##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781149_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 106262 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.242137358604204 34.0 34.0 34.0 32.0 34.0 2 33.3037115808097 34.0 34.0 34.0 33.0 34.0 3 33.36893715533304 34.0 34.0 34.0 33.0 34.0 4 33.42781050610755 34.0 34.0 34.0 34.0 34.0 5 33.4216841392031 34.0 34.0 34.0 34.0 34.0 6 36.83607498447234 38.0 37.0 38.0 34.0 38.0 7 36.73355479851687 38.0 37.0 38.0 34.0 38.0 8 36.5363347198434 38.0 37.0 38.0 34.0 38.0 9 36.50629575953775 38.0 37.0 38.0 34.0 38.0 10-11 36.43405450678512 38.0 37.0 38.0 34.0 38.0 12-13 36.361093335340954 38.0 37.0 38.0 34.0 38.0 14-15 36.358731249176564 38.0 37.0 38.0 34.0 38.0 16-17 36.28323859893471 38.0 37.0 38.0 34.0 38.0 18-19 36.255001788033354 38.0 37.0 38.0 34.0 38.0 20-21 36.20562854077657 38.0 37.0 38.0 33.5 38.0 22-23 36.28052831680186 38.0 37.0 38.0 34.0 38.0 24-25 36.2682426455365 38.0 37.0 38.0 34.0 38.0 26-27 36.07671604148237 38.0 37.0 38.0 32.5 38.0 28-29 36.043053960964414 38.0 37.0 38.0 32.0 38.0 30-31 36.09983813592818 38.0 37.0 38.0 33.0 38.0 32-33 35.99648510285897 38.0 37.0 38.0 32.0 38.0 34-35 35.99046225367488 38.0 37.0 38.0 32.0 38.0 36-37 35.94058553386911 38.0 36.5 38.0 32.0 38.0 38-39 35.72189964427547 38.0 36.0 38.0 31.0 38.0 40-41 35.90352618998325 38.0 36.5 38.0 31.5 38.0 42-43 35.979169411454706 38.0 37.0 38.0 32.0 38.0 44-45 35.95197248310779 38.0 36.5 38.0 32.0 38.0 46-47 35.957943573431706 38.0 37.0 38.0 32.0 38.0 48-49 35.93657657488096 38.0 36.5 38.0 32.0 38.0 50-51 35.831816641885155 38.0 36.0 38.0 31.0 38.0 52-53 35.837533643259114 38.0 36.0 38.0 31.0 38.0 54-55 35.83675726035648 38.0 36.0 38.0 31.0 38.0 56-57 35.779479023545576 38.0 36.0 38.0 31.0 38.0 58-59 35.740843387099815 38.0 36.0 38.0 31.0 38.0 60-61 35.743365455195644 38.0 36.0 38.0 31.0 38.0 62-63 35.73381829816868 38.0 36.0 38.0 31.0 38.0 64-65 35.689409196137845 38.0 36.0 38.0 31.0 38.0 66-67 35.61492349099396 38.0 36.0 38.0 31.0 38.0 68-69 35.46569799175623 38.0 36.0 38.0 31.0 38.0 70-71 35.15924319135721 38.0 36.0 38.0 28.0 38.0 72-73 34.93566844215242 38.0 36.0 38.0 27.0 38.0 74-75 34.946984811127216 38.0 36.0 38.0 27.0 38.0 76 34.085524458414106 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 6.0 22 28.0 23 44.0 24 95.0 25 163.0 26 340.0 27 612.0 28 1011.0 29 1522.0 30 2292.0 31 3391.0 32 4844.0 33 6401.0 34 8809.0 35 12194.0 36 17509.0 37 47000.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63271912819258 17.712823022341006 8.956164950782028 29.698292898684386 2 22.129265400613576 18.46285595979748 34.16367092657771 25.244207713011235 3 20.621670964220513 20.174662626338673 30.76734862886074 28.43631778058008 4 14.481188007001562 18.65765748809546 33.77971429109183 33.08144021381115 5 14.809621501571588 32.21659671378291 36.729969321111966 16.24381246353353 6 32.011443413449776 37.51105757467392 15.879618301932958 14.597880709943349 7 28.593476501477483 27.465133349645214 19.620372287365193 24.32101786151211 8 25.87001938604581 36.30836987822551 17.155709472812482 20.66590126291619 9 24.01517005138243 13.904311983587736 19.169599668743295 42.91091829628654 10-11 26.28503133763716 24.585458583501158 26.21915642468615 22.910353654175527 12-13 25.379721819653312 20.449925655455385 26.510888182040617 27.659464342850693 14-15 23.81236942651183 21.20983982985451 21.70531328226459 33.27247746136907 16-17 26.655812990532834 26.042235229903447 22.18808228717698 25.11386949238674 18-19 26.450659690199696 24.215147465697992 23.191263104402328 26.142929739699987 20-21 24.127157403399146 23.882008620202893 23.068923980350455 28.921909996047507 22-23 24.16103593005966 25.455948504639476 23.33712898307956 27.0458865822213 24-25 26.381961566693647 25.849315841975496 23.05010257665017 24.718620014680695 26-27 25.95518623778961 26.045528975550997 23.331953097061977 24.66733168959741 28-29 24.004818279347273 25.71380173533342 23.917298752140933 26.36408123317837 30-31 24.065046771188197 26.098228905911803 23.352186106039788 26.484538216860216 32-33 25.814025710037452 23.823662268732 23.514520712954774 26.84779130827577 34-35 24.147860947469464 25.273380888746683 23.89988895371817 26.678869210065688 36-37 24.187856430332573 25.60651973424178 25.550055523140912 24.655568312284732 38-39 23.754493610133444 24.117276166456495 25.890722930116127 26.237507293293934 40-41 23.562044757297997 23.078334682200598 26.80309047448759 26.55653008601381 42-43 25.868137245675783 23.2223184205078 26.105757467391914 24.8037868664245 44-45 23.32865935141443 25.279968380041783 26.85343772938586 24.53793453915793 46-47 25.405601249741206 23.30795580734411 24.812256498089628 26.474186444825055 48-49 25.01740979842277 23.083510568218177 25.07340347443112 26.82567615892793 50-51 22.721669082080144 23.32865935141443 27.164461425533116 26.785210140972314 52-53 22.33253656057669 23.015753514897142 29.54066364269447 25.1110462818317 54-55 22.19937512939715 23.332423632154487 27.40302271743427 27.0651785210141 56-57 24.016581656659955 23.22608270124786 25.48935649620749 27.267979145884702 58-59 22.212079576894844 23.17855865690463 29.209406937569405 25.39995482863112 60-61 24.562402363968307 25.014116052775215 24.99200090342738 25.4314806798291 62-63 21.491690350266325 27.969546968812935 24.91906796408876 25.61969471683198 64-65 21.977282565733752 28.437729385857597 24.076810148500876 25.508177899907775 66-67 21.676140106529147 28.5228962376014 23.78037304022134 26.020590615648114 68-69 21.539214394609548 28.946377820857876 23.529577835915003 25.984829948617566 70-71 22.22948937531761 27.619468859987578 24.071634262483297 26.079407502211517 72-73 21.810713142986206 26.076584291656474 24.503585477404904 27.609117087952416 74-75 21.87188270501214 26.041764694810936 24.4052436430709 27.68110895710602 76 22.1960813837496 25.936835369181832 24.14127345617436 27.725809790894207 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 2.5 12 5.0 13 3.5 14 7.0 15 9.5 16 12.5 17 18.0 18 43.5 19 76.5 20 96.5 21 109.0 22 130.0 23 192.5 24 299.5 25 365.0 26 421.0 27 521.5 28 707.5 29 849.0 30 949.5 31 1043.0 32 1329.0 33 1622.0 34 1753.0 35 2048.0 36 2506.5 37 2801.0 38 2898.5 39 3376.5 40 4259.0 41 5206.0 42 5651.0 43 5955.5 44 6144.5 45 5762.0 46 5495.0 47 5358.0 48 4770.0 49 4110.5 50 3902.0 51 3672.5 52 3153.5 53 2868.0 54 2872.0 55 2762.0 56 2617.5 57 2504.5 58 2426.0 59 2358.5 60 2375.0 61 2313.5 62 2168.0 63 2300.5 64 2335.0 65 2247.5 66 2153.0 67 2048.0 68 1933.0 69 1739.5 70 1609.0 71 1557.0 72 1421.0 73 1274.5 74 1130.5 75 997.0 76 922.5 77 746.5 78 551.5 79 458.0 80 433.5 81 330.5 82 202.5 83 153.0 84 132.0 85 88.0 86 46.0 87 27.0 88 21.0 89 14.5 90 8.5 91 2.0 92 1.0 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 106262.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.657582202480654 #Duplication Level Percentage of deduplicated Percentage of total 1 63.043517111964974 33.19719184656792 2 20.76490036636583 21.86858895936459 3 8.05468680189438 12.72420997157968 4 3.2115092485032615 6.764412489883495 5 1.5405236350638907 4.056012497412057 6 0.8524707354123849 2.6933428695112083 7 0.5861853274953087 2.1606971447930587 8 0.4467875971763024 1.8821403700287966 9 0.3181127691895273 1.5075944363930662 >10 1.1687963542132072 8.951459599856957 >50 0.003574300777410419 0.12516233460691498 >100 0.007148601554820838 0.8610792192881744 >500 0.0 0.0 >1k 0.0017871503887052094 3.2081082607140843 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAACGCCATATCTCGTATGCCGT 3409 3.2081082607140843 No Hit TCTTATACACATCTCCGAGCCCACGAGACAACGCCATATCTCGTATGCCG 346 0.3256102840149819 No Hit CTCTTATACACATCTCCGAGCCCACGAGACAACGCCATATCTCGTATGCC 221 0.20797651088818206 No Hit CTTATACACATCTCCGAGCCCACGAGACAACGCCATACCTCGTATGCCGT 219 0.20609437051815324 No Hit CTTATACACATCTCCGAGCCCACGAGACAACGCCATAACTCGTATGCCGT 129 0.12139805386685738 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0037642807400575934 0.0 2 0.0 0.0 0.0 0.0037642807400575934 0.0 3 0.0 0.0 0.0 0.004705350925071992 0.0 4 0.0 0.0 0.0 0.00564642111008639 0.0 5 0.0 0.0 0.0 0.00564642111008639 0.0 6 0.0 0.0 0.0 0.00564642111008639 0.0 7 0.0 0.0 0.0 0.00564642111008639 0.0 8 0.0 0.0 0.0 0.00564642111008639 0.0 9 0.0 0.0 0.0 0.00564642111008639 0.0 10 0.0 0.0 0.0 0.006587491295100788 0.0 11 0.0 0.0 0.0 0.007528561480115187 0.0 12 0.0 0.0 0.0 0.007528561480115187 0.0 13 0.0 0.0 0.0 0.007528561480115187 0.0 14 0.0 0.0 0.0 0.008469631665129585 0.0 15 0.0 0.0 0.0 0.008469631665129585 0.0 16 0.0 0.0 0.0 0.008469631665129585 0.0 17 0.0 0.0 0.0 0.009410701850143983 0.0 18 0.0 0.0 0.0 0.009410701850143983 0.0 19 0.0 0.0 0.0 0.009410701850143983 0.0 20 0.0 0.0 0.0 0.01129284222017278 0.0 21 0.0 0.0 0.0 0.01129284222017278 9.410701850143983E-4 22 0.0 0.0 0.0 0.012233912405187179 9.410701850143983E-4 23 0.0 0.0 0.0 0.013174982590201577 9.410701850143983E-4 24 0.0 0.0 0.0 0.015057122960230374 9.410701850143983E-4 25 0.0 0.0 0.0 0.01693926333025917 9.410701850143983E-4 26 0.0 0.0 0.0 0.01693926333025917 9.410701850143983E-4 27 0.0 0.0 0.0 0.02917317573544635 9.410701850143983E-4 28 0.0 0.0 0.0 0.04611243906570552 9.410701850143983E-4 29 0.0 0.0 0.0 0.07246240424610867 9.410701850143983E-4 30 0.0 0.0 0.0 0.09693022905648303 9.410701850143983E-4 31 0.0 0.0 0.0 0.12516233460691498 9.410701850143983E-4 32 0.0 0.0 0.0 0.15245336997233253 9.410701850143983E-4 33 0.0 0.0 0.0 0.20515330033313883 9.410701850143983E-4 34 0.0 0.0 0.0 0.2983192486495643 9.410701850143983E-4 35 0.0 0.0 0.0 0.4197173025164217 9.410701850143983E-4 36 0.0 0.0 0.0 0.5900510060040278 9.410701850143983E-4 37 0.0 0.0 0.0 0.8723720615083473 9.410701850143983E-4 38 0.0 0.0 0.0 1.1753966610829836 9.410701850143983E-4 39 0.0 0.0 0.0 1.4614819973273607 9.410701850143983E-4 40 0.0 0.0 0.0 1.7626244565319682 9.410701850143983E-4 41 0.0 0.0 0.0 2.1192900566524253 9.410701850143983E-4 42 0.0 0.0 0.0 2.491953849918127 9.410701850143983E-4 43 0.0 0.0 0.0 2.889085467994203 9.410701850143983E-4 44 0.0 0.0 0.0 3.314449191620711 9.410701850143983E-4 45 0.0 0.0 0.0 3.768045020797651 9.410701850143983E-4 46 0.0 0.0 0.0 4.22352299034462 9.410701850143983E-4 47 0.0 0.0 0.0 4.70723306544202 9.410701850143983E-4 48 0.0 0.0 0.0 5.196589561649508 9.410701850143983E-4 49 0.0 0.0 0.0 5.732058496922701 9.410701850143983E-4 50 0.0 0.0 0.0 6.165891852214338 9.410701850143983E-4 51 0.0 0.0 0.0 6.5677288212154865 9.410701850143983E-4 52 0.0 0.0 0.0 7.016619299467354 9.410701850143983E-4 53 0.0 0.0 0.0 7.435395531798761 9.410701850143983E-4 54 0.0 0.0 0.0 7.894637782085788 9.410701850143983E-4 55 0.0 0.0 0.0 8.417872804953793 9.410701850143983E-4 56 0.0 0.0 0.0 8.951459599856957 9.410701850143983E-4 57 0.0 0.0 0.0 9.409760779958969 9.410701850143983E-4 58 0.0 0.0 0.0 9.882178012836198 9.410701850143983E-4 59 0.0 0.0 0.0 10.30660066627769 9.410701850143983E-4 60 0.0 0.0 0.0 10.7385518811993 9.410701850143983E-4 61 0.0 0.0 0.0 11.158269183715722 9.410701850143983E-4 62 0.0 0.0 0.0 11.604336451412546 9.410701850143983E-4 63 0.0 0.0 0.0 12.02687696448401 9.410701850143983E-4 64 0.0 0.0 0.0 12.423067512375074 9.410701850143983E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATCG 15 0.0022193359 70.00001 47 TACGGAC 20 7.895599E-5 70.0 38 TCGTATG 475 0.0 60.421055 40 CGTATGC 470 0.0 60.31915 41 CTCGTAT 465 0.0 60.215057 39 GTATGCC 480 0.0 59.062504 42 CGTCTTC 465 0.0 58.709682 48 ATATCTC 430 0.0 58.604652 35 TATCTCG 430 0.0 58.604652 36 TCTCGTA 430 0.0 58.604652 38 TATGCCG 485 0.0 58.45361 43 GCCGTCT 475 0.0 58.21053 46 CCGTCTT 470 0.0 58.085106 47 ATGCCGT 495 0.0 57.272728 44 ATCTCGT 440 0.0 57.272724 37 GTCTTCT 475 0.0 56.736843 49 TCTTCTG 480 0.0 56.145836 50 TTATGAC 25 2.3811404E-4 55.999996 50 ACTTATG 25 2.3811404E-4 55.999996 48 TCTGCTT 495 0.0 55.85859 53 >>END_MODULE