##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781135_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 251842 Sequences flagged as poor quality 0 Sequence length 76 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.49119686152429 34.0 34.0 34.0 31.0 34.0 2 32.68436956504475 34.0 34.0 34.0 31.0 34.0 3 32.6953724954535 34.0 34.0 34.0 31.0 34.0 4 32.79632070901597 34.0 34.0 34.0 31.0 34.0 5 32.788684969147326 34.0 34.0 34.0 31.0 34.0 6 35.97197846268692 38.0 37.0 38.0 32.0 38.0 7 35.887214999880875 38.0 37.0 38.0 32.0 38.0 8 35.947208964350665 38.0 37.0 38.0 32.0 38.0 9 36.1030765321114 38.0 37.0 38.0 34.0 38.0 10-11 36.0559040986015 38.0 37.0 38.0 34.0 38.0 12-13 36.002227587137966 38.0 37.0 38.0 33.0 38.0 14-15 35.95119162014279 38.0 37.0 38.0 32.0 38.0 16-17 35.945743759976494 38.0 37.0 38.0 32.5 38.0 18-19 35.979074181431216 38.0 37.0 38.0 33.0 38.0 20-21 35.95941503005853 38.0 37.0 38.0 32.5 38.0 22-23 35.98497073561995 38.0 37.0 38.0 33.0 38.0 24-25 36.00188014707634 38.0 37.0 38.0 33.0 38.0 26-27 35.949764137832446 38.0 37.0 38.0 32.0 38.0 28-29 36.02830941622128 38.0 37.0 38.0 33.5 38.0 30-31 36.08343127834118 38.0 37.0 38.0 34.0 38.0 32-33 36.054669197353896 38.0 37.0 38.0 33.5 38.0 34-35 36.077645904972165 38.0 37.0 38.0 34.0 38.0 36-37 35.985101770157485 38.0 37.0 38.0 33.0 38.0 38-39 36.005934276252574 38.0 37.0 38.0 33.0 38.0 40-41 35.99188380016042 38.0 37.0 38.0 33.0 38.0 42-43 36.066033465426734 38.0 37.0 38.0 34.0 38.0 44-45 36.06653179374369 38.0 37.0 38.0 34.0 38.0 46-47 36.042731156836425 38.0 37.0 38.0 33.5 38.0 48-49 36.014507111601716 38.0 37.0 38.0 33.5 38.0 50-51 35.950599979352134 38.0 37.0 38.0 32.5 38.0 52-53 35.99496708253588 38.0 37.0 38.0 33.5 38.0 54-55 35.96704481381184 38.0 37.0 38.0 32.5 38.0 56-57 35.912403411662865 38.0 37.0 38.0 32.0 38.0 58-59 35.91333653639981 38.0 37.0 38.0 32.0 38.0 60-61 35.922234972720986 38.0 37.0 38.0 32.0 38.0 62-63 35.89424123061285 38.0 37.0 38.0 32.0 38.0 64-65 35.90879996188086 38.0 37.0 38.0 32.0 38.0 66-67 35.83093169526926 38.0 37.0 38.0 32.0 38.0 68-69 35.595095337552905 38.0 37.0 38.0 31.0 38.0 70-71 35.78552822801598 38.0 37.0 38.0 31.5 38.0 72-73 35.79873889184489 38.0 37.0 38.0 31.5 38.0 74-75 35.827340157717934 38.0 37.0 38.0 32.0 38.0 76 34.884864319692504 37.0 35.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 20.0 14 43.0 15 153.0 16 264.0 17 395.0 18 514.0 19 600.0 20 666.0 21 707.0 22 788.0 23 916.0 24 1142.0 25 1450.0 26 1676.0 27 2126.0 28 2590.0 29 3187.0 30 3889.0 31 5090.0 32 6575.0 33 8914.0 34 13233.0 35 20751.0 36 39901.0 37 136250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.991931449083154 20.159067987071257 9.286377967138126 24.56262259670746 2 20.453697159330055 23.15062618625964 33.72312799294796 22.672548661462347 3 18.74032131256899 23.974158400902155 32.16064040152159 25.124879885007267 4 12.763955178246677 17.746841273496873 39.235314204938014 30.25388934331843 5 12.246170217834992 34.59470620468389 37.76852153334234 15.390602044138785 6 27.118590227205946 39.70822976310544 20.01294462401029 13.160235385678323 7 25.228913366316974 32.46321106090326 23.97257010347758 18.33530546930218 8 22.888557111204644 37.7871840280811 21.824000762382763 17.500258098331496 9 23.40951866646548 17.60389450528506 23.163332565656244 35.82325426259321 10-11 22.928066009640965 26.071505150054396 30.052572644753457 20.94785619555118 12-13 23.44565243287458 24.461964247424973 29.389855544349235 22.70252777535121 14-15 21.393373623144672 25.948213562471707 26.382017296558953 26.276395517824668 16-17 20.971680656919816 29.654505602719166 26.892257844203904 22.481555896157115 18-19 20.230144296821024 29.34220662161196 28.72237355167129 21.70527552989573 20-21 20.811262617037666 29.256835635041018 28.625487408772166 21.30641433914915 22-23 20.43682149919394 29.15180946784095 29.037253516093426 21.37411551687169 24-25 20.93058346105892 28.98444262672628 28.629259615155533 21.455714297059266 26-27 20.59029073784357 28.72952089008188 28.67571731482437 22.00447105725018 28-29 20.329611423035075 28.894703822237748 29.01303198036864 21.762652774358525 30-31 20.51484661017622 29.40017947760898 28.75731609501195 21.327657817202848 32-33 20.084219470938127 29.364045711199882 29.056710159544473 21.495024658317515 34-35 20.384010609826795 28.880806219772715 29.402164849389695 21.333018321010794 36-37 20.627417190143028 29.404150221170415 28.860555427609373 21.107877161077184 38-39 20.490029462917224 29.410106336512577 28.700335924905296 21.3995282756649 40-41 20.093749255485584 29.17662661509994 29.261997601670892 21.467626527743587 42-43 19.994877740805745 29.094233686200077 29.432541037634707 21.47834753535947 44-45 20.20671690980853 29.018193946998515 29.467483580975372 21.30760556221758 46-47 20.30161768092693 29.356898372789285 29.227253595508294 21.114230350775486 48-49 20.09494047855401 29.08450536447455 29.3298973165715 21.490656840399932 50-51 20.249600940272074 28.769426862874344 29.488925596207142 21.492046600646436 52-53 19.97839915502577 28.797619142160563 29.7357073085506 21.488274394263073 54-55 20.121345923237584 28.990200204890364 29.641799223322558 21.246654648549487 56-57 20.016319756037515 28.961015239713788 29.614202555570557 21.40846244867814 58-59 19.87754226856521 28.551433041351327 29.853042780791135 21.717981909292334 60-61 19.93988294247981 28.860753964787445 29.432541037634707 21.766822055098036 62-63 19.838231907306962 28.847054899500478 29.574693657134233 21.740019536058323 64-65 19.726455476052447 28.470826947054107 29.9679958068948 21.834721769998648 66-67 19.727249624764735 28.462488385575085 29.597723969790586 22.2125380198696 68-69 20.066946736445868 28.13073276101683 29.533794998451413 22.268525504085897 70-71 20.295860102762845 28.420597041001898 29.35392031511821 21.92962254111705 72-73 19.98852455110744 28.53396176968099 29.41447415443016 22.06303952478141 74-75 19.91288188626202 28.491077739217445 29.364641322734098 22.23139905178644 76 20.079256041486328 28.814494802296682 28.993178262561447 22.113070893655546 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 1.0 6 1.5 7 1.5 8 1.0 9 4.5 10 5.5 11 7.5 12 12.0 13 22.5 14 52.0 15 109.5 16 206.0 17 264.0 18 345.5 19 589.5 20 961.5 21 1171.0 22 1436.0 23 2087.5 24 2933.0 25 3392.0 26 3797.5 27 4796.0 28 5982.5 29 6576.0 30 7143.5 31 8159.5 32 9175.5 33 9743.0 34 10185.5 35 11023.0 36 11760.5 37 12103.0 38 12199.5 39 12404.0 40 12517.5 41 12305.0 42 12087.0 43 11854.5 44 11356.0 45 10700.0 46 10310.0 47 9992.0 48 9280.0 49 8435.0 50 7984.0 51 7612.0 52 6888.0 53 6350.5 54 6165.0 55 5934.0 56 5472.5 57 4927.0 58 4612.0 59 4200.5 60 3473.5 61 2831.0 62 2504.0 63 2185.5 64 1686.0 65 1352.5 66 1119.5 67 1039.0 68 957.5 69 830.5 70 732.0 71 679.0 72 611.5 73 539.0 74 497.5 75 461.0 76 401.0 77 344.0 78 305.5 79 264.0 80 221.5 81 164.0 82 119.5 83 90.0 84 85.0 85 59.0 86 37.5 87 37.0 88 27.0 89 13.0 90 8.5 91 6.0 92 4.0 93 5.0 94 3.0 95 0.5 96 1.0 97 0.5 98 0.0 99 4.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 251842.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.19557312096055 #Duplication Level Percentage of deduplicated Percentage of total 1 82.52203581791399 67.82946029161874 2 14.250343667191453 23.42630329790904 3 2.574336468489245 6.347971843009892 4 0.4864018511181709 1.5992031567901674 5 0.10460819415037222 0.42991652356692783 6 0.030971273930229856 0.15274209665889044 7 0.014770595639995079 0.08498543017771495 8 0.005372258791893095 0.03532607122830176 9 0.005347931909598496 0.03956186954891892 >10 0.005811940865066254 0.05452941949142136 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0011912230684317945 0.0 6 0.0 0.0 0.0 0.0011912230684317945 0.0 7 0.0 0.0 0.0 0.0011912230684317945 0.0 8 0.0 0.0 0.0 0.0011912230684317945 0.0 9 0.0 0.0 0.0 0.0011912230684317945 0.0 10 0.0 0.0 0.0 0.0011912230684317945 0.0 11 0.0 0.0 0.0 0.0019853717807196574 0.0 12 0.0 0.0 0.0 0.0019853717807196574 0.0 13 0.0 0.0 0.0 0.0027795204930075204 0.0 14 0.0 0.0 0.0 0.003573669205295384 0.0 15 0.0 0.0 0.0 0.004764892273727178 0.0 16 0.0 0.0 0.0 0.004764892273727178 0.0 17 0.0 0.0 0.0 0.004764892273727178 0.0 18 0.0 0.0 0.0 0.004764892273727178 0.0 19 0.0 0.0 0.0 0.004764892273727178 0.0 20 0.0 0.0 0.0 0.005956115342158973 0.0 21 0.0 0.0 0.0 0.005956115342158973 0.0 22 0.0 0.0 0.0 0.008735635835166494 0.0 23 0.0 0.0 0.0 0.008735635835166494 0.0 24 0.0 0.0 0.0 0.009132710191310425 0.0 25 0.0 0.0 0.0 0.011118081972030082 0.0 26 0.0 0.0 0.0 0.011515156328174014 0.0 27 0.0 0.0 0.0 0.012309305040461876 0.0 28 0.0 0.0 0.0 0.015088825533469397 0.0 29 0.0 0.0 0.0 0.02064786651948444 0.0 30 0.0 0.0 0.0 0.024618610080923753 0.0 31 0.0 0.0 0.0 0.029383502354650932 0.0 32 0.0 0.0 0.0 0.035339617696809905 0.0 33 0.0 0.0 0.0 0.0428840304635446 0.0 34 0.0 0.0 0.0 0.05201674065485503 0.0 35 0.0 0.0 0.0 0.062340673914597244 0.0 36 0.0 0.0 0.0 0.07941487122878631 0.0 37 0.0 0.0 0.0 0.12150475298004304 0.0 38 0.0 0.0 0.0 0.19972840114039755 0.0 39 0.0 0.0 0.0 0.29423209790265326 0.0 40 0.0 0.0 0.0 0.41891344573184774 0.0 41 0.0 0.0 0.0 0.5455801653417619 0.0 42 0.0 0.0 0.0 0.6595405055550703 0.0 43 0.0 0.0 0.0 0.7818394072474012 0.0 44 0.0 0.0 0.0 0.9077119781450275 0.0 45 0.0 0.0 0.0 1.0391435900286687 0.0 46 0.0 0.0 0.0 1.1908259940756507 0.0 47 0.0 3.9707435614393154E-4 0.0 1.3651416364228366 0.0 48 0.0 3.9707435614393154E-4 0.0 1.6014008783284759 0.0 49 0.0 3.9707435614393154E-4 0.0 1.8682348456571978 0.0 50 0.0 3.9707435614393154E-4 0.0 2.13506881298592 0.0 51 0.0 3.9707435614393154E-4 0.0 2.388402252205748 0.0 52 0.0 3.9707435614393154E-4 0.0 2.6274410146043947 0.0 53 0.0 3.9707435614393154E-4 0.0 2.8394787207852543 0.0 54 0.0 3.9707435614393154E-4 0.0 3.0515164269661135 0.0 55 0.0 3.9707435614393154E-4 0.0 3.270701471557564 0.0 56 0.0 3.9707435614393154E-4 0.0 3.485518698231431 0.0 57 0.0 3.9707435614393154E-4 0.0 3.705497891535169 0.0 58 0.0 3.9707435614393154E-4 0.0 3.9572430333304216 0.0 59 0.0 3.9707435614393154E-4 0.0 4.229636041645159 0.0 60 0.0 3.9707435614393154E-4 0.0 4.514735429356501 0.0 61 0.0 3.9707435614393154E-4 0.0 4.822468055368049 0.0 62 0.0 3.9707435614393154E-4 0.0 5.120273822475997 0.0 63 0.0 3.9707435614393154E-4 0.0 5.387107789804719 0.0 64 0.0 3.9707435614393154E-4 0.0 5.6178079907243434 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGATT 20 0.0069457656 52.5 46 TTCCCGT 45 0.0043021357 31.111113 45 ACCCTTA 60 4.973377E-4 29.166666 6 GGGAATC 50 0.007199848 27.999998 24 TACACTG 130 1.5972728E-7 24.230768 5 GGTTTAG 75 0.001829077 23.333334 38 GTTCGAG 90 1.9230583E-4 23.333334 56 GGTATAG 75 0.001829077 23.333334 1 GAGTTCG 75 0.001829077 23.333334 54 TTACACT 105 2.0324402E-5 23.333332 4 ATAATAC 185 4.0017767E-10 22.702703 3 AATACTC 95 2.7730592E-4 22.105263 5 TTTACAC 135 5.9939375E-6 20.74074 3 CTCCGTC 85 0.0037826698 20.588236 9 AGTTCGA 85 0.0037826698 20.588236 55 GTATAAG 140 8.209308E-6 20.000002 1 CCTAGAC 105 5.450295E-4 20.0 3 CTATACT 105 5.450295E-4 20.0 4 GGCCTGA 105 5.450295E-4 20.0 6 GACTCCG 105 5.450295E-4 20.0 7 >>END_MODULE