##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781129_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 594292 Sequences flagged as poor quality 0 Sequence length 76 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50688550409563 34.0 33.0 34.0 23.0 34.0 2 31.705261050123507 34.0 34.0 34.0 24.0 34.0 3 31.66707948281316 34.0 34.0 34.0 23.0 34.0 4 31.854361155795466 34.0 34.0 34.0 27.0 34.0 5 31.881411831221016 34.0 34.0 34.0 27.0 34.0 6 34.789446938542 38.0 35.0 38.0 27.0 38.0 7 34.70178464458549 38.0 35.0 38.0 27.0 38.0 8 34.599022029574684 38.0 35.0 38.0 26.0 38.0 9 34.799998990395295 38.0 35.0 38.0 27.0 38.0 10-11 34.68326260491476 38.0 35.0 38.0 26.5 38.0 12-13 34.61348714100139 38.0 35.0 38.0 26.0 38.0 14-15 34.49709233844642 38.0 34.5 38.0 26.0 38.0 16-17 34.466402038055364 38.0 34.0 38.0 25.5 38.0 18-19 34.53130531792452 38.0 34.5 38.0 26.0 38.0 20-21 34.45876017176741 38.0 34.0 38.0 25.5 38.0 22-23 34.520284641220144 38.0 34.5 38.0 25.5 38.0 24-25 34.506624689546555 38.0 34.5 38.0 26.0 38.0 26-27 34.43366476412269 38.0 34.0 38.0 25.5 38.0 28-29 34.52585176983705 38.0 34.0 38.0 26.0 38.0 30-31 34.598750277641294 38.0 35.0 38.0 26.0 38.0 32-33 34.55669098692225 38.0 34.5 38.0 26.0 38.0 34-35 34.58601074892477 38.0 35.0 38.0 26.0 38.0 36-37 34.44791028652581 37.5 34.0 38.0 25.5 38.0 38-39 34.46332021968999 38.0 34.0 38.0 25.5 38.0 40-41 34.46596959070625 37.5 34.0 38.0 25.5 38.0 42-43 34.54468510429217 38.0 34.5 38.0 26.0 38.0 44-45 34.55328525371367 38.0 34.5 38.0 26.0 38.0 46-47 34.5473706528104 38.0 34.5 38.0 25.5 38.0 48-49 34.512342417532125 37.5 34.5 38.0 25.5 38.0 50-51 34.40215079455891 37.0 34.0 38.0 24.5 38.0 52-53 34.48026727601919 37.0 34.0 38.0 25.5 38.0 54-55 34.43536090002894 37.0 34.0 38.0 25.0 38.0 56-57 34.40398490977499 37.0 34.0 38.0 25.0 38.0 58-59 34.393846795851196 37.0 34.0 38.0 25.0 38.0 60-61 34.39384090649041 37.0 34.0 38.0 25.0 38.0 62-63 34.365434836746914 37.0 34.0 38.0 24.5 38.0 64-65 34.37371191266246 37.0 34.0 38.0 25.0 38.0 66-67 34.27167705437731 37.0 34.0 38.0 24.0 38.0 68-69 34.05019670465024 37.0 34.0 38.0 23.5 38.0 70-71 34.22903808228952 37.0 34.0 38.0 24.0 38.0 72-73 34.19230445639518 37.0 34.0 38.0 24.0 38.0 74-75 34.19759478505516 37.0 34.0 38.0 24.0 38.0 76 33.03793757950637 37.0 32.0 38.0 22.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 6.0 13 37.0 14 129.0 15 390.0 16 856.0 17 1537.0 18 2307.0 19 2798.0 20 3220.0 21 3824.0 22 4469.0 23 5505.0 24 6388.0 25 8005.0 26 9287.0 27 10931.0 28 13154.0 29 15746.0 30 18645.0 31 22757.0 32 27805.0 33 34088.0 34 43516.0 35 59026.0 36 90713.0 37 209153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.513693605163795 18.28427776244674 8.955193743143102 24.24683488924636 2 22.742187342249267 22.16637612486791 31.66389586263991 23.427540670242912 3 19.39029971798375 23.007040310150565 31.25214541000047 26.35051456186521 4 13.478222826489336 17.726134627422212 38.199235392702576 30.59640715338588 5 13.047289884433916 33.93836699804137 37.03751691087883 15.976826206645892 6 27.85499384141129 38.68990327986916 20.083393348724197 13.371709529995357 7 26.8024809352978 31.615771371648954 23.00603070544446 18.575716987608786 8 24.402482281437408 36.377740235439816 21.122781393658336 18.096996089464437 9 24.155633930794963 17.68188028780465 22.133059169566476 36.02942661183391 10-11 23.7281504714854 25.57362374051813 29.177155337780082 21.521070450216392 12-13 24.497805792438733 23.92535992407773 28.27288605601287 23.303948227470674 14-15 22.504930236314806 25.00260814549077 25.41318072597309 27.07928089222133 16-17 22.425507999434622 28.50803981880961 25.907045694708998 23.15940648704677 18-19 21.538317863945668 28.089306266952946 27.996843302618913 22.37553256648247 20-21 21.826307606361855 28.308727023079566 27.897902041420714 21.967063329137865 22-23 21.778098981645385 27.995581296736283 28.102851796759843 22.12346792485849 24-25 21.895886197357527 27.939800636724033 27.801653059438795 22.36266010647964 26-27 21.718532303985246 27.815619257873237 27.731990334717615 22.733858103423906 28-29 21.638184596124464 27.812338042578393 28.21584339011799 22.33363397117915 30-31 21.650720521225256 28.111181035585204 28.10781568656485 22.130282756624688 32-33 21.319233642721088 28.329423919554696 28.313017843080505 22.03832459464371 34-35 21.622703990630868 27.82849171787606 28.453184629777954 22.095619661715116 36-37 21.94645056638824 27.918514804170343 27.835390683367773 22.299643946073648 38-39 21.59594946591911 28.128091914412444 28.131962065785842 22.1439965538826 40-41 21.48750109373843 27.68033222725529 28.66461268198125 22.16755399702503 42-43 21.323860997624063 27.78087202923815 28.588050991768355 22.307215981369428 44-45 21.298200211343918 27.667207366075935 28.65064648354681 22.383945939033335 46-47 21.3019020952663 27.604780141748503 28.669744839237275 22.423572923747923 48-49 20.952999535581835 27.598049443707808 28.917097992232776 22.531853028477585 50-51 21.10368303796787 27.50659608407988 28.858709186729758 22.531011691222496 52-53 20.78111433436762 27.434830016220985 29.16756409307209 22.61649155633931 54-55 20.623700133940893 27.5407543766364 29.144595586008226 22.690949903414484 56-57 20.66896407826456 27.40900096248982 29.07897128011146 22.84306367913416 58-59 20.628495756294885 27.3273071150209 29.12145881149334 22.922738317190877 60-61 20.635478855512105 27.52140361976941 28.792075276126887 23.051042248591603 62-63 20.372476829571994 27.452582232303314 29.026303567943028 23.148637370181664 64-65 20.63514232061007 27.17182799028087 29.029416515786856 23.163613173322204 66-67 20.527871820586512 27.062117612217563 28.837255086725044 23.57275548047088 68-69 20.655923350810713 27.07869195614277 28.4516702227188 23.813714470327717 70-71 21.157865157195452 27.06413682162977 28.239484966985927 23.53851305418885 72-73 20.729372093179784 26.898561649828707 28.43122572742019 23.94084052957132 74-75 20.892928055568643 26.607627227019716 28.432824268204854 24.066620449206788 76 21.143814825035502 26.449119288161377 28.03504001399985 24.372025872803267 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.5 8 1.0 9 2.5 10 2.5 11 5.5 12 10.0 13 26.0 14 60.5 15 115.5 16 247.0 17 342.0 18 471.5 19 895.0 20 1525.5 21 1862.0 22 2333.5 23 3508.0 24 4780.5 25 5350.0 26 6277.0 27 8104.0 28 10151.0 29 11298.0 30 12486.0 31 14508.0 32 16576.5 33 17811.0 34 19017.5 35 21468.0 36 23913.5 37 25115.0 38 26084.0 39 27921.0 40 29214.0 41 29992.5 42 30346.0 43 30440.5 44 29985.0 45 28984.5 46 28534.0 47 27710.5 48 25813.0 49 23808.5 50 22878.0 51 21509.0 52 18899.5 53 16719.5 54 15780.0 55 15366.5 56 14073.5 57 12173.0 58 11152.0 59 10241.0 60 8555.0 61 7143.0 62 6506.0 63 5975.5 64 5011.0 65 4333.5 66 3861.5 67 3633.0 68 3353.0 69 2988.0 70 2784.0 71 2665.0 72 2475.5 73 2180.5 74 1986.0 75 1897.0 76 1803.0 77 1543.5 78 1240.5 79 1103.0 80 1013.5 81 815.5 82 608.5 83 510.0 84 428.5 85 285.5 86 185.0 87 146.0 88 111.0 89 73.5 90 50.0 91 22.5 92 16.0 93 12.5 94 9.5 95 9.0 96 8.0 97 6.0 98 4.0 99 7.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 594292.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.3266765199712 #Duplication Level Percentage of deduplicated Percentage of total 1 70.67040466333054 44.75321855650198 2 18.153601006819926 22.992144372630182 3 6.6266181707280145 12.58925115957169 4 2.2685239638646597 5.746323329498406 5 0.7753954431797052 2.4551608202650446 6 0.3585071314445091 1.3621839085853533 7 0.19951991019389767 0.8844452968499864 8 0.14770316634477493 0.7482840508872849 9 0.11740430508591414 0.6691342005204926 >10 0.670376852535089 7.326645850335144 >50 0.011945386472957327 0.47320845435437203 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.04802353052035E-4 0.0 2 0.0 0.0 0.0 5.04802353052035E-4 0.0 3 0.0 0.0 0.0 5.04802353052035E-4 0.0 4 0.0 0.0 0.0 0.001177872157121415 0.0 5 0.0 0.0 0.0 0.0018509419611907952 0.0 6 0.0 0.0 0.0 0.0018509419611907952 0.0 7 0.0 0.0 0.0 0.0018509419611907952 0.0 8 0.0 0.0 0.0 0.00201920941220814 0.0 9 0.0 0.0 0.0 0.0031970815693295553 0.0 10 0.0 0.0 0.0 0.0033653490203469 0.0 11 0.0 0.0 0.0 0.003870151373398935 0.0 12 0.0 0.0 0.0 0.004206686275433625 0.0 13 0.0 0.0 0.0 0.0043749537264509706 0.0 14 0.0 0.0 0.0 0.0043749537264509706 0.0 15 0.0 0.0 0.0 0.004543221177468315 0.0 16 0.0 0.0 0.0 0.004543221177468315 0.0 17 0.0 0.0 0.0 0.004879756079503006 0.0 18 0.0 0.0 0.0 0.00504802353052035 0.0 19 0.0 0.0 0.0 0.005216290981537695 0.0 20 0.0 0.0 0.0 0.005552825883572385 0.0 21 0.0 0.0 0.0 0.00605762823662442 0.0 22 0.0 0.0 0.0 0.006394163138659111 0.0 23 0.0 0.0 0.0 0.006562430589676455 0.0 24 0.0 0.0 0.0 0.00841337255086725 0.0 25 0.0 0.0 0.0 0.008918174903919286 0.0 26 0.0 0.0 0.0 0.00942297725697132 0.0 27 0.0 0.0 0.0 0.011946989022231496 0.0 28 0.0 0.0 0.0 0.017331547454786538 0.0 29 0.0 0.0 0.0 0.028773734123965996 0.0 30 0.0 0.0 0.0 0.039879385891110765 0.0 31 0.0 0.0 0.0 0.05283597961944633 0.0 32 0.0 0.0 0.0 0.06831658511304207 0.0 33 0.0 0.0 0.0 0.08346065570460312 0.0 34 0.0 0.0 0.0 0.11341226198569053 0.0 35 0.0 0.0 0.0 0.14942149650340236 0.0 36 0.0 0.0 0.0 0.21168045337982003 0.0 37 0.0 0.0 0.0 0.30691983065563727 0.0 38 0.0 0.0 0.0 0.456509594610057 0.0 39 0.0 0.0 0.0 0.666675640930721 0.0 40 0.0 0.0 0.0 0.9066250260814549 0.0 41 0.0 0.0 0.0 1.1425359924077727 0.0 42 0.0 0.0 0.0 1.3693605163791538 0.0 43 0.0 0.0 0.0 1.6044301454503846 0.0 44 0.0 0.0 0.0 1.8595236011926797 0.0 45 0.0 0.0 0.0 2.15735698949338 0.0 46 0.0 0.0 0.0 2.509709031923701 0.0 47 0.0 0.0 0.0 2.8793926218088077 0.0 48 0.0 0.0 0.0 3.2990516446460663 0.0 49 0.0 0.0 0.0 3.7673399608273375 0.0 50 0.0 0.0 0.0 4.220820741319082 0.0 51 0.0 0.0 0.0 4.6583161139641796 0.0 52 0.0 0.0 0.0 5.046172588559159 0.0 53 0.0 0.0 0.0 5.410303352560694 0.0 54 0.0 0.0 0.0 5.760467918127789 0.0 55 0.0 0.0 0.0 6.128805368404757 0.0 56 0.0 0.0 0.0 6.500844702604107 0.0 57 0.0 0.0 0.0 6.88600889798281 0.0 58 0.0 0.0 0.0 7.3147543631750045 0.0 59 0.0 0.0 0.0 7.740639281699905 1.6826745101734502E-4 60 0.0 0.0 0.0 8.199168085722171 1.6826745101734502E-4 61 0.0 0.0 0.0 8.636326923465232 1.6826745101734502E-4 62 0.0 0.0 0.0 9.066923330618618 1.6826745101734502E-4 63 0.0 0.0 0.0 9.443337618544419 1.6826745101734502E-4 64 0.0 0.0 0.0 9.812852940978509 1.6826745101734502E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGGT 20 0.0069503943 52.499996 53 CGCGGTA 35 2.0862488E-5 50.0 43 ACCCGAT 40 4.592116E-5 43.749996 27 GGTCGAT 50 1.7094912E-4 35.000004 10 TTAACGG 50 1.7094912E-4 35.000004 35 TTTAACG 55 2.9917283E-4 31.81818 34 TAACCGT 55 2.9917283E-4 31.81818 53 GTCGATG 45 0.004306803 31.111113 11 CGACACT 45 0.004306803 31.111113 45 CCGTGCA 60 4.98143E-4 29.166666 56 TAACGGC 60 4.98143E-4 29.166666 36 TAGCTCG 60 4.98143E-4 29.166666 36 GCGGTAC 70 0.0012258578 25.0 44 CGTAACA 75 0.0018319943 23.333334 23 CGGTACC 75 0.0018319943 23.333334 45 TAGGACC 120 2.1660107E-6 23.333332 4 CGAACCG 80 0.0026656466 21.874998 69 ACGGCCG 85 0.0037886412 20.588236 38 CACCCGA 85 0.0037886412 20.588236 26 GGTATAC 155 8.7346416E-7 20.32258 1 >>END_MODULE