SRR1781127_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781127_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114714
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTCTA	15	0.0022197876	70.00001	1
CTCGCTT	15	0.0022197876	70.00001	45
CACGTGA	15	0.0022197876	70.00001	20
TGCTTAG	20	0.006936173	52.5	12
GTGTAAC	20	0.006936173	52.5	1
GCAATTT	20	0.006936173	52.5	54
CCCTATA	50	1.7009205E-4	35.0	2
CTCGAAT	40	0.0024103958	35.0	12
TATACTC	40	0.0024103958	35.0	5
AACAGGT	40	0.0024103958	35.0	34
AGAGCAA	40	0.0024103958	35.0	69
CAGGTAA	45	0.004292465	31.111113	4
ATAGCAC	45	0.004292465	31.111113	6
TGGCAAT	45	0.004292465	31.111113	27
CTAACCG	45	0.004292465	31.111113	21
TCGCTTC	45	0.004292465	31.111113	46
ACAATTA	45	0.004292465	31.111113	35
CGAATAA	45	0.004292465	31.111113	14
ACTCAGC	45	0.004292465	31.111113	8
TGTTATC	50	0.0071837637	27.999998	2