##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781134_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 110352 Sequences flagged as poor quality 0 Sequence length 76 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.26883065100768 34.0 34.0 34.0 32.0 34.0 2 33.259415325503845 34.0 34.0 34.0 32.0 34.0 3 33.29380527765695 34.0 34.0 34.0 33.0 34.0 4 33.35926852254603 34.0 34.0 34.0 33.0 34.0 5 33.35631433956793 34.0 34.0 34.0 33.0 34.0 6 36.76525119617225 38.0 37.0 38.0 34.0 38.0 7 36.65224916630419 38.0 37.0 38.0 34.0 38.0 8 36.46759460635059 38.0 37.0 38.0 34.0 38.0 9 36.423707771494854 38.0 37.0 38.0 34.0 38.0 10-11 36.31661410758301 38.0 37.0 38.0 34.0 38.0 12-13 36.260625090619115 38.0 37.0 38.0 34.0 38.0 14-15 36.25892145135566 38.0 37.0 38.0 34.0 38.0 16-17 36.16639480933739 38.0 37.0 38.0 33.0 38.0 18-19 36.142276533275336 38.0 37.0 38.0 33.0 38.0 20-21 36.090419747716396 38.0 36.5 38.0 32.5 38.0 22-23 36.15803066550674 38.0 37.0 38.0 33.0 38.0 24-25 36.14986588371756 38.0 37.0 38.0 33.0 38.0 26-27 35.933023415977964 38.0 36.0 38.0 31.5 38.0 28-29 35.91148778454401 38.0 36.0 38.0 31.0 38.0 30-31 35.94964749166304 38.0 37.0 38.0 32.0 38.0 32-33 35.907011200521964 38.0 36.0 38.0 31.5 38.0 34-35 35.88380364651297 38.0 36.0 38.0 31.5 38.0 36-37 35.78486117152385 38.0 36.0 38.0 31.0 38.0 38-39 35.441287878787875 38.0 36.0 38.0 31.0 38.0 40-41 35.706643286936355 38.0 36.0 38.0 31.0 38.0 42-43 35.81070574162679 38.0 36.0 38.0 31.0 38.0 44-45 35.7784045599536 38.0 36.0 38.0 31.0 38.0 46-47 35.806396802957806 38.0 36.0 38.0 31.0 38.0 48-49 35.76368348557344 38.0 36.0 38.0 31.0 38.0 50-51 35.649702769319994 38.0 36.0 38.0 31.0 38.0 52-53 35.642095295055825 38.0 36.0 38.0 31.0 38.0 54-55 35.68758608815427 38.0 36.0 38.0 31.0 38.0 56-57 35.63335055096418 38.0 36.0 38.0 31.0 38.0 58-59 35.5683766492678 38.0 36.0 38.0 31.0 38.0 60-61 35.565458713933594 38.0 36.0 38.0 31.0 38.0 62-63 35.549695519791214 38.0 36.0 38.0 31.0 38.0 64-65 35.4992116137451 38.0 36.0 38.0 31.0 38.0 66-67 35.43926254168479 38.0 36.0 38.0 31.0 38.0 68-69 35.28144483108598 38.0 36.0 38.0 29.5 38.0 70-71 34.96581847179933 38.0 35.5 38.0 27.0 38.0 72-73 34.694867333623314 38.0 35.5 38.0 25.0 38.0 74-75 34.72300003624764 38.0 36.0 38.0 25.0 38.0 76 33.80624728142671 37.0 34.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 5.0 22 15.0 23 40.0 24 115.0 25 242.0 26 414.0 27 724.0 28 1233.0 29 1825.0 30 2765.0 31 3837.0 32 5341.0 33 7166.0 34 9428.0 35 12992.0 36 18365.0 37 45843.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.87005219660722 16.79897056691315 9.03653762505437 29.294439611425254 2 23.773923444976077 19.245686530375526 31.988545744526604 24.991844280121793 3 20.538821226620268 20.07847614905031 30.81774684645498 28.56495577787444 4 14.787226330288531 19.455016673916194 33.74474409163405 32.01301290416123 5 14.67214006089604 31.9377990430622 36.57840365376251 16.811657242279253 6 30.13719733217341 38.35000724952878 16.969334493257936 14.543460925039872 7 28.96186747861389 27.50289981151225 20.15912715673481 23.376105553139045 8 25.185769175003625 36.13799478033928 17.69881832680876 20.97741771784834 9 24.084746991445556 15.330034797738145 18.71647092938959 41.86874728142671 10-11 26.10102218355807 24.684645498042627 26.35520878642888 22.859123531970422 12-13 25.31807307525011 20.722778019428738 25.847741771784833 28.11140713353632 14-15 23.813342757720747 21.37659489633174 21.429607075540087 33.380455270407424 16-17 26.610301580397273 26.009043787153836 22.4354791938524 24.945175438596493 18-19 26.47256053356532 24.14863346382485 22.924822386544875 26.453983616064956 20-21 23.937037842540235 23.83282586631869 23.066641293315936 29.16349499782514 22-23 24.232003044802088 25.775246483978542 23.35345077569958 26.639299695519792 24-25 26.270026823256487 25.920690155139916 23.11149775264608 24.697785268957517 26-27 25.70637596056256 26.40323691460055 23.42096201246919 24.469425112367695 28-29 23.97464477308975 25.839132956357837 24.241064955777876 25.94515731477454 30-31 23.883119472234306 28.31892489488183 23.408728432651877 24.389227200231986 32-33 23.373386979846313 26.883971291866025 25.716344062635926 24.026297665651732 34-35 24.29271784833986 25.817837465564736 23.667899086559373 26.22154559953603 36-37 26.76344787588807 25.472578657387267 23.099264172828764 24.664709293895896 38-39 23.76486153400029 24.159054661447005 25.993638538494995 26.082445266057707 40-41 23.418243439176454 22.91440118892272 27.00358851674641 26.663766855154414 42-43 25.72268740031898 23.138230390024646 26.399159054661446 24.739923154994926 44-45 22.55192474989126 26.00541902276352 26.962356821806583 24.48029940553864 46-47 25.16039582427142 23.17719660722053 24.967830216035956 26.694577352472088 48-49 24.976892127011745 23.046251993620416 24.937019718718282 27.039836160649557 50-51 22.629857184283022 23.186711613745107 27.012650427722196 27.170780774249675 52-53 21.94885457445266 23.006832680875743 29.954146730462522 25.090166014209075 54-55 21.446371610845294 23.37248078874873 27.72310424822387 27.45804335218211 56-57 23.62349572277802 23.297266927649705 25.45807959982601 27.621157749746267 58-59 21.916231694939828 23.259659997100187 29.135403073800205 25.68870523415978 60-61 24.001830506017107 25.26687327823691 25.17580107293026 25.555495142815715 62-63 20.71643468174569 28.17030955487893 25.14227200231985 25.970983761055532 64-65 21.27600768450051 28.606187472814266 24.133681310714802 25.984123531970422 66-67 21.373423227490214 28.38870160939539 23.772564158329708 26.465311004784688 68-69 20.961559373640714 29.016238944468608 23.833732057416267 26.188469624474408 70-71 21.535178338408002 27.914763665361754 23.836903726257795 26.71315426997245 72-73 21.398796578222417 26.259605625634336 24.313107148035378 28.028490648107873 74-75 21.259243149195303 26.378769754965926 24.666068580542262 27.69591851529651 76 21.74043062200957 26.088335508191967 24.06934174278672 28.101892127011745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 1.5 15 3.0 16 11.0 17 17.0 18 15.5 19 18.0 20 25.0 21 28.0 22 31.0 23 61.5 24 124.0 25 159.0 26 237.0 27 316.5 28 412.5 29 507.0 30 584.0 31 753.0 32 1131.5 33 1418.0 34 1530.5 35 1913.5 36 2428.5 37 2673.0 38 3362.0 39 4873.0 40 6259.0 41 6880.5 42 6938.0 43 6907.5 44 6592.0 45 6234.0 46 6161.0 47 6128.5 48 5699.5 49 4976.0 50 4649.0 51 4254.0 52 3471.0 53 2946.0 54 2809.0 55 2585.5 56 2193.5 57 1925.0 58 1825.0 59 1639.0 60 1435.0 61 1440.5 62 1464.0 63 1518.0 64 1525.0 65 1524.5 66 1577.0 67 1583.0 68 1637.0 69 1734.5 70 1722.0 71 1666.0 72 1673.0 73 1623.0 74 1422.0 75 1278.0 76 1195.5 77 1035.5 78 843.5 79 729.0 80 630.5 81 476.5 82 337.5 83 254.0 84 212.5 85 119.5 86 62.0 87 56.0 88 42.0 89 21.0 90 11.5 91 6.0 92 3.0 93 2.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 110352.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.24615774974627 #Duplication Level Percentage of deduplicated Percentage of total 1 60.21834335645286 26.042119762215453 2 18.951029901724535 16.391184573002754 3 8.05062548456719 10.444758590691606 4 3.801102193910693 6.575322604030738 5 2.2442009094147477 4.8526533275337105 6 1.4542254258952705 3.77337973031753 7 1.0665716740355804 3.2287588806727565 8 0.7815937807765648 2.704074235174714 9 0.5762420635752153 2.242822966507177 >10 2.830920101418603 18.896802957807743 >50 0.012572554114368334 0.33710308829926056 >100 0.010477128428640278 1.0629621574597652 >500 0.0 0.0 >1k 0.0020954256857280557 3.4480571262867916 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCCGT 3805 3.4480571262867916 No Hit TCTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCCG 374 0.3389154704944179 No Hit CTTATACACATCTCCGAGCCCACGAGACAAATACAGACCTCGTATGCCGT 265 0.24014064085834422 No Hit CTCTTATACACATCTCCGAGCCCACGAGACAAATACAGATCTCGTATGCC 241 0.21839205451645644 No Hit CTTATACACATCTCCGAGCCCACGAGACAAATACAGAACTCGTATGCCGT 192 0.17398869073510223 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004530955487893287 0.0 2 0.0 0.0 0.0 0.004530955487893287 0.0 3 0.0 0.0 0.0 0.004530955487893287 0.0 4 0.0 0.0 0.0 0.006343337683050601 0.0 5 0.0 0.0 0.0 0.007249528780629259 0.0 6 0.0 0.0 0.0 0.008155719878207917 0.0 7 0.0 0.0 0.0 0.008155719878207917 0.0 8 0.0 0.0 0.0 0.009061910975786574 0.0 9 0.0 0.0 0.0 0.009061910975786574 0.0 10 0.0 0.0 0.0 0.009061910975786574 0.0 11 0.0 0.0 0.0 0.009061910975786574 0.0 12 0.0 0.0 0.0 0.009061910975786574 0.0 13 0.0 0.0 0.0 0.009968102073365232 0.0 14 0.0 0.0 0.0 0.009968102073365232 0.0018123821951573148 15 0.0 0.0 0.0 0.009968102073365232 0.0018123821951573148 16 0.0 0.0 0.0 0.009968102073365232 0.0018123821951573148 17 0.0 0.0 0.0 0.009968102073365232 0.0018123821951573148 18 0.0 0.0 0.0 0.01087429317094389 0.0018123821951573148 19 0.0 0.0 0.0 0.016311439756415833 0.0018123821951573148 20 0.0 0.0 0.0 0.016311439756415833 0.0018123821951573148 21 0.0 0.0 0.0 0.01721763085399449 0.0018123821951573148 22 0.0 0.0 0.0 0.01812382195157315 0.0018123821951573148 23 0.0 0.0 0.0 0.019936204146730464 0.0018123821951573148 24 0.0 0.0 0.0 0.02174858634188778 0.0018123821951573148 25 0.0 0.0 0.0 0.02356096853704509 0.0018123821951573148 26 0.0 0.0 0.0 0.028998115122517036 0.0018123821951573148 27 0.0 0.0 0.0 0.04440336378135421 0.0018123821951573148 28 0.0 0.0 0.0 0.0616209946353487 0.0018123821951573148 29 0.0 0.0 0.0 0.08065100768450051 0.0018123821951573148 30 0.0 0.0 0.0 0.10149340292880962 0.0018123821951573148 31 0.0 0.0 0.0 0.12052341597796143 0.0018123821951573148 32 0.0 0.0 0.0 0.16039582427142235 0.0018123821951573148 33 0.0 0.0 0.0 0.2211106278091924 0.0018123821951573148 34 0.0 0.0 0.0 0.31807307525010875 0.0018123821951573148 35 0.0 0.0 0.0 0.44493982891112077 0.0018123821951573148 36 0.0 0.0 0.0 0.6388647237929534 0.0018123821951573148 37 0.0 0.0 0.0 0.9360954037987531 0.0018123821951573148 38 0.0 0.0 0.0 1.2260765550239234 0.0018123821951573148 39 0.0 0.0 0.0 1.5622734522256054 0.0018123821951573148 40 0.0 0.0 0.0 1.9401551399159054 0.0018123821951573148 41 0.0 0.0 0.0 2.3415977961432506 0.0018123821951573148 42 0.0 0.0 0.0 2.685044222125562 0.0018123821951573148 43 0.0 0.0 0.0 3.1807307525010873 0.0018123821951573148 44 0.0 0.0 0.0 3.700884442511237 0.0018123821951573148 45 0.0 0.0 0.0 4.256379585326954 0.0018123821951573148 46 0.0 0.0 0.0 4.844497607655502 0.0018123821951573148 47 0.0 0.0 0.0 5.488799478033928 0.0018123821951573148 48 0.0 0.0 0.0 6.124945628534145 0.0018123821951573148 49 0.0 0.0 0.0 6.66866028708134 0.0018123821951573148 50 0.0 0.0 0.0 7.235029723068001 0.0018123821951573148 51 0.0 0.0 0.0 7.7452153110047846 0.0018123821951573148 52 0.0 0.0 0.0 8.270806147600405 0.0018123821951573148 53 0.0 0.0 0.0 8.786428882122662 0.0018123821951573148 54 0.0 0.0 0.0 9.309301145425547 0.0018123821951573148 55 0.0 0.0 0.0 9.911012034217777 0.0018123821951573148 56 0.0 0.0 0.0 10.54897056691315 0.0018123821951573148 57 0.0 0.0 0.0 11.13618239814412 0.0018123821951573148 58 0.0 0.0 0.0 11.761454255473394 0.0018123821951573148 59 0.0 0.0 0.0 12.374945628534146 0.0018123821951573148 60 0.0 0.0 0.0 12.89872408293461 0.0018123821951573148 61 0.0 0.0 0.0 13.41072205306655 0.0018123821951573148 62 0.0 0.0 0.0 13.960780049296796 0.0018123821951573148 63 0.0 0.0 0.0 14.480027548209366 0.0018123821951573148 64 0.0 0.0 0.0 15.021929824561404 0.0018123821951573148 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATTG 15 0.0022195638 70.0 45 ACGTTAC 15 0.0022195638 70.0 17 TTACTCG 15 0.0022195638 70.0 20 ATATGTC 15 0.0022195638 70.0 11 GATCTTA 15 0.0022195638 70.0 1 TCGACAT 15 0.0022195638 70.0 69 TATGCCG 680 0.0 56.10294 43 CGTATGC 675 0.0 56.0 41 ACAGATC 575 0.0 56.0 33 CCATACA 25 2.3815445E-4 55.999996 2 TCGTATG 670 0.0 55.895523 40 TCTCGTA 595 0.0 55.88235 38 AGATCTC 580 0.0 55.517246 35 ATGCCGT 675 0.0 55.48148 44 CCGTCTT 665 0.0 55.263157 47 ATCTCGT 590 0.0 55.169495 37 TGCCGTC 675 0.0 54.962963 45 GCCGTCT 670 0.0 54.850746 46 GTATGCC 690 0.0 54.78261 42 CTCGTAT 665 0.0 54.736843 39 >>END_MODULE