##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781130_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 35764 Sequences flagged as poor quality 0 Sequence length 76 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.8916508220557 32.0 21.0 34.0 12.0 34.0 2 27.861984118107593 32.0 23.0 34.0 12.0 34.0 3 28.38521977407449 33.0 23.0 34.0 11.0 34.0 4 28.57817917458897 33.0 23.0 34.0 11.0 34.0 5 28.244603511911418 33.0 23.0 34.0 11.0 34.0 6 30.422519852365507 34.0 26.0 37.0 11.0 38.0 7 29.893104798121016 34.0 24.0 37.0 12.0 38.0 8 29.931215747679232 34.0 25.0 37.0 11.0 38.0 9 30.673526451179956 35.0 26.0 37.0 12.0 38.0 10-11 30.493582932557878 34.5 26.5 37.0 11.0 38.0 12-13 30.53966278939716 35.0 26.0 37.0 11.0 38.0 14-15 30.597807851470755 35.0 26.0 37.0 11.0 38.0 16-17 30.51693043283749 35.0 26.0 37.0 11.0 38.0 18-19 30.587811766021698 35.0 26.0 37.0 11.0 38.0 20-21 30.52266245386422 35.0 26.0 37.0 11.0 38.0 22-23 30.63552734593446 35.0 26.5 37.0 11.0 38.0 24-25 30.592649032546696 35.0 26.0 37.0 11.0 38.0 26-27 30.476316966782242 35.0 26.0 37.0 11.0 38.0 28-29 30.586986914215412 35.0 26.0 37.0 11.0 38.0 30-31 30.679482160832123 35.0 26.5 37.0 11.0 38.0 32-33 30.611201207918576 35.0 26.0 37.0 11.0 38.0 34-35 30.569133765798007 35.0 26.0 37.0 11.0 38.0 36-37 30.449012973940278 35.0 26.0 37.0 11.0 38.0 38-39 30.407938150095067 34.5 26.0 37.0 11.0 38.0 40-41 30.342816799015772 34.0 26.0 37.0 11.0 38.0 42-43 30.50574600156582 34.5 26.0 37.0 11.0 38.0 44-45 30.408469410580473 34.0 26.0 37.0 11.0 38.0 46-47 30.334470417179286 34.0 25.5 37.0 11.0 38.0 48-49 30.16129347947657 34.0 25.0 37.0 11.0 38.0 50-51 30.007311821943855 34.0 24.5 37.0 11.0 38.0 52-53 30.10057599821049 34.0 25.0 37.0 11.0 38.0 54-55 29.99117827983447 34.0 25.0 37.0 11.0 38.0 56-57 29.903268650039145 34.0 24.5 37.0 11.0 38.0 58-59 29.89729895984789 34.0 24.0 37.0 11.0 38.0 60-61 29.883653953696452 34.0 24.5 37.0 11.0 38.0 62-63 29.874818252991837 34.0 24.0 37.0 11.0 38.0 64-65 29.87230175595571 34.0 24.5 37.0 11.0 38.0 66-67 29.70460518957611 34.0 24.0 37.0 11.0 38.0 68-69 29.335253327368303 34.0 23.5 37.0 11.0 38.0 70-71 29.496812437087577 34.0 24.0 37.0 11.0 38.0 72-73 29.470682809529137 34.0 24.0 37.0 11.0 38.0 74-75 29.46886533944749 34.0 24.0 37.0 11.0 38.0 76 27.87188233978302 32.0 21.0 37.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 6.0 14 13.0 15 35.0 16 128.0 17 245.0 18 491.0 19 668.0 20 817.0 21 969.0 22 1108.0 23 1282.0 24 1374.0 25 1434.0 26 1660.0 27 1772.0 28 1853.0 29 2008.0 30 2144.0 31 2255.0 32 2350.0 33 2774.0 34 2793.0 35 3017.0 36 2884.0 37 1683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.60507773179734 19.581143048875965 11.223576781120679 28.59020243820602 2 22.51146404205346 20.892517615479253 30.676098870372442 25.919919472094843 3 18.188681355553072 21.359467621071467 29.7729560451851 30.678894978190357 4 12.88446482496365 17.34984901017783 35.44346269992171 34.322223464936805 5 12.4762330835477 32.893412369980986 36.304663907840286 18.325690638631027 6 27.821272788278716 37.579689072810645 18.708757409685717 15.890280729224918 7 27.605972486299073 28.221116206240914 22.069679006822504 22.10323230063751 8 24.203109271893524 34.713678559445256 19.57275472542221 21.510457443239012 9 23.38384968124371 17.0562576892965 20.80863438094173 38.75125824851806 10-11 23.154568840174477 25.170562576892962 27.456380718040485 24.218487864892072 12-13 23.66765462476233 23.034336204004028 27.200536852701042 26.097472318532606 14-15 21.96342690974164 24.491108377139025 24.358293255787945 29.187171457331395 16-17 22.405211944972596 27.24667263169668 25.304775752153002 25.043339671177723 18-19 21.023934682921375 27.028576221899115 26.98104238899452 24.966446706184993 20-21 21.352477351526673 27.172575774521867 26.539257353763563 24.9356895201879 22-23 21.825019572754726 26.26663684151661 27.22989598478917 24.678447600939492 24-25 21.265798009171235 27.33195392014316 26.898557208365954 24.50369086231965 26-27 20.72335309249525 27.531875629124258 27.35572083659546 24.389050441785034 28-29 21.388826753159602 27.078906162621628 28.351135219774076 23.181131864444694 30-31 21.27838049435186 27.169779666703946 27.32775975841629 24.224080080527905 32-33 20.842187674756737 27.40045856168214 27.369701375685047 24.387652387876077 34-35 21.805446818029303 27.05374119226037 27.2257018230623 23.915110166648027 36-37 21.82222346493681 27.043954814897663 27.20193490661 23.93188681355553 38-39 21.44614696342691 27.70942847556202 27.712224583379935 23.13219997763114 40-41 21.44335085560899 27.168381612794988 27.49832233530925 23.889945196286767 42-43 21.107817917458895 27.091488647802258 27.847835812548933 23.95285762218991 44-45 20.769488871490886 27.185158259702497 27.565428922939265 24.479923945867352 46-47 21.257409685717484 26.307180404876412 27.558438653394475 24.876971256011633 48-49 20.72335309249525 26.588189240577115 28.306397494687396 24.38206017224024 50-51 21.36785594452522 26.10026842635052 27.863214405547478 24.668661223576784 52-53 21.239234984901017 26.03455989262946 27.89397159154457 24.832233530924952 54-55 20.48708198188122 26.634325019572753 28.021194497259817 24.85739850128621 56-57 20.351470752712224 26.52807292249189 27.810088357007047 25.31036796778884 58-59 20.657644558774184 26.705625768929647 27.856224136002684 24.78050553629348 60-61 20.264791410356782 26.388267531596014 28.527290012302874 24.819651045744322 62-63 19.49725981433844 26.26663684151661 28.4350184543116 25.801084889833355 64-65 20.426965663795997 26.68185885247735 28.215523990605078 24.675651493121574 66-67 19.96001565820378 26.55183983894419 28.144223241248184 25.343921261603846 68-69 19.4748909517951 26.488927413041047 27.963874286992507 26.072307348171346 70-71 20.559780785147076 26.262442679789732 28.579018006934348 24.598758528128844 72-73 20.45632479588413 25.731182194385415 27.756962308466615 26.05553070126384 74-75 20.331897997986804 25.926909741639637 27.786321440554744 25.954870819818815 76 20.02852029974276 25.740968571748123 28.04496141371211 26.185549714797002 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 1.5 6 1.5 7 1.0 8 1.0 9 1.0 10 0.5 11 1.0 12 2.0 13 2.0 14 2.5 15 6.0 16 10.0 17 11.0 18 16.0 19 24.0 20 25.5 21 24.0 22 40.0 23 72.5 24 106.0 25 123.0 26 159.0 27 209.5 28 263.0 29 302.0 30 348.5 31 457.5 32 641.5 33 763.0 34 814.0 35 960.5 36 1138.0 37 1220.0 38 1383.0 39 1675.5 40 1941.0 41 2168.0 42 2259.0 43 2303.0 44 2308.0 45 2242.5 46 2216.0 47 2160.0 48 2004.5 49 1791.5 50 1678.0 51 1592.5 52 1368.0 53 1128.5 54 1028.0 55 934.5 56 763.5 57 604.0 58 522.0 59 457.0 60 408.5 61 369.0 62 313.0 63 285.5 64 258.0 65 252.0 66 241.0 67 236.0 68 224.5 69 213.5 70 204.0 71 194.0 72 192.0 73 182.0 74 161.5 75 149.0 76 135.0 77 110.5 78 91.0 79 82.0 80 77.0 81 65.5 82 51.5 83 44.0 84 35.5 85 22.0 86 15.0 87 13.0 88 11.5 89 9.0 90 8.0 91 4.0 92 0.0 93 1.5 94 3.0 95 2.0 96 1.0 97 1.0 98 0.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 35764.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.66972374454758 #Duplication Level Percentage of deduplicated Percentage of total 1 89.06852465670026 73.63270327703836 2 6.561591016708382 10.848898333519742 3 2.188324426706352 5.427245274577787 4 1.014679023202327 3.355329381500951 5 0.4938104579584658 2.041158707079745 6 0.22661164851518634 1.1240353428028185 7 0.14881959006967463 0.8612012079185773 8 0.09808563890955828 0.6486970137568504 9 0.04058716092809308 0.30197964433508556 >10 0.15896638030169788 1.7587518174700816 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.002796107817917459 0.0 29 0.0 0.0 0.0 0.005592215635834918 0.0 30 0.0 0.0 0.0 0.008388323453752377 0.0 31 0.0 0.0 0.0 0.008388323453752377 0.0 32 0.0 0.0 0.0 0.008388323453752377 0.0 33 0.0 0.0 0.0 0.011184431271669836 0.0 34 0.0 0.0 0.0 0.013980539089587294 0.0 35 0.0 0.0 0.0 0.02516497036125713 0.0 36 0.0 0.0 0.0 0.039145509450844426 0.0 37 0.0 0.0 0.0 0.05592215635834918 0.0 38 0.0 0.0 0.0 0.08667934235544122 0.0 39 0.0 0.0 0.0 0.15378592998546023 0.0 40 0.0 0.0 0.0 0.2097080863438094 0.0 41 0.0 0.0 0.0 0.304775752153003 0.0 42 0.0 0.0 0.0 0.4026395257801141 0.0 43 0.0 0.0 0.0 0.5480371323118219 0.0 44 0.0 0.0 0.0 0.713007493568952 0.0 45 0.0 0.0 0.0 0.8556089922827425 0.0 46 0.0 0.0 0.0 1.054132647354882 0.0 47 0.0 0.0 0.0 1.261044625880774 0.0 48 0.0 0.0 0.0 1.5182865451291803 0.0 49 0.0 0.0 0.0 1.7699362487417514 0.0 50 0.0 0.0 0.0 1.974052119449726 0.0 51 0.0 0.0 0.0 2.2508667934235542 0.0 52 0.0 0.0 0.0 2.4633709875852814 0.0 53 0.0 0.0 0.0 2.6898557208365954 0.0 54 0.0 0.0 0.0 2.9415054244491667 0.0 55 0.0 0.0 0.0 3.2742422547813446 0.0 56 0.0 0.0 0.0 3.5454647131193378 0.0 57 0.0 0.0 0.0 3.844648249636506 0.0 58 0.0 0.0 0.0 4.121462923610334 0.0 59 0.0 0.0 0.0 4.429034783581255 0.0 60 0.0 0.0 0.0 4.7729560451851025 0.0 61 0.0 0.0 0.0 5.044178503523096 0.0 62 0.0 0.0 0.0 5.3657309025836035 0.0 63 0.0 0.0 0.0 5.634157253103679 0.0 64 0.0 0.0 0.0 5.924952466167095 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGTT 20 0.0068973424 52.5 7 ATGAGTA 20 0.0068973424 52.5 2 TTCATTG 20 0.0068973424 52.5 31 ATCTGTC 60 4.8894866E-4 29.166666 66 TGAGTAG 50 0.007118762 28.000002 3 CCATATA 65 7.808692E-4 26.923079 1 >>END_MODULE