##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781149_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 117743 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.83519190100473 34.0 32.0 34.0 21.0 34.0 2 30.99234774041769 34.0 32.0 34.0 21.0 34.0 3 31.001647656336257 34.0 32.0 34.0 23.0 34.0 4 31.126546801083716 34.0 33.0 34.0 23.0 34.0 5 31.101704559931378 34.0 32.0 34.0 23.0 34.0 6 33.775825314456064 37.0 34.0 38.0 23.0 38.0 7 33.78802136857393 37.0 34.0 38.0 22.0 38.0 8 33.518196410826974 37.0 34.0 38.0 21.0 38.0 9 33.86986912173123 37.0 34.0 38.0 23.0 38.0 10-11 33.67713154922161 37.0 34.0 38.0 22.0 38.0 12-13 33.64837824753913 37.0 34.0 38.0 22.0 38.0 14-15 33.50585172791588 37.0 34.0 38.0 21.0 38.0 16-17 33.44765293902822 37.0 34.0 38.0 21.0 38.0 18-19 33.50205107734642 37.0 34.0 38.0 21.5 38.0 20-21 33.42062797788404 37.0 34.0 38.0 21.0 38.0 22-23 33.474053659240894 37.0 34.0 38.0 21.0 38.0 24-25 33.48706080191604 37.0 34.0 38.0 21.0 38.0 26-27 33.39956515461641 37.0 34.0 38.0 21.0 38.0 28-29 33.47632555650867 37.0 34.0 38.0 21.0 38.0 30-31 33.54655053803623 37.0 34.0 38.0 21.5 38.0 32-33 33.49870480623052 37.0 34.0 38.0 21.5 38.0 34-35 33.48744723677841 37.0 34.0 38.0 21.0 38.0 36-37 33.3478635672609 37.0 34.0 38.0 21.0 38.0 38-39 33.37596714879016 37.0 34.0 38.0 21.0 38.0 40-41 33.368782008272255 37.0 34.0 38.0 21.0 38.0 42-43 33.43149486593683 37.0 34.0 38.0 21.0 38.0 44-45 33.47962086918118 37.0 34.0 38.0 21.5 38.0 46-47 33.46841850470941 37.0 34.0 38.0 21.5 38.0 48-49 33.44214093406827 37.0 34.0 38.0 21.0 38.0 50-51 33.303134793575836 37.0 34.0 38.0 21.0 38.0 52-53 33.37542783859762 37.0 34.0 38.0 21.0 38.0 54-55 33.3416041717979 37.0 34.0 38.0 21.0 38.0 56-57 33.31559413298455 37.0 34.0 38.0 21.0 38.0 58-59 33.314834002870654 37.0 34.0 38.0 21.0 38.0 60-61 33.259752172103646 37.0 34.0 38.0 21.0 38.0 62-63 33.25432934441963 37.0 34.0 38.0 21.0 38.0 64-65 33.2532464774976 37.0 34.0 38.0 21.0 38.0 66-67 33.131859218807065 37.0 33.5 38.0 21.0 38.0 68-69 32.9241695896996 37.0 32.5 38.0 20.0 38.0 70-71 33.07404261824482 37.0 33.0 38.0 21.0 38.0 72-73 33.06079342296357 37.0 33.0 38.0 21.0 38.0 74-75 33.05524319917107 37.0 32.0 38.0 21.0 38.0 76 31.685255174405274 36.0 28.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 23.0 14 99.0 15 277.0 16 592.0 17 1091.0 18 1435.0 19 1504.0 20 1441.0 21 1376.0 22 1312.0 23 1461.0 24 1618.0 25 1866.0 26 2158.0 27 2497.0 28 2896.0 29 3403.0 30 3997.0 31 4822.0 32 5616.0 33 6651.0 34 8579.0 35 11131.0 36 16701.0 37 35189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.91100957169429 18.6533382026957 9.26254639341617 26.173105832193844 2 22.660370467883443 19.006650076862318 32.537815411531895 25.795164043722345 3 20.542197837663387 21.132466473590785 28.29382638458337 30.03150930416246 4 14.72614083215138 15.660378960957338 34.7477132398529 34.86576696703838 5 15.204300892622067 31.935656472146963 34.656837349141774 18.203205286089194 6 32.48261043119336 34.64664566046389 16.926696279184323 15.944047629158423 7 29.79455254240167 27.361286870557063 21.447559515215342 21.396601071825927 8 26.43808973781881 33.06523530061235 19.23086722777575 21.26580773379309 9 24.667283830036606 14.321870514595346 20.988084217320775 40.02276143804727 10-11 27.036426793949538 22.920683182864373 26.11917481294005 23.923715210246044 12-13 26.30644709239615 21.10274071494696 25.773082051586933 26.817730141069955 14-15 24.612928157087897 22.437002624359835 22.60813806340929 30.34193115514298 16-17 24.974308451457837 25.08514306582982 23.995057030991227 25.94549145172112 18-19 24.187849808481186 24.70889989213796 25.19045718216794 25.912793117212914 20-21 24.6095309275286 24.778543098103498 25.01295193769481 25.598974036673095 22-23 24.8507342262385 24.171712968074534 25.15733419396482 25.82021861172214 24-25 24.54073702895289 24.350916827327314 24.949678537152952 26.158667606566844 26-27 24.146233746379828 24.570887441291628 25.339510629081985 25.943368183246562 28-29 24.66133867830784 24.23668498339604 25.620631375113597 25.481344963182522 30-31 24.752214569018964 24.433299644140202 25.130156357490467 25.684329429350367 32-33 24.52927137919027 24.80274835871347 25.061787112609668 25.606193149486593 34-35 25.146293197897112 23.864688346653303 25.401510068539107 25.587508386910475 36-37 24.810816778916795 24.053234587194144 25.134827548134496 26.00112108575457 38-39 24.250273901633218 24.150055629634036 26.055052105008365 25.544618363724382 40-41 24.404423192886203 24.13009690597318 26.117051544465486 25.34842835667513 42-43 24.059179738922907 23.885921031398894 25.865231903382792 26.189667326295407 44-45 23.385678978792797 24.23201379275201 26.32003601063333 26.062271217821863 46-47 23.6485396159432 24.228191909497802 26.39562436832763 25.727644106231367 48-49 23.26465267574293 24.043467552211172 26.66145758134241 26.030422190703483 50-51 23.3822817492335 24.51270988508871 26.121722735109522 25.983285630568272 52-53 23.276967632895374 24.291465310039662 26.52386978419099 25.90769727287397 54-55 22.8387250197464 24.47703897471612 26.42917201022566 26.255063995311822 56-57 22.95093105717986 24.40877338259337 26.464530649510586 26.175764910716182 58-59 22.997120847948498 24.200589419328537 26.520047900936788 26.28224183178618 60-61 22.77332835072998 24.353464749496787 26.4270487417511 26.446158158022133 62-63 22.55217954434465 24.10514470136102 26.74055672335818 26.602119030936155 64-65 22.972163832091216 24.14421300719791 26.273435675308406 26.610187485402463 66-67 22.934369492749006 24.398581650635922 25.655986580886257 27.011062275728815 68-69 22.67617894982695 24.576936959891288 25.826698091173533 26.920185999108227 70-71 23.112822951877835 24.788520663824293 25.702807834077902 26.395848550219974 72-73 23.28480915900868 24.49338383924173 25.616602401861698 26.605204599887887 74-75 23.145096906796216 24.630972804946406 25.60343802551341 26.620492262743966 76 22.8208895645601 24.70889989213796 25.31955190542113 27.15065863788081 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 3.5 15 9.5 16 22.0 17 32.0 18 43.0 19 60.5 20 80.5 21 94.0 22 147.0 23 234.5 24 348.5 25 428.0 26 490.5 27 612.5 28 752.5 29 833.0 30 984.0 31 1208.5 32 1566.0 33 1850.0 34 2044.5 35 2434.0 36 2985.0 37 3341.0 38 3579.5 39 4122.0 40 4733.0 41 5287.0 42 5534.0 43 5635.5 44 5769.5 45 5687.0 46 5572.0 47 5575.5 48 5380.5 49 4905.0 50 4628.0 51 4483.0 52 4048.0 53 3650.0 54 3542.0 55 3386.0 56 3150.5 57 2928.5 58 2786.0 59 2758.5 60 2693.5 61 2658.5 62 2661.0 63 2620.5 64 2544.5 65 2444.0 66 2272.0 67 2165.0 68 2070.0 69 1905.5 70 1711.0 71 1586.0 72 1508.5 73 1334.0 74 1125.0 75 1013.0 76 968.0 77 815.5 78 606.5 79 505.0 80 459.0 81 340.5 82 227.0 83 186.0 84 152.5 85 83.5 86 42.0 87 36.0 88 25.5 89 13.0 90 7.0 91 3.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 1.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 4.246536949117994E-4 58-59 0.0 60-61 0.0 62-63 4.246536949117994E-4 64-65 4.246536949117994E-4 66-67 4.246536949117994E-4 68-69 4.246536949117994E-4 70-71 8.493073898235988E-4 72-73 8.493073898235988E-4 74-75 8.493073898235988E-4 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 117743.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.17063434768946 #Duplication Level Percentage of deduplicated Percentage of total 1 73.91602468438673 46.693221677721816 2 14.583417362427568 18.424874514833153 3 5.670955511636349 10.74713571082782 4 2.307102811277377 5.829645923749183 5 1.0863281302518184 3.4312018548873393 6 0.6399655816830019 2.4256219053361985 7 0.42485110044501806 1.8786679462898006 8 0.266204170532005 1.3453029054805805 9 0.2312480673308326 1.314727839446931 >10 0.872558114521572 7.863737122376701 >50 0.001344465507737399 0.04586259905047434 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004246536949117995 0.0 2 0.0 0.0 0.0 0.004246536949117995 0.0 3 0.0 0.0 0.0 0.005095844338941593 0.0 4 0.0 0.0 0.0 0.005945151728765192 0.0 5 0.0 0.0 0.0 0.005945151728765192 0.0 6 0.0 0.0 0.0 0.005945151728765192 0.0 7 0.0 0.0 0.0 0.005945151728765192 0.0 8 0.0 0.0 0.0 0.005945151728765192 0.0 9 0.0 0.0 0.0 0.005945151728765192 0.0 10 0.0 0.0 0.0 0.006794459118588791 0.0 11 0.0 0.0 0.0 0.00764376650841239 0.0 12 0.0 0.0 0.0 0.00764376650841239 0.0 13 0.0 0.0 0.0 0.00764376650841239 0.0 14 0.0 0.0 0.0 0.00849307389823599 0.0 15 0.0 0.0 0.0 0.009342381288059587 0.0 16 0.0 0.0 0.0 0.009342381288059587 0.0 17 0.0 0.0 0.0 0.010191688677883186 0.0 18 0.0 0.0 0.0 0.010191688677883186 0.0 19 0.0 0.0 8.493073898235988E-4 0.012739610847353982 0.0 20 0.0 0.0 8.493073898235988E-4 0.01443822562700118 0.0 21 0.0 0.0 8.493073898235988E-4 0.01443822562700118 0.0 22 0.0 0.0 8.493073898235988E-4 0.020383377355766372 0.0 23 0.0 0.0 8.493073898235988E-4 0.020383377355766372 0.0 24 0.0 0.0 8.493073898235988E-4 0.02293129952523717 0.0 25 0.0 0.0 8.493073898235988E-4 0.024629914304884367 0.0 26 0.0 0.0 8.493073898235988E-4 0.024629914304884367 0.0 27 0.0 0.0 8.493073898235988E-4 0.03652021776241475 0.0 28 0.0 0.0 8.493073898235988E-4 0.05265705816906313 0.0 29 0.0 0.0 8.493073898235988E-4 0.0798348946434183 0.0 30 0.0 0.0 8.493073898235988E-4 0.09936896460936107 0.0 31 0.0 0.0 8.493073898235988E-4 0.12569749369389263 0.0 32 0.0 0.0 8.493073898235988E-4 0.1477794858293062 0.0 33 0.0 0.0 8.493073898235988E-4 0.19024485532048616 0.0 34 0.0 0.0 8.493073898235988E-4 0.2734769795231988 0.0 35 0.0 0.0 8.493073898235988E-4 0.3821883254206195 0.0 36 0.0 0.0 8.493073898235988E-4 0.5401594999278089 0.0 37 0.0 0.0 8.493073898235988E-4 0.7991982538240066 0.0 38 0.0 0.0 8.493073898235988E-4 1.0760724629064997 0.0 39 0.0 0.0 8.493073898235988E-4 1.3368098315823447 0.0 40 0.0 0.0 8.493073898235988E-4 1.622177114563074 0.0 41 0.0 0.0 8.493073898235988E-4 1.9440646153062178 0.0 42 0.0 0.0 8.493073898235988E-4 2.2897327229644224 0.0 43 0.0 0.0 8.493073898235988E-4 2.6583321301478646 0.0 44 0.0 0.0 8.493073898235988E-4 3.063451755093721 0.0 45 0.0 0.0 8.493073898235988E-4 3.4770644539378135 0.0 46 0.0 0.0 8.493073898235988E-4 3.918704296646085 0.0 47 0.0 0.0 8.493073898235988E-4 4.374782364981358 0.0 48 0.0 0.0 8.493073898235988E-4 4.837654892435219 0.0 49 0.0 0.0 8.493073898235988E-4 5.342143481990437 0.0 50 0.0 0.0 8.493073898235988E-4 5.771043713851355 0.0 51 0.0 0.0 8.493073898235988E-4 6.154930654051621 0.0 52 0.0 0.0 8.493073898235988E-4 6.577036426793949 0.0 53 0.0 0.0 8.493073898235988E-4 6.979608129570336 0.0 54 0.0 0.0 8.493073898235988E-4 7.4034125170923115 0.0 55 0.0 0.0 8.493073898235988E-4 7.906202491867882 0.0 56 0.0 0.0 8.493073898235988E-4 8.421732077490807 0.0 57 0.0 0.0 8.493073898235988E-4 8.843837850233134 0.0 58 0.0 0.0 8.493073898235988E-4 9.28632700033123 0.0 59 0.0 0.0 8.493073898235988E-4 9.669364633141672 0.0 60 0.0 0.0 8.493073898235988E-4 10.068539106358765 0.0 61 0.0 0.0 8.493073898235988E-4 10.470261501745327 0.0 62 0.0 0.0 8.493073898235988E-4 10.888120737538538 0.0 63 0.0 0.0 8.493073898235988E-4 11.290692440314924 0.0 64 0.0 0.0 8.493073898235988E-4 11.664387691837307 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGACTT 15 0.0022199322 70.00001 5 CATAGGG 20 0.0069366205 52.5 2 AGACAAT 20 0.0069366205 52.5 16 CCGAAAT 20 0.0069366205 52.5 47 ATACGGT 20 0.0069366205 52.5 6 TACCGGG 20 0.0069366205 52.5 53 GTAGCAG 30 5.857801E-4 46.666668 9 CATGTAC 30 5.857801E-4 46.666668 3 TAGAACC 35 0.0012511825 40.000004 4 GCATGTA 35 0.0012511825 40.000004 2 GGAATCT 40 0.0024106507 35.0 15 GGTGTTC 40 0.0024106507 35.0 3 AAATAGC 40 0.0024106507 35.0 53 GTACTGC 50 1.7011902E-4 35.0 6 TGAATGC 40 0.0024106507 35.0 3 GGTTCGA 40 0.0024106507 35.0 44 GCAGAAA 40 0.0024106507 35.0 48 GGTTACT 40 0.0024106507 35.0 67 AGGATTG 75 1.4768211E-6 32.666668 5 TGTACTG 55 2.9772733E-4 31.81818 5 >>END_MODULE