##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781130_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 34318 Sequences flagged as poor quality 0 Sequence length 76 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69462089865377 34.0 34.0 34.0 31.0 34.0 2 32.81315927501603 34.0 34.0 34.0 31.0 34.0 3 32.91704062008276 34.0 34.0 34.0 31.0 34.0 4 33.00609009849059 34.0 34.0 34.0 31.0 34.0 5 32.90075179206247 34.0 34.0 34.0 31.0 34.0 6 35.95192027507431 38.0 36.0 38.0 32.0 38.0 7 35.915525380266914 38.0 36.0 38.0 32.0 38.0 8 35.493968179963865 37.0 36.0 38.0 31.0 38.0 9 35.511713969345536 37.0 36.0 38.0 31.0 38.0 10-11 35.40251471530975 37.0 35.5 38.0 31.0 38.0 12-13 35.32172620782097 37.0 35.0 38.0 31.0 38.0 14-15 35.385628533131296 37.0 35.0 38.0 31.0 38.0 16-17 35.30593274666356 37.0 35.0 38.0 30.5 38.0 18-19 35.318375196689786 37.0 35.0 38.0 31.0 38.0 20-21 35.23324494434408 37.0 35.0 38.0 29.0 38.0 22-23 35.27902267031878 37.0 35.0 38.0 30.5 38.0 24-25 35.274578938166556 37.0 35.0 38.0 30.5 38.0 26-27 34.9911562445364 37.0 35.0 38.0 27.0 38.0 28-29 34.90548691648698 37.0 34.5 38.0 27.0 38.0 30-31 34.93944868582085 37.0 35.0 38.0 27.0 38.0 32-33 34.84710647473629 37.0 34.5 38.0 27.0 38.0 34-35 34.83935544029372 37.0 34.0 38.0 27.0 38.0 36-37 34.81956990500612 37.0 34.0 38.0 27.0 38.0 38-39 34.87923247275482 37.0 34.5 38.0 27.0 38.0 40-41 34.84340579287837 37.0 34.0 38.0 27.0 38.0 42-43 34.7717815723527 37.0 34.0 38.0 27.0 38.0 44-45 34.7779882277522 37.0 34.0 38.0 27.0 38.0 46-47 34.767760358995275 37.0 34.0 38.0 27.0 38.0 48-49 34.71956407716067 37.0 34.0 38.0 27.0 38.0 50-51 34.623448336150126 37.0 34.0 38.0 27.0 38.0 52-53 34.64600209802436 37.0 34.0 38.0 27.0 38.0 54-55 34.65143656390232 37.0 34.0 38.0 27.0 38.0 56-57 34.58195407657789 37.0 34.0 38.0 27.0 38.0 58-59 34.57570371233755 37.0 34.0 38.0 27.0 38.0 60-61 34.61492511218603 37.0 34.0 38.0 27.0 38.0 62-63 34.53989160207472 37.0 34.0 38.0 27.0 38.0 64-65 34.48984497931115 37.0 34.0 38.0 27.0 38.0 66-67 34.50407949181188 37.0 34.0 38.0 27.0 38.0 68-69 34.38306428113526 37.0 34.0 38.0 25.5 38.0 70-71 34.42626318550032 37.0 34.0 38.0 25.5 38.0 72-73 34.41389358354216 37.0 34.0 38.0 25.0 38.0 74-75 34.41677836703771 37.0 34.0 38.0 25.0 38.0 76 33.27067428171805 37.0 33.0 38.0 23.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 6.0 22 11.0 23 26.0 24 55.0 25 132.0 26 192.0 27 364.0 28 616.0 29 904.0 30 1365.0 31 1829.0 32 2376.0 33 3114.0 34 3937.0 35 5000.0 36 6709.0 37 7679.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.62381257649047 20.36540590943528 10.755288769741826 24.25549274433242 2 24.6954950754706 22.402237892651087 29.58214348155487 23.320123550323444 3 20.46739320473221 24.730462148143832 27.70557724809138 27.09656739903258 4 15.33888921265808 17.806981758843758 36.453173261845095 30.40095576665307 5 14.292790955183868 36.27542397575616 34.29104260155021 15.140742467509764 6 31.74136021912699 37.39728422402238 17.565126172853894 13.296229383996735 7 30.622413893583545 29.96095343551489 21.644617984731045 17.77201468617052 8 26.336033568389766 34.86217145521301 19.02208753423859 19.779707442158635 9 25.319074538143248 17.35240981409173 21.160906812751325 36.167608835013695 10-11 25.445830176583716 25.741593332944813 27.044116790022727 21.768459700448744 12-13 25.693513608019114 23.690191736115157 26.962526953785186 23.653767702080543 14-15 23.39297161839268 25.158808788390928 24.474036948540125 26.974182644676265 16-17 23.749927151931928 28.31604405851157 25.374439069875866 22.559589719680634 18-19 23.46873360918468 27.484119121160905 26.625968879305322 22.421178390349088 20-21 23.17297045282359 27.622530450492455 26.550206888513316 22.65429220817064 22-23 23.347805816189755 27.022262369601957 27.277230607844277 22.352701206364006 24-25 23.25893117314529 27.654583600442916 26.880937117547642 22.205548108864154 26-27 22.622239058220174 27.825048079724922 27.080540824057348 22.472172037997552 28-29 23.317209627600676 27.223323037473047 28.01299609534355 21.446471239582728 30-31 23.250189404976982 26.95669910833965 27.415641937175828 22.37746954950755 32-33 22.7723060784428 27.68080890494784 27.18689900343843 22.35998601317093 34-35 23.663966431610234 26.863453581211026 27.344250830467974 22.128329156710763 36-37 23.29681216854129 27.236435689725507 27.25246226470074 22.21428987703246 38-39 22.845154146512034 28.07710239524448 27.494317850690596 21.58342560755289 40-41 22.936942712279272 26.929016842473334 27.937234104551546 22.196806340695847 42-43 22.929657905472347 27.59776210734891 27.223323037473047 22.249256949705693 44-45 22.721312430794335 27.91975056821493 26.90279153796841 22.45614546302232 46-47 23.01124774170989 26.408881636459004 28.030479631680166 22.54939099015094 48-49 22.795617460224953 26.588087883909317 28.416574392447114 22.199720263418616 50-51 22.613497290051868 26.98875225829011 27.281601491928438 23.11614895972959 52-53 22.76647823299726 25.91497173494959 28.87843114400606 22.44011888804709 54-55 22.08170639314645 26.735240981409174 28.470481962818344 22.712570662626028 56-57 22.268197447403697 26.5895448452707 28.072731511160327 23.069526196165278 58-59 22.28568098374031 26.236960195815605 28.47776676962527 22.999592050818812 60-61 21.670843289235968 26.838685238067487 28.295646599452184 23.194824873244364 62-63 21.27309283757795 26.201993123142376 28.8463779940556 23.67853604522408 64-65 21.6679293665132 26.937758610641644 28.072731511160327 23.321580511684832 66-67 21.31097383297395 26.837228276706103 28.08730112477417 23.76449676554578 68-69 21.130310624162245 26.745439710938868 27.94451891135847 24.179730753540415 70-71 21.74951920275074 26.75563844046856 27.90081007051693 23.59403228626377 72-73 21.31971560114226 26.218019698117605 27.539483652893527 24.922781047846613 74-75 21.297861180721487 26.156827320939446 27.71577597762107 24.82953552071799 76 22.279853138294772 26.11457544145929 27.064514249082116 24.54105717116382 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 1.5 14 2.0 15 4.0 16 7.5 17 9.0 18 14.0 19 21.0 20 28.5 21 34.0 22 52.5 23 76.0 24 105.0 25 129.0 26 154.0 27 187.5 28 255.5 29 315.0 30 353.0 31 438.0 32 585.5 33 686.0 34 786.5 35 954.5 36 1137.5 37 1253.0 38 1335.5 39 1657.5 40 1992.5 41 2134.0 42 2180.0 43 2215.0 44 2297.5 45 2254.0 46 2163.0 47 2144.0 48 1962.5 49 1719.5 50 1639.0 51 1500.0 52 1217.0 53 994.5 54 916.0 55 822.5 56 660.0 57 528.5 58 466.0 59 398.5 60 325.0 61 307.0 62 295.0 63 276.5 64 232.0 65 215.0 66 224.5 67 225.0 68 229.0 69 222.5 70 202.0 71 192.0 72 186.5 73 188.0 74 171.0 75 147.0 76 126.0 77 99.5 78 92.0 79 90.0 80 76.5 81 51.5 82 33.5 83 27.0 84 21.5 85 14.5 86 9.0 87 5.0 88 6.0 89 6.5 90 3.5 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 34318.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.56908910775687 #Duplication Level Percentage of deduplicated Percentage of total 1 75.36219002755311 49.41430153272336 2 13.972091369656031 18.32274608077394 3 4.821793618345036 9.48481846261437 4 2.2886854501822063 6.002680808904948 5 1.3198826770953693 4.327175243312547 6 0.7199360056883832 2.8323328865318493 7 0.43107279352946404 1.9785535287604172 8 0.3421918051728735 1.7949763972259454 9 0.23109056972713538 1.3637158342560756 >10 0.506621633632566 4.303863861530393 >50 0.0044440494178295264 0.17483536336616354 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTGTGCCTTATCTCGTATGCCGT 60 0.17483536336616354 No Hit GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT 37 0.10781514074246751 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0029139227227693923 0.0 28 0.0 0.0 0.0 0.0029139227227693923 0.0 29 0.0 0.0 0.0 0.005827845445538785 0.0 30 0.0 0.0 0.0 0.005827845445538785 0.0 31 0.0 0.0 0.0 0.005827845445538785 0.0 32 0.0 0.0 0.0 0.005827845445538785 0.0 33 0.0 0.0 0.0 0.008741768168308177 0.0 34 0.0 0.0 0.0 0.017483536336616354 0.0 35 0.0 0.0 0.0 0.043708840841540884 0.0 36 0.0 0.0 0.0 0.06119237717815724 0.0 37 0.0 0.0 0.0 0.08450375896031237 0.0 38 0.0 0.0 0.0 0.15443790430677778 0.0 39 0.0 0.0 0.0 0.2535112768809371 0.0 40 0.0 0.0 0.0 0.35258464945509643 0.0 41 0.0 0.0 0.0 0.512850399207413 0.0 42 0.0 0.0 0.0 0.690599685296346 0.0 43 0.0 0.0 0.0 0.9033160440585115 0.0 44 0.0 0.0 0.0 1.136429861880063 0.0 45 0.0 0.0 0.0 1.419080365988694 0.0 46 0.0 0.0 0.0 1.6959030246517863 0.0 47 0.0 0.0 0.0 2.0543155195524214 0.0 48 0.0 0.0 0.0 2.4127280144530565 0.0 49 0.0 0.0 0.0 2.7740544320764613 0.0 50 0.0 0.0 0.0 3.0974998543038637 0.0 51 0.0 0.0 0.0 3.4879654991549622 0.0 52 0.0 0.0 0.0 3.8522058395011363 0.0 53 0.0 0.0 0.0 4.163995570837462 0.0 54 0.0 0.0 0.0 4.539891602074713 0.0 55 0.0 0.0 0.0 5.009033160440585 0.0 56 0.0 0.0 0.0 5.414068418905531 0.0 57 0.0 0.0 0.0 5.868640363657556 0.0 58 0.0 0.0 0.0 6.291159158459117 0.0 59 0.0 0.0 0.0 6.745731103211143 0.0 60 0.0 0.0 0.0 7.223614429745323 0.0 61 0.0 0.0 0.0 7.640305379101346 0.0 62 0.0 0.0 0.0 8.10070516929891 0.0 63 0.0 0.0 0.0 8.552363191328165 0.0 64 0.0 0.0 0.0 8.995279445189114 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCATCT 15 0.0022064976 70.0 56 TTTCGTT 15 0.0022064976 70.0 18 CGCGGCC 20 0.0068949624 52.5 63 CCCTAGA 20 0.0068949624 52.5 2 ATAGACC 20 0.0068949624 52.5 4 GGGGGAA 20 0.0068949624 52.5 64 GCCAACC 20 0.0068949624 52.5 12 GACAAAA 35 0.0012388163 40.000004 36 >>END_MODULE