SRR1781133_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781133_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	242989
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGCTT	35	2.0825717E-5	50.0	45
TCGTTGT	60	4.9130904E-9	46.666668	34
CATCGTT	60	4.9130904E-9	46.666668	32
GAACCGT	30	5.870202E-4	46.666668	69
TATACCG	30	5.870202E-4	46.666668	6
CAATACG	45	1.6802678E-6	46.666664	69
AACTACA	70	1.9175786E-8	40.0	46
CCTCGTA	40	0.0024156924	35.0	22
CTAGGGA	50	1.7065236E-4	35.0	4
GTACCAT	65	2.09724E-5	32.307693	6
GATCGTT	55	2.9865606E-4	31.81818	44
GACTGCA	55	2.9865606E-4	31.81818	7
AGGGATC	55	2.9865606E-4	31.81818	41
GTAGCAA	45	0.0043018414	31.111109	8
TACCTAG	45	0.0043018414	31.111109	33
AGTTAGA	45	0.0043018414	31.111109	36
ATACCGC	45	0.0043018414	31.111109	7
GCACTCG	45	0.0043018414	31.111109	9
GTATTTC	105	2.0127118E-8	29.999998	39
GTCTATG	60	4.9728673E-4	29.166668	2