SRR1781128_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781128_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	218757
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCACG	20	0.006944552	52.5	45
GATCATA	20	0.006944552	52.5	1
ATTTGCG	30	5.868912E-4	46.666664	31
CGACGAA	75	7.512426E-10	42.0	70
ACTATCG	35	0.0012535414	40.0	17
TTTTACG	45	9.177487E-5	38.88889	50
GATTTGC	50	1.7059683E-4	35.000004	30
CGTAGTG	50	1.7059683E-4	35.000004	54
GGTACCC	40	0.0024151679	35.0	16
GGCAAGC	40	0.0024151679	35.0	13
TTGCGTT	40	0.0024151679	35.0	33
GGGCATA	40	0.0024151679	35.0	47
GCCGTTT	40	0.0024151679	35.0	12
TCTAGCA	75	1.4845336E-6	32.666668	3
AGCCTCG	55	2.9855943E-4	31.81818	10
TTTAGAA	45	0.0043009124	31.111113	32
AAAGTCC	45	0.0043009124	31.111113	29
ACGATTC	45	0.0043009124	31.111113	65
GGCGCTA	45	0.0043009124	31.111113	8
GCGCTAT	45	0.0043009124	31.111113	9