##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781141_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 50063 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.71959331242634 34.0 34.0 34.0 31.0 34.0 2 32.97666939656033 34.0 34.0 34.0 32.0 34.0 3 32.961648323112875 34.0 34.0 34.0 32.0 34.0 4 32.994107424644945 34.0 34.0 34.0 33.0 34.0 5 33.05011685276551 34.0 34.0 34.0 33.0 34.0 6 36.43972594530891 38.0 37.0 38.0 34.0 38.0 7 36.368016299462674 38.0 37.0 38.0 34.0 38.0 8 36.3662385394403 38.0 37.0 38.0 34.0 38.0 9 36.43403311827098 38.0 37.0 38.0 34.0 38.0 10-11 36.427880870103664 38.0 37.0 38.0 34.0 38.0 12-13 36.37412859796656 38.0 37.0 38.0 34.0 38.0 14-15 36.34723248706629 38.0 37.0 38.0 34.0 38.0 16-17 36.34308770948604 38.0 37.0 38.0 34.0 38.0 18-19 36.350478397219504 38.0 37.0 38.0 34.0 38.0 20-21 36.294339132692805 38.0 37.0 38.0 34.0 38.0 22-23 36.343507180952 38.0 37.0 38.0 34.0 38.0 24-25 36.34669316661007 38.0 37.0 38.0 34.0 38.0 26-27 36.304516309450094 38.0 37.0 38.0 34.0 38.0 28-29 36.36402133312026 38.0 37.0 38.0 34.0 38.0 30-31 36.406567724666914 38.0 37.0 38.0 34.0 38.0 32-33 36.38772147094661 38.0 37.0 38.0 34.0 38.0 34-35 36.40871501907597 38.0 37.0 38.0 34.0 38.0 36-37 36.31573217745641 38.0 37.0 38.0 34.0 38.0 38-39 36.339622076184014 38.0 37.0 38.0 34.0 38.0 40-41 36.320256476839184 38.0 37.0 38.0 34.0 38.0 42-43 36.3921059465074 38.0 37.0 38.0 34.0 38.0 44-45 36.40078501088628 38.0 37.0 38.0 34.0 38.0 46-47 36.37011365679244 38.0 37.0 38.0 34.0 38.0 48-49 36.34820126640433 38.0 37.0 38.0 34.0 38.0 50-51 36.28542037033338 38.0 37.0 38.0 34.0 38.0 52-53 36.32360226115095 38.0 37.0 38.0 34.0 38.0 54-55 36.287867287218106 38.0 37.0 38.0 34.0 38.0 56-57 36.227733056349 38.0 37.0 38.0 34.0 38.0 58-59 36.23668178095599 38.0 37.0 38.0 34.0 38.0 60-61 36.242204821924375 38.0 37.0 38.0 34.0 38.0 62-63 36.20844735633102 38.0 37.0 38.0 34.0 38.0 64-65 36.20569082955476 38.0 37.0 38.0 34.0 38.0 66-67 36.157551485128735 38.0 37.0 38.0 34.0 38.0 68-69 35.8820685935721 38.0 37.0 38.0 32.0 38.0 70-71 36.11921978307333 38.0 37.0 38.0 34.0 38.0 72-73 36.13557917024549 38.0 37.0 38.0 34.0 38.0 74-75 36.155763737690506 38.0 37.0 38.0 34.0 38.0 76 35.160437848311126 38.0 36.0 38.0 28.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 8.0 14 42.0 15 61.0 16 100.0 17 129.0 18 147.0 19 155.0 20 122.0 21 117.0 22 125.0 23 142.0 24 153.0 25 200.0 26 189.0 27 241.0 28 324.0 29 410.0 30 550.0 31 677.0 32 999.0 33 1358.0 34 1925.0 35 3390.0 36 7447.0 37 31049.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.272956075345064 18.90018576593492 9.240357149991011 26.586501008729 2 22.703393723907876 20.803787228092606 31.448375047440223 25.044444000559295 3 18.239018836266304 22.273934842098956 30.431656113297244 29.055390208337496 4 12.676028204462378 17.106445878193476 37.74044703673371 32.477078880610435 5 11.966921678684857 34.410642590336174 37.26904100832951 16.353394722649462 6 27.357529512813855 39.32844615784112 19.089946667199328 14.224077662145696 7 27.103849150070914 31.272596528374248 22.63947426242934 18.984080059125503 8 24.15156902303098 35.379421928370256 20.23250704112818 20.236502007470587 9 23.654195713401112 16.187603619439507 21.211273795018275 38.946926872141105 10-11 23.31562231588199 25.371032499051193 28.62193636018617 22.69140882488065 12-13 23.885903761260813 23.738090006591694 27.169766094720654 25.206240137426843 14-15 22.064199109122505 24.849689391366876 24.699878153526555 28.386233345984056 16-17 22.059205401194497 27.95377823941833 25.716597087669534 24.270419271717635 18-19 21.26420709905519 28.34927990731678 26.8192077981743 23.567305195453727 20-21 21.164332940494976 28.039670015780118 27.233685556199188 23.562311487525715 22-23 21.500908854842898 27.59423126860156 27.33855342268741 23.566306453868126 24-25 21.136368176098117 27.73805005692827 27.78099594510916 23.34458582186445 26-27 20.939616083734496 27.664143179593715 27.48736591894213 23.90887481772966 28-29 21.2682020653976 27.782993428280367 28.240417074486146 22.708387431835884 30-31 21.447975550805985 27.941793340391108 27.42144897429239 23.188782134510515 32-33 20.81677086870543 28.010706509797657 27.642170864710465 23.530351756786448 34-35 21.6407326768272 27.359526995985057 27.79497832730759 23.204761999880148 36-37 21.79953258893794 27.49635459321255 27.17376106106306 23.530351756786448 38-39 21.19829015440545 28.24740826558536 27.688112977648167 22.866188602361028 40-41 21.51688872021253 26.929069372590536 28.014701476140065 23.539340431056868 42-43 21.202285120747856 27.567265245790306 27.83492799073168 23.39552164273016 44-45 20.81976709346224 27.414457783193175 27.769011046081935 23.99676407726265 46-47 21.27719073966802 27.0049737330963 27.768012304496338 23.949823222739347 48-49 20.765835047839722 27.442422547590034 28.085612128717813 23.706130275852427 50-51 21.05946507400675 27.22869184827118 27.83592673231728 23.87591634540479 52-53 21.078441164133192 26.918083215148915 27.963765655274354 24.03970996544354 54-55 20.41627549287897 27.46739108723009 28.39022831232647 23.726105107564468 56-57 20.323392525417976 27.347542096957834 28.194474961548448 24.134590416075742 58-59 20.6160238099994 27.251662904740027 28.16251523080918 23.969798054451392 60-61 20.164592613307235 27.194734634360707 28.238419591314944 24.402253161017118 62-63 19.647244471965326 27.16277490362144 29.059385174679903 24.130595449733335 64-65 20.53712322473683 27.20272456704552 28.16351397239478 24.096638235822862 66-67 20.268461738209854 26.904100832950483 28.206459860575674 24.62097756826399 68-69 20.044743623034975 26.471645726384757 28.149531590196354 25.334079060383917 70-71 20.472205021672693 26.892115933923254 28.015700217725666 24.619978826678384 72-73 20.58406407926013 26.425703613447055 27.9377983740487 25.05243393324411 74-75 20.707908035874798 26.47863691748397 27.769011046081935 25.044444000559295 76 20.502167269240758 26.452669636258314 28.238419591314944 24.806743503185984 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 1.0 12 2.0 13 3.0 14 3.0 15 4.0 16 6.5 17 7.0 18 12.5 19 26.5 20 44.5 21 54.0 22 69.5 23 106.0 24 153.0 25 179.0 26 231.0 27 306.0 28 411.5 29 494.0 30 545.5 31 645.0 32 891.5 33 1090.0 34 1185.5 35 1389.5 36 1695.0 37 1892.0 38 2049.0 39 2452.0 40 2929.5 41 3192.0 42 3223.0 43 3256.0 44 3311.0 45 3295.0 46 3257.0 47 3197.5 48 2893.5 49 2586.5 50 2524.0 51 2298.5 52 1880.5 53 1511.0 54 1334.0 55 1243.5 56 1074.0 57 883.5 58 772.0 59 654.0 60 485.0 61 392.5 62 351.0 63 306.5 64 248.5 65 237.5 66 230.0 67 220.0 68 218.5 69 214.0 70 201.5 71 192.0 72 181.5 73 169.0 74 172.0 75 177.0 76 141.0 77 102.5 78 88.0 79 76.0 80 67.0 81 55.0 82 42.0 83 32.0 84 29.5 85 19.5 86 9.5 87 7.0 88 5.5 89 3.5 90 2.5 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 50063.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.748716617062506 #Duplication Level Percentage of deduplicated Percentage of total 1 74.70580369082643 44.6357589437309 2 13.024872960684675 15.564388870023771 3 4.422974057234555 7.928010706509797 4 2.5006686279753945 5.976469648243214 5 1.497726664883659 4.474362303497593 6 1.0464027814923778 3.7512733955216424 7 0.7522064723188018 3.1460359946467453 8 0.4847552821610056 2.3170804785969676 9 0.3911473656057769 2.1033497792781097 >10 1.1700989569403584 9.971435990651779 >50 0.0033431398769724523 0.13183388929948267 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAG 66 0.13183388929948267 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0019974831712042825 0.0 2 0.0 0.0 0.0 0.0019974831712042825 0.0 3 0.0 0.0 0.0 0.0019974831712042825 0.0 4 0.0 0.0 0.0 0.0019974831712042825 0.0 5 0.0 0.0 0.0 0.0019974831712042825 0.0 6 0.0 0.0 0.0 0.0019974831712042825 0.0 7 0.0 0.0 0.0 0.0019974831712042825 0.0 8 0.0 0.0 0.0 0.0019974831712042825 0.0 9 0.0 0.0 0.0 0.0019974831712042825 0.0 10 0.0 0.0 0.0 0.0019974831712042825 0.0 11 0.0 0.0 0.0 0.0019974831712042825 0.0 12 0.0 0.0 0.0 0.0019974831712042825 0.0 13 0.0 0.0 0.0 0.0019974831712042825 0.0 14 0.0 0.0 0.0 0.0019974831712042825 0.0 15 0.0 0.0 0.0 0.0019974831712042825 0.0 16 0.0 0.0 0.0 0.0019974831712042825 0.0 17 0.0 0.0 0.0 0.0019974831712042825 0.0 18 0.0 0.0 0.0 0.0019974831712042825 0.0 19 0.0 0.0 0.0 0.0019974831712042825 0.0 20 0.0 0.0 0.0 0.0019974831712042825 0.0 21 0.0 0.0 0.0 0.0019974831712042825 0.0 22 0.0 0.0 0.0 0.003994966342408565 0.0 23 0.0 0.0 0.0 0.003994966342408565 0.0 24 0.0 0.0 0.0 0.005992449513612848 0.0 25 0.0 0.0 0.0 0.005992449513612848 0.0 26 0.0 0.0 0.0 0.005992449513612848 0.0 27 0.0 0.0 0.0 0.005992449513612848 0.0 28 0.0 0.0 0.0 0.005992449513612848 0.0 29 0.0 0.0 0.0 0.00798993268481713 0.0 30 0.0 0.0 0.0 0.011984899027225696 0.0 31 0.0 0.0 0.0 0.013982382198429979 0.0 32 0.0 0.0 0.0 0.017977348540838545 0.0 33 0.0 0.0 0.0 0.027964764396859958 0.0 34 0.0 0.0 0.0 0.03994966342408565 0.0 35 0.0 0.0 0.0 0.0699119109921499 0.0 36 0.0 0.0 0.0 0.10586660807382697 0.0 37 0.0 0.0 0.0 0.15180872101152548 0.0 38 0.0 0.0 0.0 0.23370553103090105 0.0 39 0.0 0.0 0.0 0.33957213910472805 0.0 40 0.0 0.0 0.0 0.4714060284042107 0.0 41 0.0 0.0 0.0 0.6172222999021233 0.0 42 0.0 0.0 0.0 0.7610410882288317 0.0 43 0.0 0.0 0.0 0.9807642370613028 0.0 44 0.0 0.0 0.0 1.2823841959131494 0.0 45 0.0 0.0 0.0 1.6099714359906518 0.0 46 0.0 0.0 0.0 2.0174580029163254 0.0 47 0.0 0.0 0.0 2.4269420530132035 0.0 48 0.0 0.0 0.0 2.848411002137307 0.0 49 0.0 0.0 0.0 3.3038371651718834 0.0 50 0.0 0.0 0.0 3.695343866727923 0.0 51 0.0 0.0 0.0 4.042905938517468 0.0 52 0.0 0.0 0.0 4.478357269840002 0.0 53 0.0 0.0 0.0 4.819926892115934 0.0 54 0.0 0.0 0.0 5.275353055150511 0.0 55 0.0 0.0 0.0 5.746759083554721 0.0 56 0.0 0.0 0.0 6.280087090266265 0.0 57 0.0 0.0 0.0 6.763478017697701 0.0 58 0.0 0.0 0.0 7.306793440265266 0.0 59 0.0 0.0 0.0 7.694305175478896 0.0 60 0.0 0.0 0.0 8.19567345145117 0.0 61 0.0 0.0 0.0 8.561212871781555 0.0 62 0.0 0.0 0.0 8.976689371392046 0.0 63 0.0 0.0 0.0 9.416135669056988 0.0 64 0.0 0.0 0.0 9.885544214289995 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGGACA 15 0.002212458 70.0 4 GGGACAG 30 8.264067E-6 58.333332 5 GCGAGAT 20 0.0069134445 52.5 62 CAGGTGC 20 0.0069134445 52.5 57 GGGGACA 20 0.0069134445 52.5 4 TAGAGCC 20 0.0069134445 52.5 4 GCTGGAC 20 0.0069134445 52.5 3 GTTAGCT 20 0.0069134445 52.5 45 GCTTGTT 20 0.0069134445 52.5 49 GATGGAA 20 0.0069134445 52.5 21 TTAGTCA 20 0.0069134445 52.5 37 TTGCATT 20 0.0069134445 52.5 10 TATACTC 20 0.0069134445 52.5 5 GTAAAGC 20 0.0069134445 52.5 15 CTAGAGC 30 5.825375E-4 46.666664 3 GGATGGA 35 0.0012442982 40.0 20 ATGAGTA 40 0.0023974665 35.0 57 CATACAC 50 1.6872656E-4 35.0 3 TGGCTCA 40 0.0023974665 35.0 5 TGTAAAG 40 0.0023974665 35.0 14 >>END_MODULE