##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781143_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 68633 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79993589089796 34.0 34.0 34.0 31.0 34.0 2 32.87852782189326 34.0 34.0 34.0 31.0 34.0 3 32.99214663500066 34.0 34.0 34.0 31.0 34.0 4 33.1258141127446 34.0 34.0 34.0 31.0 34.0 5 33.05685311730509 34.0 34.0 34.0 31.0 34.0 6 36.08296300613407 38.0 36.0 38.0 32.0 38.0 7 35.93787245202745 38.0 36.0 38.0 32.0 38.0 8 35.59812335174042 38.0 36.0 38.0 31.0 38.0 9 35.61750178485568 38.0 36.0 38.0 31.0 38.0 10-11 35.573310215202596 37.5 36.0 38.0 31.0 38.0 12-13 35.510344877828445 37.0 36.0 38.0 31.0 38.0 14-15 35.52782917838358 38.0 36.0 38.0 31.0 38.0 16-17 35.43338481488497 37.0 35.5 38.0 31.0 38.0 18-19 35.44680401556103 37.0 36.0 38.0 31.0 38.0 20-21 35.363746302798944 37.0 35.0 38.0 31.0 38.0 22-23 35.443715122462955 37.0 36.0 38.0 31.0 38.0 24-25 35.41464018766483 37.0 36.0 38.0 31.0 38.0 26-27 35.14444217796104 37.0 35.0 38.0 28.5 38.0 28-29 35.07697463319394 37.0 35.0 38.0 27.0 38.0 30-31 35.12326431891364 37.0 35.0 38.0 27.0 38.0 32-33 35.03416723733481 37.0 35.0 38.0 27.0 38.0 34-35 35.085112118077305 37.0 35.0 38.0 27.0 38.0 36-37 34.997654189675515 37.0 35.0 38.0 27.0 38.0 38-39 35.00558040592718 37.0 35.0 38.0 27.0 38.0 40-41 35.02734107499308 37.0 35.0 38.0 27.0 38.0 42-43 34.973190739148805 37.0 35.0 38.0 27.0 38.0 44-45 34.957535005026735 37.0 35.0 38.0 27.0 38.0 46-47 34.97543455772005 37.0 35.0 38.0 27.0 38.0 48-49 34.97217082161643 37.0 35.0 38.0 27.0 38.0 50-51 34.84280885288418 37.0 34.5 38.0 27.0 38.0 52-53 34.86120379409322 37.0 35.0 38.0 27.0 38.0 54-55 34.86325819940845 37.0 35.0 38.0 27.0 38.0 56-57 34.78110384217505 37.0 34.0 38.0 27.0 38.0 58-59 34.77703145717075 37.0 34.0 38.0 27.0 38.0 60-61 34.803534742762224 37.0 34.0 38.0 27.0 38.0 62-63 34.74094094677487 37.0 34.0 38.0 27.0 38.0 64-65 34.65407311351682 37.0 34.0 38.0 27.0 38.0 66-67 34.634476126644614 37.0 34.0 38.0 27.0 38.0 68-69 34.55804787784302 37.0 34.0 38.0 26.5 38.0 70-71 34.53061209622193 37.0 34.0 38.0 26.5 38.0 72-73 34.51322250229481 37.0 34.0 38.0 26.0 38.0 74-75 34.506687744962335 37.0 34.0 38.0 26.0 38.0 76 33.390744976906156 37.0 34.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 2.0 21 2.0 22 20.0 23 54.0 24 114.0 25 200.0 26 381.0 27 673.0 28 1071.0 29 1720.0 30 2378.0 31 3441.0 32 4616.0 33 5973.0 34 7637.0 35 9695.0 36 12874.0 37 17779.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.514067576821645 18.826220622732503 9.476490900878586 25.183220899567267 2 24.868503489574987 22.107441026911253 29.31242988066965 23.711625602844112 3 21.588740110442497 23.038480031471742 29.04725132225023 26.32552853583553 4 15.6061952704967 18.370171783252953 35.35471274751213 30.668920198738213 5 14.720324042370288 34.55334897206883 34.51838037095858 16.207946614602307 6 30.75634170151385 37.250302332697096 18.13704777585127 13.856308189937785 7 29.612577040199323 29.80053327116693 21.307534276514215 19.279355412119532 8 26.213337607273466 34.97880028557691 19.330351288738655 19.477510818410966 9 25.486282109189457 16.713534305654715 20.79903253536928 37.00115104978654 10-11 25.880407384202936 25.17083618667405 26.91416665452479 22.034589774598228 12-13 25.935774335960836 23.09020442061399 26.147042967668614 24.826978275756563 14-15 24.02634301283639 23.842757857007562 23.525854909445894 28.605044220710152 16-17 24.55742864219836 26.971719143852084 24.61133856891 23.85951364503956 18-19 23.748779741523755 26.670843471799284 26.012996663412647 23.56738012326432 20-21 23.46684539507234 27.11377908586249 25.55111972374805 23.868255795317122 22-23 24.13197732869028 26.61256246994886 25.81192720702869 23.443532994332173 24-25 24.296621158917723 26.636603383212158 25.67350982763394 23.393265630236186 26-27 23.372867279588537 26.829659201841682 26.573222793699824 23.22425072486996 28-29 23.798318593096614 26.21115206970408 27.413197732869026 22.57733160433028 30-31 23.665000801363774 26.091676015910714 26.931650955079917 23.311672227645595 32-33 23.09384698322964 26.75607943700552 26.82747366427229 23.322599915492546 34-35 23.819445456267392 26.285460347063367 27.337432430463483 22.55766176620576 36-37 24.15237567933793 26.869727390613846 25.783515218626608 23.19438171142162 38-39 23.349554878848366 26.716739760756486 26.786676962976998 23.14702839741815 40-41 23.497442921043813 26.147771480191746 27.032185683271898 23.322599915492546 42-43 24.027800037882653 25.646554864278116 26.706540585432663 23.61910451240657 44-45 23.10914574621538 26.4522897148602 27.01761543280929 23.420949106115135 46-47 23.818716943744263 25.55184823627118 26.871184415660103 23.75825040432445 48-49 23.295644952136726 25.363892005303573 27.215770839100724 24.124692203458977 50-51 23.09311847070651 25.44257135780164 27.34981714335669 24.114493028135154 52-53 22.625413430856877 25.324552329054534 28.45132807832967 23.59870616175892 54-55 22.141681115498375 25.74126149228505 27.82043623329885 24.296621158917723 56-57 22.66038203196713 25.564961461687524 27.41028368277651 24.364372823568836 58-59 22.140952602975243 25.410516806783907 28.089257354333917 24.359273235906926 60-61 22.63706963122696 25.759474305363312 27.399355994929554 24.204100068480177 62-63 21.45177975609401 26.10406072880393 27.87726021010301 24.566899304999055 64-65 21.845905031107485 26.418778138796206 26.909067066862878 24.82624976323343 66-67 21.825506680459835 26.238107033059897 26.777934812699428 25.158451473780836 68-69 21.50423265775939 26.582693456500518 26.666472396660502 25.246601489079595 70-71 21.529002083545816 26.2213512450279 26.64898809610537 25.60065857532091 72-73 21.628079786691533 25.57734617458074 26.53971121763583 26.254862821091894 74-75 21.629536811737793 25.405417219121993 26.584150481546775 26.38089548759343 76 21.797094692057755 25.490653184328238 26.424606238981248 26.287645884632756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 0.5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 1.5 15 3.5 16 12.0 17 20.0 18 24.5 19 36.0 20 54.0 21 65.0 22 83.5 23 139.0 24 233.0 25 290.0 26 296.0 27 360.5 28 489.5 29 560.0 30 656.5 31 866.5 32 1192.0 33 1404.0 34 1512.5 35 1746.0 36 2103.0 37 2335.0 38 2587.0 39 3086.0 40 3611.5 41 3910.5 42 3931.0 43 3996.5 44 4066.5 45 4043.5 46 4016.0 47 3943.0 48 3604.5 49 3186.5 50 3034.0 51 2851.5 52 2399.0 53 1989.0 54 1849.0 55 1696.5 56 1427.5 57 1223.5 58 1136.0 59 1011.0 60 819.5 61 746.0 62 739.0 63 690.5 64 693.5 65 755.5 66 733.0 67 700.0 68 706.0 69 676.0 70 660.0 71 680.0 72 647.0 73 594.5 74 552.5 75 530.0 76 492.0 77 398.5 78 307.0 79 271.0 80 239.0 81 170.5 82 115.0 83 96.0 84 77.0 85 48.5 86 32.5 87 26.0 88 18.0 89 7.0 90 4.5 91 3.0 92 1.0 93 0.5 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 68633.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.05179724039456 #Duplication Level Percentage of deduplicated Percentage of total 1 76.9435796358098 50.05318141418851 2 12.894483391941227 16.776186382643917 3 4.316079467825386 8.423061792432211 4 2.150200461397182 5.594976177640493 5 1.0907787757296123 3.5478559876444278 6 0.7637691222254575 2.9810732446490755 7 0.47259614307792236 2.1520259933268253 8 0.3606065357134858 1.8766482595835823 9 0.27773422626380273 1.6260399516267683 >10 0.7279324478688377 6.390511852898752 >50 0.0 0.0 >100 0.0022397921472887316 0.5784389433654364 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTCTTATTAATCTCGTATGCCGT 397 0.5784389433654364 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0014570250462605451 0.0 5 0.0 0.0 0.0 0.0014570250462605451 0.0 6 0.0 0.0 0.0 0.0014570250462605451 0.0 7 0.0 0.0 0.0 0.0014570250462605451 0.0 8 0.0 0.0 0.0 0.0014570250462605451 0.0 9 0.0 0.0 0.0 0.0014570250462605451 0.0 10 0.0 0.0 0.0 0.0014570250462605451 0.0 11 0.0 0.0 0.0 0.0014570250462605451 0.0 12 0.0 0.0 0.0 0.0014570250462605451 0.0 13 0.0 0.0 0.0 0.0014570250462605451 0.0 14 0.0 0.0 0.0 0.0014570250462605451 0.0 15 0.0 0.0 0.0 0.0014570250462605451 0.0 16 0.0 0.0 0.0 0.0014570250462605451 0.0 17 0.0 0.0 0.0 0.0014570250462605451 0.0 18 0.0 0.0 0.0 0.0014570250462605451 0.0 19 0.0 0.0 0.0 0.0014570250462605451 0.0 20 0.0 0.0 0.0 0.0014570250462605451 0.0 21 0.0 0.0 0.0 0.0014570250462605451 0.0 22 0.0 0.0 0.0 0.0014570250462605451 0.0 23 0.0 0.0 0.0 0.0014570250462605451 0.0 24 0.0 0.0 0.0 0.0014570250462605451 0.0 25 0.0 0.0 0.0 0.0014570250462605451 0.0 26 0.0 0.0 0.0 0.0014570250462605451 0.0 27 0.0 0.0 0.0 0.004371075138781636 0.0 28 0.0 0.0 0.0 0.008742150277563272 0.0 29 0.0 0.0 0.0 0.013113225416344907 0.0 30 0.0 0.0 0.0 0.013113225416344907 0.0 31 0.0 0.0 0.0 0.016027275508866 0.0 32 0.0 0.0 0.0 0.03059752597147145 0.0 33 0.0 0.0 0.0 0.050995876619119085 0.0 34 0.0 0.0 0.0 0.07285125231302726 0.0 35 0.0 0.0 0.0 0.11073390351580144 0.0 36 0.0 0.0 0.0 0.16318680518118106 0.0 37 0.0 0.0 0.0 0.27246368365072193 0.0 38 0.0 0.0 0.0 0.4254513135080792 0.0 39 0.0 0.0 0.0 0.5784389433654364 0.0 40 0.0 0.0 0.0 0.7853364999344339 0.0 41 0.0 0.0 0.0 0.9936910815496919 0.0 42 0.0 0.0 0.0 1.2836390657555403 0.0 43 0.0 0.0 0.0 1.557559774452523 0.0 44 0.0 0.0 0.0 1.9349292614340041 0.0 45 0.0 0.0 0.0 2.4244896769775472 0.0 46 0.0 0.0 0.0 2.921335217752393 0.0 47 0.0 0.0 0.0 3.415266708434718 0.0 48 0.0 0.0 0.0 3.9325105998572116 0.0 49 0.0 0.0 0.0 4.448297466233445 0.0 50 0.0 0.0 0.0 4.910174405898037 0.0 51 0.0 0.0 0.0 5.379336470793933 0.0 52 0.0 0.0 0.0 5.832471260180962 0.0 53 0.0 0.0 0.0 6.303090350123119 0.0 54 0.0 0.0 0.0 6.8363615170544785 0.0 55 0.0 0.0 0.0 7.432284760975041 0.0 56 0.0 0.0 0.0 8.012180729386738 0.0 57 0.0 0.0 0.0 8.57459239724331 0.0 58 0.0 0.0 0.0 9.206941267320385 0.0 59 0.0 0.0 0.0 9.811606661518512 0.0 60 0.0 0.0 0.0 10.359448078912477 0.0 61 0.0 0.0 0.0 10.894176270890096 0.0 62 0.0 0.0 0.0 11.430361487913977 0.0 63 0.0 0.0 0.0 11.968003729984119 0.0 64 0.0 0.0 0.0 12.549356723442076 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTATAC 15 0.0022159729 70.0 43 CTTTGCG 15 0.0022159729 70.0 39 AATCTCG 85 0.0 57.64706 36 GTCGCAT 25 2.375168E-4 55.999996 64 TATGCCG 95 0.0 55.26316 43 TCGTATG 95 0.0 55.26316 40 GCCGTCT 95 0.0 55.26316 46 TCTCGTA 90 0.0 54.444447 38 GAATGCA 20 0.0069243433 52.5 2 ATTGTCG 20 0.0069243433 52.5 61 TACGACA 20 0.0069243433 52.5 49 AGACCCT 20 0.0069243433 52.5 31 TGCCTAC 20 0.0069243433 52.5 45 ATAAACG 20 0.0069243433 52.5 23 CTGATGC 20 0.0069243433 52.5 38 GATTAAC 20 0.0069243433 52.5 8 AAAATCG 20 0.0069243433 52.5 65 CGTATGC 100 0.0 52.499996 41 CTCGTAT 100 0.0 52.499996 39 CCGTCTT 100 0.0 52.499996 47 >>END_MODULE