##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781127_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 108629 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.22820793710704 34.0 34.0 34.0 32.0 34.0 2 33.25374439606367 34.0 34.0 34.0 32.0 34.0 3 33.307579007447366 34.0 34.0 34.0 33.0 34.0 4 33.37277338463946 34.0 34.0 34.0 33.0 34.0 5 33.380009021532004 34.0 34.0 34.0 33.0 34.0 6 36.78815969952775 38.0 37.0 38.0 34.0 38.0 7 36.67623746881588 38.0 37.0 38.0 34.0 38.0 8 36.463725156265824 38.0 37.0 38.0 34.0 38.0 9 36.45309263640464 38.0 37.0 38.0 34.0 38.0 10-11 36.34446602656749 38.0 37.0 38.0 34.0 38.0 12-13 36.304527336162536 38.0 37.0 38.0 34.0 38.0 14-15 36.295915455357225 38.0 37.0 38.0 34.0 38.0 16-17 36.2353008865036 38.0 37.0 38.0 34.0 38.0 18-19 36.20673116755194 38.0 37.0 38.0 33.5 38.0 20-21 36.16011838459343 38.0 37.0 38.0 33.0 38.0 22-23 36.22635299965939 38.0 37.0 38.0 34.0 38.0 24-25 36.21356175606882 38.0 37.0 38.0 34.0 38.0 26-27 35.97406769831261 38.0 36.5 38.0 32.0 38.0 28-29 35.974247208388185 38.0 36.5 38.0 32.0 38.0 30-31 35.99300831269734 38.0 37.0 38.0 32.0 38.0 32-33 35.850974417512816 38.0 36.0 38.0 31.0 38.0 34-35 35.87498273941581 38.0 36.0 38.0 31.5 38.0 36-37 35.87741763249225 38.0 36.0 38.0 31.5 38.0 38-39 35.6915924845115 38.0 36.0 38.0 31.0 38.0 40-41 35.81980870669895 38.0 36.0 38.0 31.0 38.0 42-43 35.87656611033886 38.0 36.0 38.0 31.5 38.0 44-45 35.84343039151608 38.0 36.0 38.0 31.0 38.0 46-47 35.853782139207766 38.0 36.0 38.0 31.0 38.0 48-49 35.838095720295684 38.0 36.0 38.0 31.0 38.0 50-51 35.69822975448545 38.0 36.0 38.0 31.0 38.0 52-53 35.72796398751714 38.0 36.0 38.0 31.0 38.0 54-55 35.762236603485256 38.0 36.0 38.0 31.0 38.0 56-57 35.706814018356056 38.0 36.0 38.0 31.0 38.0 58-59 35.690957295013305 38.0 36.0 38.0 31.0 38.0 60-61 35.66699500133482 38.0 36.0 38.0 31.0 38.0 62-63 35.63878430253432 38.0 36.0 38.0 31.0 38.0 64-65 35.59004961842602 38.0 36.0 38.0 31.0 38.0 66-67 35.538985906157656 38.0 36.0 38.0 31.0 38.0 68-69 35.41239908311776 38.0 36.0 38.0 31.0 38.0 70-71 35.17708438814681 38.0 36.0 38.0 28.0 38.0 72-73 34.994398365077465 38.0 36.0 38.0 27.0 38.0 74-75 34.97829769214482 38.0 36.0 38.0 27.0 38.0 76 34.020316858297505 37.0 34.0 38.0 24.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 0.0 21 2.0 22 10.0 23 41.0 24 99.0 25 194.0 26 357.0 27 597.0 28 1075.0 29 1563.0 30 2387.0 31 3546.0 32 5075.0 33 6886.0 34 9469.0 35 12958.0 36 19031.0 37 45338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.793627852599215 18.86236640307837 10.372920674957884 28.971085069364534 2 21.274245367259205 19.144059137062847 34.56167321801728 25.020022277660665 3 20.02964217658268 21.479531248561617 29.638494324719915 28.85233225013578 4 14.4243249960876 18.518075283764006 34.81943127525799 32.238168444890405 5 14.414198786696003 33.77735227241344 36.38899373095582 15.419455209934732 6 31.048799123622604 38.20526747001261 16.128289867346655 14.617643539018127 7 29.030001196733835 27.61785526885086 20.93179537692513 22.42034815749017 8 25.62575371217631 36.3926759889164 18.12775593994237 19.853814358964918 9 23.892330777232598 15.312669729077871 20.102366771304165 40.69263272238537 10-11 25.790995038157398 25.205055740179876 26.532509734969484 22.47143948669324 12-13 25.087223485441275 21.89746752708761 26.642517191541852 26.372791795929263 14-15 22.767861252520046 22.6086035957249 22.71723020556205 31.906304946193004 16-17 25.430133758020418 27.197157296854428 23.418700347052813 23.95400859807234 18-19 24.952821069880052 25.455449281499416 24.445590035809957 25.146139612810575 20-21 23.461966878089644 24.974454335398466 24.282189838809156 27.281388947702734 22-23 23.551261633633743 26.61443997459242 24.65363761058281 25.180660781191026 24-25 25.146139612810575 26.300987765697926 24.552835798911893 24.000036822579606 26-27 24.655939021808173 27.085768993546843 24.894825507000892 23.36346647764409 28-29 23.192241482477055 25.17789908772059 27.0645960102735 24.565263419528854 30-31 23.382798331937142 26.530668605989195 25.020482559905734 25.06605050216793 32-33 22.706643713925377 27.16079499949369 24.640749707720776 25.49181157886016 34-35 23.362545913153944 24.85984405637537 26.644818602767216 25.132791427703467 36-37 23.424684016238757 26.096162166640585 24.86536744331624 25.613786373804416 38-39 22.590652588167064 25.40113597658084 27.001537342698544 25.006674092553556 40-41 22.936324554216643 24.250890646144217 27.62153752681144 25.1912472728277 42-43 24.506807574404625 24.01982895911773 27.28276979443795 24.190593672039697 44-45 22.20815804251167 25.90974785738615 27.949258485303186 23.932835614798993 46-47 24.05388984525311 23.89417190621289 26.496607719853817 25.555330528680187 48-49 23.40074933949498 23.6598882434709 26.941240368594023 25.998122048440102 50-51 21.663644146590688 23.87345920518462 28.51448508225244 25.948411565972258 52-53 21.06389638126099 23.97840355706119 30.62303804693038 24.334662014747444 54-55 20.263005274834526 24.32545636984599 29.185576595568403 26.225961759751083 56-57 21.89746752708761 24.204862421636946 27.319592374043765 26.578077677231676 58-59 20.52076333207523 24.120170488543575 29.884285043588726 25.47478113579247 60-61 21.791602610720894 25.81677084388147 26.868515773872538 25.523110771525097 62-63 19.563376262324056 27.821300021172984 26.4800375590312 26.13528615747176 64-65 20.04667261965037 28.206095978053742 25.699398871387935 26.047832530907954 66-67 20.250117371972493 28.07859779616861 25.074335582579238 26.596949249279657 68-69 19.826197424260556 28.481344760607204 24.891603531285384 26.800854283846853 70-71 20.27543289545149 27.620156680076224 24.89942832945162 27.204982095020668 72-73 20.228023824209004 26.155538576254962 25.104714210754036 28.511723388782002 74-75 20.345856078947612 26.087416803984205 24.915998490274234 28.65072862679395 76 20.639055869058907 26.343794014489685 24.61957672444743 28.397573392003977 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 5.5 15 17.0 16 28.0 17 31.0 18 49.0 19 68.0 20 105.5 21 142.0 22 172.5 23 263.5 24 374.0 25 424.0 26 485.0 27 590.0 28 778.5 29 923.0 30 1015.0 31 1234.5 32 1629.0 33 1896.0 34 2060.0 35 2411.5 36 2875.0 37 3151.0 38 3483.5 39 4247.0 40 5195.0 41 6160.5 42 6609.0 43 6835.0 44 7065.0 45 6671.5 46 6274.0 47 6125.0 48 5550.5 49 4890.0 50 4655.0 51 4335.0 52 3605.0 53 2944.5 54 2694.0 55 2521.0 56 2145.0 57 1811.0 58 1680.0 59 1527.0 60 1351.0 61 1333.0 62 1338.0 63 1299.0 64 1284.0 65 1332.5 66 1367.0 67 1377.0 68 1342.5 69 1294.5 70 1235.5 71 1190.0 72 1214.5 73 1206.0 74 1109.5 75 1046.0 76 950.5 77 799.5 78 676.0 79 608.0 80 527.0 81 373.5 82 261.5 83 222.0 84 174.0 85 102.5 86 62.0 87 45.0 88 31.5 89 13.5 90 8.0 91 5.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 108629.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.18798847453259 #Duplication Level Percentage of deduplicated Percentage of total 1 65.02652639151155 33.28577083467582 2 19.06663069867818 19.519649449042152 3 6.970596169409225 10.704323891410212 4 2.8594550849743725 5.854790157324471 5 1.5987770883913317 4.0919091586961125 6 1.084434852980847 3.330602325345902 7 0.7391421634745077 2.6484640381481928 8 0.5431166262026796 2.2240838081911827 9 0.3542846866289003 1.6321608410277182 >10 1.7444474417768185 13.388689944674073 >50 0.005395198273536552 0.20896813926299607 >100 0.005395198273536552 0.5643060324591039 >500 0.0 0.0 >1k 0.001798399424512184 2.546281379742058 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTACACCTCATCTCGTATGCCGT 2766 2.546281379742058 No Hit TCTTATACACATCTCCGAGCCCACGAGACTACACCTCATCTCGTATGCCG 288 0.2651225731618629 No Hit CTCTTATACACATCTCCGAGCCCACGAGACTACACCTCATCTCGTATGCC 194 0.1785895110881993 No Hit CTTATACACATCTCCGAGCCCACGAGACTACACCTCACCTCGTATGCCGT 131 0.12059394820904178 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.205644901453572E-4 0.0 5 0.0 0.0 0.0 9.205644901453572E-4 0.0 6 0.0 0.0 0.0 9.205644901453572E-4 0.0 7 0.0 0.0 0.0 9.205644901453572E-4 0.0 8 0.0 0.0 0.0 9.205644901453572E-4 0.0 9 0.0 0.0 0.0 9.205644901453572E-4 0.0 10 0.0 0.0 0.0 9.205644901453572E-4 0.0 11 0.0 0.0 0.0 9.205644901453572E-4 0.0 12 0.0 0.0 0.0 0.0018411289802907143 0.0 13 0.0 0.0 0.0 0.0018411289802907143 0.0 14 0.0 0.0 0.0 0.0018411289802907143 0.0 15 0.0 0.0 0.0 0.0018411289802907143 0.0 16 0.0 0.0 0.0 0.0018411289802907143 0.0 17 0.0 0.0 0.0 0.0027616934704360716 0.0 18 0.0 0.0 0.0 0.0027616934704360716 0.0 19 0.0 0.0 0.0 0.0027616934704360716 0.0 20 0.0 0.0 0.0 0.0036822579605814286 0.0 21 0.0 0.0 0.0 0.0036822579605814286 0.0 22 0.0 0.0 0.0 0.004602822450726786 0.0 23 0.0 0.0 0.0 0.005523386940872143 0.0 24 0.0 0.0 0.0 0.0064439514310175 0.0 25 0.0 0.0 0.0 0.007364515921162857 0.0 26 0.0 0.0 0.0 0.009205644901453572 0.0 27 0.0 0.0 0.0 0.026696370214215358 0.0 28 0.0 0.0 0.0 0.04142540205654107 0.0 29 0.0 0.0 0.0 0.06351894982002965 0.0 30 0.0 9.205644901453572E-4 0.0 0.07732741717221 0.0 31 0.0 9.205644901453572E-4 0.0 0.11414999677802429 0.0 32 0.0 9.205644901453572E-4 0.0 0.14636975393311177 0.0 33 0.0 9.205644901453572E-4 0.0 0.20252418783197856 0.0 34 0.0 9.205644901453572E-4 0.0 0.2945806368465143 0.0 35 0.0 9.205644901453572E-4 0.0 0.42806248791759105 0.0 36 0.0 9.205644901453572E-4 0.0 0.6563624814736396 0.0 37 0.0 9.205644901453572E-4 0.0 0.9951302138471311 0.0 38 0.0 9.205644901453572E-4 0.0 1.3974168960406521 0.0 39 0.0 9.205644901453572E-4 0.0 1.811670916606063 0.0 40 0.0 9.205644901453572E-4 0.0 2.2388128400335083 0.0 41 0.0 9.205644901453572E-4 0.0 2.7469644385937455 0.0 42 0.0 9.205644901453572E-4 0.0 3.2956208747203783 0.0 43 0.0 9.205644901453572E-4 0.0 4.024707950915501 0.0 44 0.0 9.205644901453572E-4 0.0 4.791538171206584 0.0 45 0.0 9.205644901453572E-4 0.0 5.637536937650167 0.0 46 0.0 9.205644901453572E-4 0.0 6.53508731554189 0.0 47 0.0 9.205644901453572E-4 0.0 7.428034870982887 0.0 48 0.0 9.205644901453572E-4 0.0 8.252860654153126 0.0 49 0.0 9.205644901453572E-4 0.0 9.099779985086855 0.0 50 0.0 9.205644901453572E-4 0.0 9.893306575592153 0.0 51 0.0 9.205644901453572E-4 0.0 10.732861390604718 0.0 52 0.0 9.205644901453572E-4 0.0 11.51810290069871 0.0 53 0.0 9.205644901453572E-4 0.0 12.314391184674442 0.0 54 0.0 9.205644901453572E-4 0.0 13.192609708273112 0.0 55 0.0 9.205644901453572E-4 0.0 14.06162258697033 0.0 56 0.0 9.205644901453572E-4 0.0 14.873560467278535 0.0 57 0.0 9.205644901453572E-4 0.0 15.727844314133426 0.0 58 0.0 9.205644901453572E-4 0.0 16.517688646678142 0.0 59 0.0 9.205644901453572E-4 0.0 17.24401402940283 0.0 60 0.0 9.205644901453572E-4 0.0 17.968498283147227 0.0 61 0.0 9.205644901453572E-4 0.0 18.668127295657698 0.0 62 0.0 9.205644901453572E-4 0.0 19.39537324287253 0.0 63 0.0 9.205644901453572E-4 0.0 20.147474431321285 0.0 64 0.0 9.205644901453572E-4 0.0 20.8885288458883 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTCTTA 15 0.0022194686 70.0 1 TATGCGT 15 0.0022194686 70.0 67 ATCGTAT 30 1.01557816E-7 70.0 39 ATATCGT 25 2.8236973E-6 70.0 37 CCGTCTT 385 0.0 58.181824 47 TCGTATG 440 0.0 58.068184 40 TCTCGTA 370 0.0 57.7027 38 CGTATGC 440 0.0 57.27273 41 TATGCCG 440 0.0 57.27273 43 CTCGTAT 410 0.0 57.19512 39 GCCGTCT 410 0.0 57.19512 46 ATCTCGT 390 0.0 55.641026 37 ATGCCGT 435 0.0 55.51724 44 CTTGAAA 410 0.0 55.487804 57 CATCTCG 385 0.0 55.45455 36 GTATGCC 455 0.0 55.384617 42 TGCCGTC 440 0.0 54.886368 45 CGTCTTC 410 0.0 54.634148 48 TCATCTC 390 0.0 53.846153 35 TCTTCTG 425 0.0 52.705883 50 >>END_MODULE