##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781139_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 41154 Sequences flagged as poor quality 0 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.76143266754143 34.0 34.0 34.0 31.0 34.0 2 32.96863002381299 34.0 34.0 34.0 31.0 34.0 3 33.066627788307336 34.0 34.0 34.0 31.0 34.0 4 33.15570782912961 34.0 34.0 34.0 32.0 34.0 5 33.16416387228459 34.0 34.0 34.0 32.0 34.0 6 36.17993390678913 38.0 37.0 38.0 34.0 38.0 7 36.100063177333915 38.0 36.0 38.0 32.0 38.0 8 35.69830393157409 38.0 36.0 38.0 31.0 38.0 9 35.819434319871704 38.0 36.0 38.0 31.0 38.0 10-11 35.72966175827381 38.0 36.0 38.0 31.0 38.0 12-13 35.668853574379156 38.0 36.0 38.0 31.0 38.0 14-15 35.744775720464595 38.0 36.0 38.0 31.0 38.0 16-17 35.65314428731108 38.0 36.0 38.0 31.0 38.0 18-19 35.65203868396754 38.0 36.0 38.0 31.0 38.0 20-21 35.5537371822909 38.0 36.0 38.0 31.0 38.0 22-23 35.62051076444574 38.0 36.0 38.0 31.0 38.0 24-25 35.59855664090975 38.0 36.0 38.0 31.0 38.0 26-27 35.38704621664966 38.0 36.0 38.0 31.0 38.0 28-29 35.33352772513 38.0 36.0 38.0 31.0 38.0 30-31 35.36804441852554 38.0 36.0 38.0 31.0 38.0 32-33 35.28047091412742 37.5 36.0 38.0 31.0 38.0 34-35 35.29669047966176 37.5 36.0 38.0 30.5 38.0 36-37 35.24843271613938 37.0 35.5 38.0 29.0 38.0 38-39 35.249161685376876 37.5 36.0 38.0 30.0 38.0 40-41 35.25109345385624 37.0 36.0 38.0 30.0 38.0 42-43 35.21106089323031 37.0 35.5 38.0 28.5 38.0 44-45 35.19900860183701 37.0 35.0 38.0 27.0 38.0 46-47 35.231204743159836 37.0 35.5 38.0 28.5 38.0 48-49 35.24154395684502 37.0 35.5 38.0 29.5 38.0 50-51 35.08267726101958 37.0 35.0 38.0 27.0 38.0 52-53 35.11186032949409 37.0 35.0 38.0 27.0 38.0 54-55 35.14787140982651 37.0 35.0 38.0 27.0 38.0 56-57 35.055523156922774 37.0 35.0 38.0 27.0 38.0 58-59 35.08951742236478 37.0 35.0 38.0 27.0 38.0 60-61 35.0711838460417 37.0 35.0 38.0 27.0 38.0 62-63 35.04509889682655 37.0 35.0 38.0 27.0 38.0 64-65 34.994775720464595 37.0 35.0 38.0 27.0 38.0 66-67 34.9774870000486 37.0 35.0 38.0 27.0 38.0 68-69 34.88614715459008 37.0 35.0 38.0 27.0 38.0 70-71 34.856150070467024 37.0 35.0 38.0 27.0 38.0 72-73 34.83629780823249 37.0 35.0 38.0 27.0 38.0 74-75 34.814295086747336 37.0 35.0 38.0 27.0 38.0 76 33.82470719735627 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 1.0 21 3.0 22 8.0 23 27.0 24 57.0 25 94.0 26 223.0 27 305.0 28 577.0 29 824.0 30 1241.0 31 1719.0 32 2473.0 33 3237.0 34 4486.0 35 5824.0 36 8246.0 37 11808.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.337026777469994 19.878991106575302 9.32594644506002 25.45803567089469 2 21.550760557904454 22.447392720027214 33.571463284249404 22.430383437818925 3 20.017495261699956 24.51037566214706 30.361568741799093 25.11056033435389 4 14.139573310006318 19.098994022452253 37.335374447198326 29.426058220343105 5 13.468921611507994 35.7996792535355 36.26864946299266 14.462749671963843 6 30.04568207221655 38.963405744277594 17.927783447538516 13.063128735967341 7 27.406813432473147 31.1464256208388 23.00383923798416 18.442921708703892 8 24.031685862856587 38.146960198279636 19.567964231909414 18.25338970695437 9 24.228507556981096 16.409097536083976 21.95655343344511 37.40584147348982 10-11 24.415609661272295 26.485882295767123 28.305875492054234 20.79263255090635 12-13 24.241871993001894 23.97215337512757 28.355688389949947 23.43028624192059 14-15 22.095057588569762 24.978130922875057 24.7594401516256 28.16737133692958 16-17 22.800942800213832 29.04699421684405 25.778782135393886 22.373280847548234 18-19 22.61748554211012 28.65335082859503 26.828497837391264 21.90066579190358 20-21 22.3076736161734 28.302230645866743 26.809058657724645 22.581037080235212 22-23 22.55309325946445 28.185595567867033 27.30111289303591 21.9601982796326 24-25 22.798512902755505 27.670457306701657 27.35943043203577 22.17159935850707 26-27 22.25786071827769 28.02279243815911 27.891577975409437 21.82776886815376 28-29 21.951693638528454 27.839335180055404 28.545220391699473 21.663750789716673 30-31 22.481411284443798 28.22325897847111 27.445691791806386 21.84963794527871 32-33 21.615152840550127 28.338679107741655 27.68746658890995 22.35870146279827 34-35 22.413374155610633 27.330271662535843 28.01914759197162 22.237206589881907 36-37 22.232346794965252 27.88793312922195 27.686251640180785 22.193468435632017 38-39 21.917675074111873 27.846624872430382 28.320454876804195 21.915245176653546 40-41 21.724498226174855 27.353355688389954 28.915779754094377 22.006366331340818 42-43 22.299168975069254 27.414103124848133 28.462603878116344 21.824124021966274 44-45 21.757301841862272 27.693541332555764 28.4273703649706 22.12178646061136 46-47 22.481411284443798 27.50400933080624 27.99241871993002 22.022160664819946 48-49 21.550760557904454 27.49428974097293 28.49176264761627 22.463187053506342 50-51 21.768236380424746 27.68746658890995 28.625407007824272 21.918890022841037 52-53 21.33328473538417 27.655877921951692 29.490450502988775 21.520386839675364 54-55 21.300481119696748 27.38737425280653 29.19400301307285 22.118141614423873 56-57 21.728143072362347 27.366720124410747 28.10783884920056 22.79729795402634 58-59 21.240948631967733 27.366720124410747 29.457646887301358 21.934684356320165 60-61 21.63216212275842 28.336249210283327 28.121203285221362 21.91038538173689 62-63 20.957865578072603 28.622977110365944 28.563444622636926 21.855712688924527 64-65 20.903192885260243 28.721387957428195 28.075035233513145 22.300383923798417 66-67 20.87524906448948 28.81979880449045 27.920736744909362 22.384215386110707 68-69 20.876464013218644 28.925499343927687 28.071390387325657 22.12664625552802 70-71 21.35150896632162 28.586528648491033 27.616999562618457 22.444962822568886 72-73 21.308985760800894 28.071390387325657 27.82475579530544 22.794868056568014 74-75 21.100014579384748 27.699616076201583 27.957185206784274 23.24318413762939 76 21.541040968071147 27.892792924138604 27.426252612139766 23.139913495650482 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 0.5 10 0.0 11 1.0 12 2.0 13 3.5 14 3.0 15 15.0 16 42.0 17 55.0 18 64.5 19 88.0 20 140.0 21 178.0 22 185.0 23 245.5 24 358.0 25 417.0 26 440.5 27 492.5 28 601.5 29 682.0 30 785.5 31 954.0 32 1132.0 33 1245.0 34 1325.0 35 1480.5 36 1642.0 37 1728.0 38 1814.5 39 1999.0 40 2099.0 41 2137.5 42 2174.0 43 2255.0 44 2290.0 45 2134.5 46 2025.0 47 1993.0 48 1828.0 49 1574.0 50 1453.0 51 1391.5 52 1212.5 53 1055.5 54 1016.0 55 954.0 56 803.5 57 705.5 58 696.0 59 615.5 60 493.0 61 419.5 62 388.0 63 379.0 64 344.0 65 300.0 66 285.5 67 289.0 68 283.0 69 250.5 70 218.5 71 213.0 72 209.0 73 210.0 74 199.0 75 183.0 76 175.5 77 144.0 78 108.5 79 97.0 80 88.5 81 66.0 82 41.0 83 30.0 84 30.5 85 23.0 86 10.5 87 6.0 88 6.5 89 4.0 90 1.5 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 41154.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 78.10905379792973 #Duplication Level Percentage of deduplicated Percentage of total 1 81.96920205319645 64.02536812946494 2 13.093793747083527 20.45487680419886 3 3.0611292580494633 7.173057296982067 4 0.9457147301291025 2.954755309325946 5 0.41063929071395244 1.6037323224959907 6 0.20220874163944624 0.9476600087476309 7 0.11199253383107792 0.6123341594984691 8 0.07777259293824856 0.4859794916654517 9 0.052885363198009024 0.37177431112407056 >10 0.07155078550318868 0.7970063663313409 >50 0.0 0.0 >100 0.003110903717529942 0.573455800165233 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTACACCTCATCTCGTATGCCGT 236 0.573455800165233 No Hit TCTTATACACATCTCCGAGCCCACGAGACTACACCTCATCTCGTATGCCG 42 0.10205569324974485 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0024298974583272584 0.0 25 0.0 0.0 0.0 0.0024298974583272584 0.0 26 0.0 0.0 0.0 0.0024298974583272584 0.0 27 0.0 0.0 0.0 0.009719589833309034 0.0 28 0.0 0.0 0.0 0.014579384749963552 0.0 29 0.0 0.0 0.0 0.026728872041599846 0.0 30 0.0 0.0 0.0 0.036448461874908876 0.0 31 0.0 0.0 0.0 0.04373815424989065 0.0 32 0.0 0.0 0.0 0.05102784662487243 0.0 33 0.0 0.0 0.0 0.07289692374981775 0.0 34 0.0 0.0 0.0 0.09476600087476308 0.0 35 0.0 0.0 0.0 0.12878456529134472 0.0 36 0.0 0.0 0.0 0.17738251445788988 0.0 37 0.0 0.0 0.0 0.25513923312436215 0.0 38 0.0 0.0 0.0 0.3353258492491617 0.0 39 0.0 0.0 0.0 0.42766195266559753 0.0 40 0.0 0.0 0.0 0.5564465179569422 0.0 41 0.0 0.0 0.0 0.6414929289983963 0.0 42 0.0 0.0 0.0 0.7775671866647228 0.0 43 0.0 0.0 0.0 0.920931136706031 0.0 44 0.0 0.0 0.0 1.1420518054138116 0.0 45 0.0 0.0 0.0 1.3170044224133741 0.0 46 0.0 0.0 0.0 1.5624240657044273 0.0 47 0.0 0.0 0.0 1.7519560674539534 0.0 48 0.0 0.0 0.0 1.943917966661807 0.0 49 0.0 0.0 0.0 2.1480293531612964 0.0 50 0.0 0.0 0.0 2.3885892015356953 0.0 51 0.0 0.0 0.0 2.5708315109102395 0.0 52 0.0 0.0 0.0 2.755503717743111 0.0 53 0.0 0.0 0.0 2.9960635661175097 0.0 54 0.0 0.0 0.0 3.24391310686689 0.0 55 0.0 0.0 0.0 3.44802449336638 0.0 56 0.0 0.0 0.0 3.637556495115906 0.0 57 0.0 0.0 0.0 3.863536958740341 0.0 58 0.0 0.0 0.0 4.106526704573067 0.0 59 0.0 0.0 0.0 4.2790494241143024 0.0 60 0.0 0.0 0.0 4.466151528405502 0.0 61 0.0 0.0 0.0 4.655683530155027 0.0 62 0.0 0.0 0.0 4.85736501919619 0.0 63 0.0 0.0 0.0 5.046897020945716 0.0 64 0.0 0.0 0.0 5.241288817611896 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTAAG 15 0.0022096497 70.0 14 CGTATGC 60 1.8189894E-12 58.333332 41 CTCGTAT 60 1.8189894E-12 58.333332 39 TATGCCG 60 1.8189894E-12 58.333332 43 GTATGCC 60 1.8189894E-12 58.333332 42 TCGTATG 60 1.8189894E-12 58.333332 40 ATCTCGT 55 3.45608E-11 57.27273 37 CATCTCG 55 3.45608E-11 57.27273 36 ACACCTC 70 0.0 55.0 30 CCGTCTT 60 8.0035534E-11 52.5 47 TCTCGTA 60 8.0035534E-11 52.5 38 GGCTGAT 20 0.0069047357 52.5 65 ATGCCGT 70 7.2759576E-12 50.0 44 TGCCGTC 65 1.7644197E-10 48.461536 45 ACTACAC 80 0.0 48.125 27 TACACCT 80 0.0 48.125 29 ACCTCAT 75 1.4551915E-11 46.666668 32 CTTGAAA 75 1.4551915E-11 46.666668 57 CGTCTTC 60 4.7439244E-9 46.666664 48 GCCGTCT 60 4.7439244E-9 46.666664 46 >>END_MODULE