SRR1781125_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781125_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	172866
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGCAAG	25	2.3853389E-4	55.999996	11
CTCAACG	40	7.44707E-7	52.500004	46
CGCAAGG	20	0.006942097	52.500004	12
CAACGGC	45	1.677432E-6	46.666664	48
GCACGAC	30	5.865475E-4	46.666664	11
AGCCTTA	45	1.677432E-6	46.666664	6
TCAACGG	45	1.677432E-6	46.666664	47
ACGGCTA	50	3.4636942E-6	42.0	50
ACTCAAG	50	3.4636942E-6	42.0	11
CCGGACG	35	0.0012528116	40.0	45
CGGACGT	35	0.0012528116	40.0	46
GGAATCT	55	6.666254E-6	38.181816	34
ATTACAT	55	6.666254E-6	38.181816	25
AACGGCT	55	6.666254E-6	38.181816	49
CGGCTAC	55	6.666254E-6	38.181816	51
ATTCCCG	40	0.0024137697	35.000004	41
GATATAG	40	0.0024137697	35.000004	2
CTCGCAA	40	0.0024137697	35.000004	26
GAATCTT	60	1.2105878E-5	35.0	35
ATCCGCT	50	1.7044898E-4	35.0	49