##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781126_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 554459 Sequences flagged as poor quality 0 Sequence length 76 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.33853179405511 34.0 34.0 34.0 33.0 34.0 2 33.35392157039565 34.0 34.0 34.0 33.0 34.0 3 33.40204595831252 34.0 34.0 34.0 34.0 34.0 4 33.45812224168063 34.0 34.0 34.0 34.0 34.0 5 33.44395347536968 34.0 34.0 34.0 34.0 34.0 6 36.90321737044579 38.0 37.0 38.0 35.0 38.0 7 36.825047478713486 38.0 37.0 38.0 34.0 38.0 8 36.62312813030359 38.0 37.0 38.0 34.0 38.0 9 36.58454096696059 38.0 37.0 38.0 34.0 38.0 10-11 36.50642878914401 38.0 37.0 38.0 34.0 38.0 12-13 36.45473876337114 38.0 37.0 38.0 34.0 38.0 14-15 36.46451946852697 38.0 37.0 38.0 34.0 38.0 16-17 36.41679006022086 38.0 37.0 38.0 34.0 38.0 18-19 36.426414757448256 38.0 37.0 38.0 34.0 38.0 20-21 36.37220064964227 38.0 37.0 38.0 34.0 38.0 22-23 36.40406594536296 38.0 37.0 38.0 34.0 38.0 24-25 36.4060994591124 38.0 37.0 38.0 34.0 38.0 26-27 36.219248853386816 38.0 37.0 38.0 34.0 38.0 28-29 36.200109476083895 38.0 37.0 38.0 34.0 38.0 30-31 36.23570453360844 38.0 37.0 38.0 34.0 38.0 32-33 36.18250853534707 38.0 37.0 38.0 34.0 38.0 34-35 36.19145779940446 38.0 37.0 38.0 34.0 38.0 36-37 36.156039490746835 38.0 37.0 38.0 34.0 38.0 38-39 36.15773393524138 38.0 37.0 38.0 34.0 38.0 40-41 36.1415289498412 38.0 37.0 38.0 34.0 38.0 42-43 36.13105297235684 38.0 37.0 38.0 34.0 38.0 44-45 36.104528017400746 38.0 37.0 38.0 33.5 38.0 46-47 36.114154518188 38.0 37.0 38.0 33.5 38.0 48-49 36.099460014175975 38.0 37.0 38.0 33.5 38.0 50-51 36.02195653781433 38.0 37.0 38.0 32.0 38.0 52-53 36.049890974806075 38.0 37.0 38.0 32.5 38.0 54-55 36.05726482932012 38.0 37.0 38.0 32.5 38.0 56-57 35.99924791553568 38.0 37.0 38.0 32.0 38.0 58-59 36.00840008007806 38.0 37.0 38.0 32.0 38.0 60-61 36.00881940774701 38.0 37.0 38.0 32.0 38.0 62-63 35.98020142156589 38.0 37.0 38.0 32.0 38.0 64-65 35.93990087634974 38.0 37.0 38.0 32.0 38.0 66-67 35.9274905809086 38.0 37.0 38.0 32.0 38.0 68-69 35.89003064248213 38.0 37.0 38.0 32.0 38.0 70-71 35.870309617122274 38.0 37.0 38.0 31.5 38.0 72-73 35.8421650654061 38.0 37.0 38.0 31.5 38.0 74-75 35.84320481766912 38.0 37.0 38.0 31.5 38.0 76 35.07983998816865 38.0 35.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 1.0 20 4.0 21 19.0 22 56.0 23 135.0 24 310.0 25 644.0 26 1217.0 27 2169.0 28 3699.0 29 6124.0 30 9815.0 31 14725.0 32 21555.0 33 30385.0 34 42181.0 35 59613.0 36 94592.0 37 267214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.863699570211686 18.55448283822609 9.688362890673611 24.893454700888615 2 23.028213086991105 22.319053347497288 31.023574331014558 23.62915923449705 3 20.27868607056608 22.73387211678411 30.341648345504357 26.645793467145452 4 14.347679449697814 17.669115299778703 36.56753700453956 31.415668245983923 5 14.368961456122092 33.22229416422134 35.63653940147062 16.772204978185943 6 30.054701970749864 37.21393286068041 18.702915815236114 14.028449353333611 7 27.636308545807715 31.132148634975714 21.898463186637784 19.333079632578784 8 24.699752371230336 35.98534787964484 20.575552024586127 18.739347724538693 9 24.38773651433199 17.368461870039084 21.930386196274206 36.31341541935472 10-11 24.079147421179925 25.651581090756935 28.13400089095857 22.135270597104565 12-13 24.813917710777535 23.73196214688552 27.707188448559766 23.746931693777178 14-15 22.557664317830532 24.713459426215465 25.10744707904462 27.621429176909384 16-17 22.63539774807515 28.737652378264215 25.64977753089047 22.97717234277016 18-19 21.995314351466924 28.01830252552488 27.472635487926066 22.513747635082126 20-21 22.467937214473928 27.72747849705749 27.068277365864745 22.736306922603834 22-23 22.18522920540563 27.5675027369021 27.41086356249966 22.83640449519261 24-25 22.731617666951028 27.569667008741856 27.00289832070541 22.69581700360171 26-27 21.954103008518214 27.766705924153097 27.493286248397087 22.785904818931606 28-29 21.70908940065902 27.451443659495112 28.04625770345508 22.793209236390787 30-31 22.278383072508518 27.66471461370453 27.5508198081373 22.50608250564965 32-33 21.990534917820796 27.791414694323656 27.57354466245475 22.644505725400794 34-35 21.943191471326102 27.342418465567338 27.974836732743086 22.73955333036347 36-37 22.41175632463356 27.920098690795893 27.318611475330005 22.349533509240537 38-39 21.799808461942185 27.755614030974336 28.08314050272428 22.361437004359207 40-41 21.818024416593474 27.21157019725534 28.336540663962527 22.633864722188658 42-43 22.20055946427058 27.14114118446991 28.15988197504234 22.498417376217176 44-45 21.78042019337769 27.177573093772487 28.33545852804265 22.706548184807176 46-47 21.870237474727617 27.18884534293789 28.170252444274507 22.770664738059985 48-49 21.45352496758101 27.144387592229542 28.646302071027797 22.75578536916165 50-51 21.54613776672396 27.047626605393727 28.581644449815048 22.82459117806727 52-53 21.227358560326373 26.95429238230419 29.046512005396252 22.771837051973183 54-55 21.140968042722726 27.02192587729661 28.782200306965887 23.054905773014777 56-57 21.253780712370077 26.91425335326868 28.538178657033253 23.29378727732799 58-59 20.790987250635304 26.551918176095977 29.36980011146 23.28729446180872 60-61 21.247648608824097 27.307880294124544 28.114973334367377 23.329497762683985 62-63 20.594579581177328 27.496171944183427 28.311290825832025 23.597957648807217 64-65 20.663926458042887 27.24511641077158 28.121375971893325 23.96958115929221 66-67 20.62731419275366 27.37749770497007 27.80936011499498 24.185827987281296 68-69 20.895774078876887 27.461092704780697 27.755974742947632 23.887158473394788 70-71 21.13627878706992 27.166841912567026 27.314282931650492 24.382596368712566 72-73 20.68448704052058 26.863122431054414 27.656418238318793 24.79597229010621 74-75 20.795856862274757 26.833634227237724 27.22969597391331 25.140812936574207 76 20.912817719614978 26.817853078406156 26.956186120163977 25.313143081814886 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.5 2 0.5 3 0.5 4 1.0 5 0.5 6 0.0 7 0.0 8 0.0 9 0.5 10 2.0 11 6.0 12 9.0 13 15.5 14 49.5 15 143.0 16 299.0 17 389.0 18 525.0 19 943.5 20 1434.5 21 1643.0 22 2076.5 23 2846.0 24 3843.0 25 4504.0 26 5159.0 27 6433.0 28 7863.0 29 8674.0 30 9580.0 31 11426.0 32 13411.0 33 14456.0 34 15522.5 35 17592.0 36 20024.0 37 21453.0 38 22281.5 39 24183.5 40 25879.0 41 26629.5 42 26758.0 43 27156.5 44 27783.0 45 27590.5 46 27170.0 47 26635.5 48 25154.0 49 23336.0 50 22465.0 51 21402.0 52 19447.0 53 18391.0 54 18227.0 55 17691.5 56 16380.0 57 14680.5 58 13757.0 59 12702.0 60 10717.0 61 8787.0 62 7787.0 63 7077.0 64 5674.5 65 4591.5 66 3824.5 67 3448.0 68 3194.0 69 2606.0 70 2108.5 71 1945.0 72 1836.0 73 1538.0 74 1197.5 75 1046.0 76 978.0 77 847.5 78 714.5 79 644.0 80 618.0 81 500.0 82 364.0 83 320.0 84 271.0 85 202.0 86 134.0 87 86.0 88 70.0 89 43.0 90 22.5 91 10.5 92 8.0 93 5.5 94 2.5 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 554459.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.286531428083514 #Duplication Level Percentage of deduplicated Percentage of total 1 65.66803210433933 40.245659133829896 2 22.36507272167293 27.41355464496363 3 7.4740841165280045 13.741820733112 4 2.322397038146133 5.693266362673242 5 0.7790840218987425 2.3873678696607494 6 0.32431634113287394 1.1925734180088559 7 0.19885438133915107 0.8530966704087791 8 0.138700067949863 0.6800356858789278 9 0.10975075970403372 0.6053619045471574 >10 0.6076225959498218 6.31576758300022 >50 0.01031719267627443 0.3918483192537397 >100 0.0014738822190448295 0.12989328741377068 >500 0.0 0.0 >1k 2.9477644380731063E-4 0.34975438724900926 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCCTCGCAGATCTCGTATGCCGT 1936 0.34916919014751313 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.607119732928855E-4 0.0 2 0.0 0.0 0.0 3.607119732928855E-4 0.0 3 0.0 0.0 0.0 3.607119732928855E-4 0.0 4 0.0 0.0 0.0 3.607119732928855E-4 0.0 5 0.0 0.0 0.0 3.607119732928855E-4 0.0 6 0.0 0.0 0.0 3.607119732928855E-4 0.0 7 0.0 0.0 0.0 3.607119732928855E-4 0.0 8 0.0 0.0 0.0 3.607119732928855E-4 0.0 9 0.0 0.0 0.0 5.410679599393282E-4 0.0 10 0.0 0.0 0.0 5.410679599393282E-4 0.0 11 0.0 0.0 0.0 5.410679599393282E-4 0.0 12 0.0 0.0 0.0 5.410679599393282E-4 0.0 13 0.0 0.0 0.0 0.0010821359198786564 0.0 14 0.0 0.0 0.0 0.0010821359198786564 0.0 15 0.0 0.0 0.0 0.0010821359198786564 0.0 16 0.0 0.0 0.0 0.001442847893171542 0.0 17 0.0 0.0 0.0 0.001442847893171542 0.0 18 0.0 1.8035598664644276E-4 0.0 0.0019839158531108703 0.0 19 0.0 1.8035598664644276E-4 0.0 0.002164271839757313 0.0 20 0.0 1.8035598664644276E-4 0.0 0.0025249838130501985 0.0 21 0.0 1.8035598664644276E-4 0.0 0.002885695786343084 0.0 22 0.0 1.8035598664644276E-4 0.0 0.002885695786343084 0.0 23 0.0 1.8035598664644276E-4 0.0 0.0032464077596359693 0.0 24 0.0 1.8035598664644276E-4 0.0 0.004328543679514626 0.0 25 0.0 1.8035598664644276E-4 0.0 0.004689255652807512 0.0 26 0.0 1.8035598664644276E-4 0.0 0.0048696116394539544 0.0 27 0.0 1.8035598664644276E-4 0.0 0.006312459532625496 0.0 28 0.0 1.8035598664644276E-4 0.0 0.01316598702519032 0.0 29 0.0 1.8035598664644276E-4 0.0 0.022724854317451786 0.0 30 0.0 1.8035598664644276E-4 0.0 0.030660517729895267 0.0 31 0.0 1.8035598664644276E-4 0.0 0.04166223291532827 0.0 32 0.0 1.8035598664644276E-4 0.0 0.05464786395387215 0.0 33 0.0 1.8035598664644276E-4 0.0 0.07196203867193066 0.0 34 0.0 1.8035598664644276E-4 0.0 0.10027792857542217 0.0 35 0.0 1.8035598664644276E-4 0.0 0.14031695761093246 0.0 36 0.0 1.8035598664644276E-4 0.0 0.20308084096389453 0.0 37 0.0 1.8035598664644276E-4 0.0 0.3183283164309714 0.0 38 0.0 1.8035598664644276E-4 0.0 0.4737951769202051 0.0 39 0.0 1.8035598664644276E-4 0.0 0.6512654677803048 0.0 40 0.0 1.8035598664644276E-4 0.0 0.8642658880097537 0.0 41 0.0 1.8035598664644276E-4 0.0 1.0826769878385958 0.0 42 0.0 1.8035598664644276E-4 0.0 1.324714721918122 0.0 43 0.0 1.8035598664644276E-4 0.0 1.5777541711830811 0.0 44 0.0 1.8035598664644276E-4 0.0 1.8796700928292263 0.0 45 0.0 1.8035598664644276E-4 0.0 2.214771516018317 0.0 46 0.0 1.8035598664644276E-4 0.0 2.5787298970708386 0.0 47 0.0 1.8035598664644276E-4 1.8035598664644276E-4 2.9538703492954395 0.0 48 0.0 1.8035598664644276E-4 1.8035598664644276E-4 3.3445214163716344 0.0 49 0.0 1.8035598664644276E-4 1.8035598664644276E-4 3.7385992471941116 0.0 50 0.0 1.8035598664644276E-4 1.8035598664644276E-4 4.133398501963175 0.0 51 0.0 1.8035598664644276E-4 1.8035598664644276E-4 4.528017400745592 0.0 52 0.0 1.8035598664644276E-4 1.8035598664644276E-4 4.882597270492498 0.0 53 0.0 1.8035598664644276E-4 1.8035598664644276E-4 5.258459146663685 0.0 54 0.0 1.8035598664644276E-4 1.8035598664644276E-4 5.6216961037696205 0.0 55 0.0 1.8035598664644276E-4 1.8035598664644276E-4 6.00098474368709 0.0 56 0.0 1.8035598664644276E-4 1.8035598664644276E-4 6.399932186149021 0.0 57 0.0 1.8035598664644276E-4 1.8035598664644276E-4 6.804831376170285 0.0 58 0.0 1.8035598664644276E-4 1.8035598664644276E-4 7.2131573299378315 0.0 59 0.0 1.8035598664644276E-4 1.8035598664644276E-4 7.606874448787016 0.0 60 0.0 1.8035598664644276E-4 1.8035598664644276E-4 8.023496777940299 0.0 61 0.0 1.8035598664644276E-4 1.8035598664644276E-4 8.392865838592213 0.0 62 0.0 1.8035598664644276E-4 1.8035598664644276E-4 8.773056258442915 0.0 63 0.0 1.8035598664644276E-4 1.8035598664644276E-4 9.133587875749154 0.0 64 0.0 1.8035598664644276E-4 1.8035598664644276E-4 9.498628392721553 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGTCT 320 0.0 53.59375 46 CGAGCAA 20 0.0069501493 52.5 37 TATGCCG 325 0.0 51.69231 43 CGTATGC 335 0.0 50.149254 41 TCGTATG 350 0.0 48.0 40 CTCGTAT 330 0.0 47.727272 39 CCGTCTT 365 0.0 46.9863 47 ATGCCGT 365 0.0 46.9863 44 TCTCGTA 285 0.0 46.666664 38 CGTCTTC 365 0.0 46.027397 48 TGCCGTC 385 0.0 45.454544 45 ATCTCGT 300 0.0 44.333336 37 GTATGCC 395 0.0 42.531647 42 TCGCAGA 390 0.0 42.17949 31 CGCAGAT 335 0.0 40.74627 32 CTCGCAG 425 0.0 40.35294 30 AGTACCG 65 4.8640504E-7 37.692307 5 CCTCGCA 460 0.0 36.521736 29 TACCGCA 75 1.4899906E-6 32.666668 7 CAGATCT 435 0.0 31.37931 34 >>END_MODULE