SRR1781135_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781135_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	237400
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCAAGAATTATCTCGTATGCCGT	573	0.24136478517270432	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCCGT	100	0.0	52.499996	44
TATGCCG	95	0.0	51.57895	43
CGTATGC	105	0.0	50.000004	41
TCGTATG	105	0.0	50.000004	40
GCCGTCT	100	0.0	48.999996	46
CGTCTTC	95	0.0	47.89474	48
ATCTCGT	100	0.0	45.499996	37
CCGTCTT	100	0.0	45.499996	47
CTCGTAT	110	0.0	44.545452	39
TCTCGTA	105	0.0	43.333336	38
TGCCGTC	120	0.0	40.833336	45
AGCGTCA	35	0.0012537575	40.0	3
GCGTCAG	35	0.0012537575	40.0	4
TATCTCG	120	0.0	37.916668	36
GCGCGGC	40	0.0024155814	35.0	31
CCGCGCG	40	0.0024155814	35.0	29
GTATGCC	155	0.0	31.612904	42
CGCGCGG	45	0.0043016453	31.111109	30
CTGCTTG	180	0.0	29.166664	54
GGAGACG	50	0.0071990304	27.999998	6