##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781150_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 161295 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.181040949812456 34.0 32.0 34.0 21.0 34.0 2 31.397327877491552 34.0 33.0 34.0 23.0 34.0 3 31.45559998760036 34.0 33.0 34.0 23.0 34.0 4 31.48709507424285 34.0 33.0 34.0 23.0 34.0 5 31.565975386713784 34.0 33.0 34.0 23.0 34.0 6 34.477305558138816 37.0 34.0 38.0 26.0 38.0 7 34.421829566942556 37.0 34.0 38.0 25.0 38.0 8 34.19707988468335 37.0 34.0 38.0 24.0 38.0 9 34.4825258067516 37.0 34.0 38.0 26.0 38.0 10-11 34.335537369416286 37.0 34.0 38.0 24.5 38.0 12-13 34.32097709166434 37.0 34.0 38.0 24.5 38.0 14-15 34.20902073839859 37.0 34.0 38.0 24.0 38.0 16-17 34.16578319228742 37.0 34.0 38.0 24.0 38.0 18-19 34.23002572925385 37.0 34.0 38.0 24.0 38.0 20-21 34.15333705322546 37.0 34.0 38.0 24.0 38.0 22-23 34.22917945379584 37.0 34.0 38.0 24.5 38.0 24-25 34.2217644688304 37.0 34.0 38.0 24.0 38.0 26-27 34.13450819926222 37.0 34.0 38.0 24.0 38.0 28-29 34.22131188195542 37.0 34.0 38.0 24.0 38.0 30-31 34.28290089587402 37.0 34.0 38.0 24.0 38.0 32-33 34.24399082426609 37.0 34.0 38.0 24.0 38.0 34-35 34.28125794351964 37.0 34.0 38.0 24.0 38.0 36-37 34.12598654639015 37.0 34.0 38.0 24.0 38.0 38-39 34.132372361201526 37.0 34.0 38.0 24.0 38.0 40-41 34.12776899469915 37.0 34.0 38.0 24.0 38.0 42-43 34.19087696456803 37.0 34.0 38.0 24.0 38.0 44-45 34.19859884063362 37.0 34.0 38.0 24.0 38.0 46-47 34.195666325676555 37.0 34.0 38.0 24.0 38.0 48-49 34.164419231842274 37.0 34.0 38.0 24.0 38.0 50-51 34.00907343687033 37.0 34.0 38.0 24.0 38.0 52-53 34.09372268204223 37.0 34.0 38.0 24.0 38.0 54-55 34.062835177779846 37.0 34.0 38.0 24.0 38.0 56-57 34.04701323661614 37.0 34.0 38.0 24.0 38.0 58-59 34.04998295049444 37.0 34.0 38.0 24.0 38.0 60-61 34.001171766018786 37.0 34.0 38.0 24.0 38.0 62-63 33.95958337208221 37.0 34.0 38.0 23.5 38.0 64-65 33.99566012585635 37.0 34.0 38.0 24.0 38.0 66-67 33.90328590470877 37.0 34.0 38.0 23.0 38.0 68-69 33.67626398834434 37.0 34.0 38.0 22.5 38.0 70-71 33.8596918689358 37.0 34.0 38.0 23.5 38.0 72-73 33.838885272327104 37.0 34.0 38.0 23.0 38.0 74-75 33.87635078582721 37.0 34.0 38.0 23.5 38.0 76 32.520183514678074 37.0 31.0 38.0 21.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 19.0 14 66.0 15 191.0 16 389.0 17 640.0 18 923.0 19 1053.0 20 1142.0 21 1201.0 22 1391.0 23 1602.0 24 1878.0 25 2102.0 26 2592.0 27 3223.0 28 3777.0 29 4484.0 30 5369.0 31 6606.0 32 7901.0 33 9786.0 34 12524.0 35 16699.0 36 25185.0 37 50549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.5879909482625 17.156762453888838 8.852103289004619 25.403143308844044 2 24.393812579435195 20.61936203850088 30.15344555007905 24.83337983198487 3 20.043398741436498 21.704950556433865 29.64754022133358 28.60411048079606 4 14.049412567035555 16.87219070646951 36.947828512973125 32.13056821352181 5 13.73756161071329 33.020862394990544 36.42146377755045 16.820112216745713 6 28.42679562292694 37.867881831426885 19.25912148547692 14.446201060169257 7 29.295390433677422 29.52416379924982 22.200936172850987 18.979509594221767 8 26.322576645277284 34.08227161412319 19.703028612170247 19.892123128429276 9 25.1005920828296 16.823212126848322 21.251743699432716 36.824452090889366 10-11 25.334325304566168 24.2896555999876 27.723116029635143 22.652903065811092 12-13 25.66229579342199 22.786819182243715 26.444403112309743 25.106481912024552 14-15 23.83427880591463 23.868997799063827 23.95734523698813 28.33937815803342 16-17 23.942465668495615 26.83189187513562 25.152670572553397 24.07297188381537 18-19 23.187637558510804 26.635667565640595 26.568399516414026 23.608295359434575 20-21 23.224836479742088 26.74385442822158 26.50578133234136 23.52552775969497 22-23 23.45174989925292 26.265228308379058 26.705415542949257 23.577606249418768 24-25 23.19445736073654 26.639697448773987 26.57986918379367 23.585976006695805 26-27 22.39685049133575 26.69921572274404 26.940698719737128 23.96323506618308 28-29 23.27071514926067 26.344586007005798 27.503332403360304 22.88136644037323 30-31 23.440590222883536 26.22647943209647 27.1744319414737 23.158498403546297 32-33 22.690101987042375 26.92333922316253 26.855761182925697 23.5307976068694 34-35 23.6104652965064 25.832480858055117 27.232710251402708 23.324343594035774 36-37 23.76143091850336 25.96081713630305 26.558789795095944 23.718962150097646 38-39 23.0614712173347 26.5938187792554 27.186831581884125 23.157878421525776 40-41 23.09836014755572 25.917418394866548 27.68684708143464 23.297374376143093 42-43 23.06240119036548 26.29653740041539 27.03865587897951 23.602405530239622 44-45 22.58966489971791 26.127282308813044 27.25967946929539 24.023373322173658 46-47 22.774109550823027 25.585418022877338 27.460553643944323 24.179918782355312 48-49 22.434669394587555 25.590997861062032 28.08487553860938 23.88945720574103 50-51 22.54688614030193 25.537679407297187 27.66018785455222 24.25524659784866 52-53 22.13552806968598 25.281626832821846 28.317988778325425 24.264856319166743 54-55 21.610403298304348 26.084813540407325 27.990328280479865 24.314454880808455 56-57 21.474317244799902 25.877429554542918 28.064726122942435 24.583527077714745 58-59 21.729439846244457 25.57270839145665 27.837192721411082 24.860659040887814 60-61 21.519885923308223 25.454291825537062 28.024737282618805 25.001084968535913 62-63 20.889984190458478 25.164760221953564 28.657428934560897 25.28782665302706 64-65 21.5973836758734 25.291236554139928 28.183762670882544 24.927617099104125 66-67 21.665891689141013 25.29836634737593 27.409405127251308 25.62633683623175 68-69 21.413868997799064 25.164760221953564 27.51945193589386 25.901918844353517 70-71 21.944883598375647 25.20908893642084 27.472333302334235 25.373694162869278 72-73 22.048420595802725 24.66474472240305 27.29873833658824 25.988096345205992 74-75 21.794227967388945 25.192659412877028 27.112433739421554 25.900678880312473 76 22.099879103505998 25.11857156142472 26.731144796800894 26.05040453826839 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.5 11 0.5 12 0.0 13 0.5 14 3.5 15 12.5 16 19.0 17 19.0 18 35.0 19 57.5 20 102.0 21 140.0 22 160.5 23 227.0 24 323.5 25 374.0 26 474.5 27 677.5 28 965.0 29 1150.0 30 1322.5 31 1665.0 32 2245.0 33 2655.0 34 2954.5 35 3705.0 36 4739.5 37 5323.0 38 5729.5 39 6789.5 40 8275.5 41 9515.5 42 9923.0 43 10286.5 44 10586.5 45 10620.5 46 10718.0 47 10410.0 48 9594.5 49 8562.0 50 8037.0 51 7542.5 52 6240.5 53 5039.5 54 4646.0 55 4388.0 56 3714.5 57 2877.5 58 2456.0 59 2196.5 60 1808.5 61 1588.5 62 1497.0 63 1413.0 64 1276.5 65 1216.0 66 1192.5 67 1177.0 68 1155.0 69 1171.5 70 1200.5 71 1191.0 72 1143.0 73 1085.0 74 1013.5 75 952.0 76 896.5 77 751.5 78 615.5 79 569.0 80 521.0 81 410.5 82 280.0 83 212.0 84 175.5 85 113.0 86 76.0 87 65.0 88 54.0 89 31.0 90 19.5 91 13.0 92 6.0 93 5.5 94 3.5 95 1.5 96 1.0 97 1.5 98 1.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 161295.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.72568895502031 #Duplication Level Percentage of deduplicated Percentage of total 1 72.46449436554303 36.75811401469357 2 12.956806570681268 13.144858799094827 3 5.2311227358283015 7.960569143494839 4 2.4200053777897286 4.910257602529526 5 1.394558654574788 3.5369974270746147 6 1.0963357696350435 3.336743234446201 7 0.7296682881517514 2.590904863758951 8 0.5817790706201569 2.3608915341455097 9 0.482778850619668 2.204036082953594 >10 2.6167835928524283 22.367091354350723 >50 0.025666723703830455 0.8295359434576398 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0024799280820856197 0.0 2 0.0 0.0 0.0 0.0024799280820856197 0.0 3 0.0 0.0 0.0 0.0024799280820856197 0.0 4 0.0 0.0 0.0 0.0030999101026070244 0.0 5 0.0 0.0 0.0 0.0030999101026070244 0.0 6 0.0 0.0 0.0 0.0030999101026070244 0.0 7 0.0 0.0 0.0 0.0030999101026070244 0.0 8 0.0 0.0 0.0 0.0030999101026070244 0.0 9 0.0 0.0 0.0 0.004339874143649834 0.0 10 0.0 0.0 0.0 0.0049598561641712394 0.0 11 0.0 0.0 0.0 0.0049598561641712394 0.0 12 0.0 0.0 0.0 0.0049598561641712394 0.0 13 0.0 0.0 0.0 0.0049598561641712394 0.0 14 0.0 0.0 0.0 0.0049598561641712394 0.0 15 0.0 0.0 0.0 0.0049598561641712394 0.0 16 0.0 0.0 0.0 0.0049598561641712394 0.0 17 0.0 0.0 0.0 0.0049598561641712394 0.0 18 0.0 0.0 0.0 0.0049598561641712394 0.0 19 0.0 0.0 0.0 0.005579838184692644 0.0 20 0.0 0.0 0.0 0.006199820205214049 0.0 21 0.0 0.0 0.0 0.006819802225735454 0.0 22 0.0 0.0 0.0 0.008059766266778264 0.0 23 0.0 0.0 0.0 0.008059766266778264 0.0 24 0.0 0.0 0.0 0.010539694348863883 0.0 25 0.0 0.0 0.0 0.010539694348863883 0.0 26 0.0 0.0 0.0 0.011159676369385288 0.0 27 0.0 0.0 0.0 0.014879568492513717 0.0 28 0.0 0.0 0.0 0.024799280820856195 0.0 29 0.0 0.0 0.0 0.03347902910815587 0.0 30 0.0 0.0 0.0 0.039678849313369915 0.0 31 0.0 0.0 0.0 0.04835859760066958 0.0 32 0.0 0.0 0.0 0.06695805821631173 0.0 33 0.0 0.0 0.0 0.08617750085247528 0.0 34 0.0 0.0 0.0 0.127096314206888 0.0 35 0.0 0.0 0.0 0.1673951455407793 0.0 36 0.0 0.0 0.0 0.23683313183917667 0.0 37 0.0 0.0 0.0 0.3378902011841657 0.0 38 0.0 0.0 0.0 0.47862611984252457 0.0 39 0.0 0.0 0.0 0.6640007439784247 0.0 40 0.0 0.0 0.0 0.8884342354071731 0.0 41 0.0 0.0 0.0 1.1184475650206145 0.0 42 0.0 0.0 0.0 1.4141789888093246 0.0 43 0.0 0.0 0.0 1.7582690101987042 0.0 44 0.0 0.0 0.0 2.211475867199851 0.0 45 0.0 0.0 0.0 2.741560494745652 0.0 46 0.0 0.0 0.0 3.387581760128956 0.0 47 0.0 0.0 0.0 4.031743079450696 0.0 48 0.0 0.0 0.0 4.639325459561673 0.0 49 0.0 0.0 0.0 5.253727641898385 0.0 50 0.0 0.0 0.0 5.778232431259493 0.0 51 0.0 0.0 0.0 6.31513686103103 0.0 52 0.0 0.0 0.0 6.865060913233516 0.0 53 0.0 0.0 0.0 7.426764623825909 0.0 54 0.0 0.0 0.0 8.007067795033944 0.0 55 0.0 0.0 0.0 8.665488700827677 0.0 56 0.0 0.0 0.0 9.351188815524349 0.0 57 0.0 0.0 0.0 10.00030999101026 0.0 58 0.0 0.0 0.0 10.668650609132335 0.0 59 0.0 0.0 0.0 11.321491676741374 0.0 60 0.0 0.0 0.0 11.987972348801884 0.0 61 0.0 0.0 0.0 12.570755448092005 0.0 62 0.0 0.0 0.0 13.13803899686909 0.0 63 0.0 0.0 0.0 13.719582132118168 0.0 64 0.0 0.0 0.0 14.329024458290709 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTCGCT 15 0.0022214276 70.0 45 GATCCAT 20 0.006941258 52.5 43 AGGACCG 20 0.006941258 52.5 5 ACTTAGA 20 0.006941258 52.5 27 ACGGGCT 20 0.006941258 52.5 40 CCCAACG 20 0.006941258 52.5 54 GGGAACG 20 0.006941258 52.5 68 GGAACGT 20 0.006941258 52.5 69 TAGATAA 20 0.006941258 52.5 16 GTCTTTC 20 0.006941258 52.5 8 CTCTCGC 20 0.006941258 52.5 44 CCTCTCG 30 5.8642955E-4 46.666664 43 GTTAAGC 35 0.0012525615 40.0 21 GTTCTAC 45 9.166753E-5 38.888885 35 CGTCCAA 45 9.166753E-5 38.888885 40 CGAACGA 40 0.0024132915 35.0 14 TGGTTCG 40 0.0024132915 35.0 35 CTTGCGG 40 0.0024132915 35.0 34 GTACGAA 40 0.0024132915 35.0 1 TCTTGGA 55 2.9821353E-4 31.818184 48 >>END_MODULE