 21.0 38.0 76 32.05267371117515 36.0 31.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 5.0 13 15.0 14 88.0 15 229.0 16 467.0 17 867.0 18 1057.0 19 1038.0 20 931.0 21 906.0 22 903.0 23 921.0 24 1111.0 25 1283.0 26 1452.0 27 1872.0 28 2155.0 29 2554.0 30 3119.0 31 3679.0 32 4451.0 33 5544.0 34 7184.0 35 9398.0 36 14203.0 37 28258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.63688760806916 17.428754402817802 9.021240260433345 25.91311772867969 2 23.816842779378803 19.89646707225958 30.535809584800937 25.75088056356068 3 20.612658768278365 21.035329277404205 28.808837656099907 29.54317429821753 4 14.955704984523429 16.0540078983883 35.04963176432917 33.940655352759094 5 15.045362365247092 31.70135553420856 35.32821005443484 17.92507204610951 6 30.559291279752376 35.279111964990925 18.221795282314016 15.939801472942683 7 29.607215284448714 28.257017824741165 21.622371651190093 20.513395239620024 8 26.28882484790266 33.01206105240687 19.711815561959654 20.987298537730815 9 24.985590778097983 15.979293414451917 20.38424591738713 38.65086989006297 10-11 26.033194577863167 23.84192549898602 26.52470914718753 23.600170775963285 12-13 25.976625040025613 21.844380403458214 25.973956665599317 26.205037890916856 14-15 24.133311986337922 22.899455651617036 23.380830398121464 29.586401963923574 16-17 24.332906393425123 26.088696765930198 24.279005230013876 25.299391610630806 18-19 23.841391824100757 25.571565802113355 25.372505069911412 25.21453730387448 20-21 24.113566015583306 25.32447433023802 25.49151456932437 25.07044508485431 22-23 24.322766570605186 24.883658875013342 25.797843953463552 24.99573060091792 24-25 24.26032660902978 25.26150069377735 25.391717365780764 25.086455331412104 26-27 23.626320845341017 25.392784715551286 25.85868289038318 25.122211548724515 28-29 23.99082079197353 25.303661009712886 26.198100117408472 24.507418080905115 30-31 24.03725050699114 25.024549044721955 25.738606041199702 25.1995944070872 32-33 23.694097555769027 25.400789838830185 25.84267264382538 25.062439961575407 34-35 24.143451809157863 24.718753335468033 26.092432490127017 25.045362365247094 36-37 24.14665385846942 24.78653004589604 25.826662397267587 25.240153698366957 38-39 23.50997972035436 24.749172803927845 26.7061586081759 25.03468886754189 40-41 23.88355214003629 24.486071085494718 26.76112712135767 24.869249653111325 42-43 23.18657273988686 24.5741274415626 26.435051766463868 25.80424805208667 44-45 22.98857935745544 24.67552566976198 27.02636353933184 25.309531433450744 46-47 23.056356067883446 24.74490340484577 27.221688547336964 24.977051979933822 48-49 22.60646813960935 24.73636460668161 27.222755897107483 25.43441135660156 50-51 22.51147401003309 24.73156153271427 27.260113139075674 25.496851318176965 52-53 22.325755149962642 24.724090084320633 27.715337816202368 25.234816949514354 54-55 22.138435265236417 25.154232041840114 27.357775643078234 25.349557049845235 56-57 21.930835734870318 25.337816202369517 27.1346995410396 25.596648521720567 58-59 22.364179741701356 24.713950261500695 26.951649055395453 25.9702209414025 60-61 21.997545095527805 24.61201835841605 27.248905966485214 26.141530579570926 62-63 21.538584694204292 24.61628775749813 27.42715337816202 26.417974170135555 64-65 22.172056783007793 24.708613512648096 26.864126374212834 26.255203330131284 66-67 22.346568470487778 24.763582025829862 26.238659408688225 26.65119009499413 68-69 22.139502615006936 24.813213790159036 26.121784608816306 26.925498986017722 70-71 22.546162877574982 24.90073647134166 26.47881310705518 26.07428754402818 72-73 22.40900843206319 24.655779699007365 26.238659408688225 26.696552460241218 74-75 21.91269078877148 25.04216031593553 26.445725264169067 26.59942363112392 76 22.39193083573487 24.703810438680758 26.238659408688225 26.66559931689615 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 0.5 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 1.5 14 3.0 15 10.0 16 22.0 17 28.0 18 38.5 19 63.5 20 93.0 21 108.0 22 112.5 23 166.0 24 270.5 25 326.0 26 379.0 27 490.0 28 646.5 29 745.0 30 910.0 31 1124.5 32 1428.5 33 1683.0 34 1822.5 35 2164.0 36 2519.5 37 2673.0 38 3087.5 39 3695.0 40 4155.5 41 4692.5 42 4962.0 43 4985.0 44 5016.5 45 4990.0 46 4955.0 47 4935.0 48 4795.5 49 4346.0 50 4016.0 51 3764.0 52 3218.0 53 2838.5 54 2753.0 55 2590.0 56 2262.0 57 1957.5 58 1818.0 59 1728.0 60 1532.5 61 1401.5 62 1376.0 63 1308.5 64 1237.0 65 1210.0 66 1182.0 67 1177.0 68 1160.5 69 1151.0 70 1162.0 71 1166.0 72 1126.5 73 1081.5 74 1024.5 75 973.0 76 897.5 77 765.0 78 643.0 79 578.0 80 494.0 81 350.0 82 242.5 83 195.0 84 154.5 85 102.5 86 63.5 87 36.0 88 29.5 89 19.0 90 11.0 91 6.5 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.5 98 0.5 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 93690.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.43046216245064 #Duplication Level Percentage of deduplicated Percentage of total 1 73.88941239819614 46.86839577329491 2 14.73379551726459 18.691429181342727 3 5.46207175068991 10.393852065321806 4 2.2834354176482465 5.793574554381471 5 1.108904893316282 3.516917493862739 6 0.649525476206502 2.471982068523855 7 0.4644275425725247 2.062119756644252 8 0.32308002961566934 1.6394492475184117 9 0.2540889816248233 1.4505283381364074 >10 0.831257992865316 7.1117515209734234 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0010673497705197994 0.0 2 0.0 0.0 0.0 0.002134699541039599 0.0 3 0.0 0.0 0.0 0.002134699541039599 0.0 4 0.0 0.0 0.0 0.002134699541039599 0.0 5 0.0 0.0 0.0 0.002134699541039599 0.0 6 0.0 0.0 0.0 0.004269399082079198 0.0 7 0.0 0.0 0.0 0.004269399082079198 0.0 8 0.0 0.0 0.0 0.004269399082079198 0.0 9 0.0 0.0 0.0 0.005336748852598996 0.0 10 0.0 0.0 0.0 0.005336748852598996 0.0 11 0.0 0.0 0.0 0.006404098623118796 0.0 12 0.0 0.0 0.0 0.007471448393638595 0.0 13 0.0 0.0 0.0 0.007471448393638595 0.0 14 0.0 0.0 0.0 0.007471448393638595 0.0 15 0.0 0.0 0.0 0.007471448393638595 0.0 16 0.0 0.0 0.0 0.007471448393638595 0.0 17 0.0 0.0 0.0 0.007471448393638595 0.0 18 0.0 0.0 0.0 0.008538798164158395 0.0 19 0.0 0.0 0.0 0.011740847475717792 0.0 20 0.0 0.0 0.0 0.011740847475717792 0.0 21 0.0 0.0 0.0 0.011740847475717792 0.0 22 0.0 0.0 0.0 0.01814494609883659 0.0 23 0.0 0.0 0.0 0.02027964563987619 0.0 24 0.0 0.0 0.0 0.02027964563987619 0.0 25 0.0 0.0 0.0 0.022414345180915785 0.0 26 0.0 0.0 0.0 0.023481694951435584 0.0 27 0.0 0.0 0.0 0.039491941509232575 0.0 28 0.0 0.0 0.0 0.060838936919628564 0.0 29 0.0 0.0 0.0 0.08859003095314334 0.0 30 0.0 0.0 0.0 0.11527377521613832 0.0 31 0.0 0.0 0.0 0.14195751947913332 0.0 32 0.0 0.0 0.0 0.1750453623652471 0.0 33 0.0 0.0 0.0 0.23161490020279646 0.0 34 0.0 0.0 0.0 0.3170028818443804 0.0 35 0.0 0.0 0.0 0.4450848543067563 0.0 36 0.0 0.0 0.0 0.6404098623118796 0.0 37 0.0 0.0 0.0 0.9179208026470275 0.0 38 0.0 0.0 0.0 1.1890276443590564 0.0 39 0.0 0.0 0.0 1.5348489700074714 0.0 40 0.0 0.0 0.0 1.8603906500160103 0.0 41 0.0 0.0 0.0 2.186999679795069 0.0 42 0.0 0.0 0.0 2.584053794428434 0.0 43 0.0 0.0 0.0 3.016330451488953 0.0 44 0.0 0.0 0.0 3.5542747358309317 0.0 45 0.0 0.0 0.0 4.171202903191376 0.0 46 0.0 0.0 0.0 4.725157434091152 0.0 47 0.0 0.0 0.0 5.290852812466645 0.0 48 0.0 0.0 0.0 5.859750240153699 0.0 49 0.0 0.0 0.0 6.371010780232682 0.0 50 0.0 0.0 0.0 6.843846728572953 0.0 51 0.0 0.0 0.0 7.3209520759953035 0.0 52 0.0 0.0 0.0 7.800192122958694 0.0 53 0.0 0.0 0.0 8.308250613726118 0.0 54 0.0 0.0 0.0 8.83445405059238 0.0 55 0.0 0.0 0.0 9.355320738606041 0.0 56 0.0 0.0 0.0 9.923150816522574 0.0 57 0.0 0.0 0.0 10.457893051552993 0.0 58 0.0 0.0 0.0 10.979827089337176 0.0 59 0.0 0.0 0.0 11.501761127121357 0.0 60 0.0 0.0 0.0 11.986337922937347 0.0 61 0.0 0.0 0.0 12.403671683210588 0.0 62 0.0 0.0 0.0 12.848756537517344 0.0 63 0.0 0.0 0.0 13.323727185398655 0.0 64 0.0 0.0 0.0 13.825381577542961 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCGGA 15 0.0022185112 70.0 45 TACCGCT 15 0.0022185112 70.0 59 TACCACG 20 0.006932214 52.5 40 ACCGCTA 20 0.006932214 52.5 60 TTAGAGT 20 0.006932214 52.5 4 CAACCTA 20 0.006932214 52.5 68 GAGACGC 20 0.006932214 52.5 65 TAGATGC 20 0.006932214 52.5 4 TGTAACG 20 0.006932214 52.5 36 CTTGAGT 35 0.0012498726 40.0 12 GTATAGA 40 0.002408142 35.0 1 ACGTACA 40 0.002408142 35.0 43 CTGGGCG 40 0.002408142 35.0 28 TCTACAC 55 2.972655E-4 31.81818 3 GCCGAGA 45 0.004288478 31.111109 48 GGTATTG 45 0.004288478 31.111109 1 CGTACAT 45 0.004288478 31.111109 44 GCCAACA 45 0.004288478 31.111109 43 CTTCTAG 60 4.9498305E-4 29.166666 1 GTCTATT 50 0.0071771285 27.999998 2 >>END_MODULE