SRR1781140_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781140_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111387
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGGTGC	15	0.0022196167	70.00001	55
TAGAAAG	20	0.006935643	52.5	63
TAAGTCA	20	0.006935643	52.5	4
TTATCGG	20	0.006935643	52.5	35
ATTCAGG	20	0.006935643	52.5	21
AACGCAC	20	0.006935643	52.5	32
GGTGCCC	20	0.006935643	52.5	57
ATCGGTG	20	0.006935643	52.5	54
TATCGGA	20	0.006935643	52.5	36
CGATATG	20	0.006935643	52.5	65
AATCGGT	20	0.006935643	52.5	53
TAACTCC	20	0.006935643	52.5	58
ATTAGAG	30	5.856431E-4	46.666668	3
AAAGTCT	30	5.856431E-4	46.666668	50
AGCCTTA	30	5.856431E-4	46.666668	6
AACCGAT	35	0.0012508916	40.000004	33
TCGTTGT	35	0.0012508916	40.000004	34
CCGATAC	35	0.0012508916	40.000004	44
ACCGATA	35	0.0012508916	40.000004	34
GGATAAA	35	0.0012508916	40.000004	6