##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781125_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 172866 Sequences flagged as poor quality 0 Sequence length 76 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09378362431016 34.0 32.0 34.0 21.0 34.0 2 31.16676500873509 34.0 32.0 34.0 23.0 34.0 3 31.178959425219535 34.0 32.0 34.0 23.0 34.0 4 31.310309719667256 34.0 33.0 34.0 23.0 34.0 5 31.276005692270314 34.0 33.0 34.0 23.0 34.0 6 33.996789420707366 37.0 34.0 38.0 24.0 38.0 7 33.9964943945021 37.0 34.0 38.0 24.0 38.0 8 33.75612902479377 37.0 34.0 38.0 23.0 38.0 9 34.06493468929691 37.0 34.0 38.0 24.0 38.0 10-11 33.905499057073115 37.0 34.0 38.0 23.0 38.0 12-13 33.86070424490646 37.0 34.0 38.0 23.0 38.0 14-15 33.740402971087434 37.0 34.0 38.0 22.5 38.0 16-17 33.69343017134659 37.0 34.0 38.0 22.5 38.0 18-19 33.738994365577966 37.0 34.0 38.0 22.5 38.0 20-21 33.65896127636435 37.0 34.0 38.0 22.5 38.0 22-23 33.7462658938137 37.0 34.0 38.0 22.5 38.0 24-25 33.728740758737985 37.0 34.0 38.0 23.0 38.0 26-27 33.63378570684808 37.0 34.0 38.0 22.0 38.0 28-29 33.723956706350585 37.0 34.0 38.0 23.0 38.0 30-31 33.76570869922368 37.0 34.0 38.0 23.0 38.0 32-33 33.742537572454964 37.0 34.0 38.0 23.0 38.0 34-35 33.746025823470205 37.0 34.0 38.0 23.0 38.0 36-37 33.606351162171855 37.0 34.0 38.0 22.5 38.0 38-39 33.6079651290595 37.0 34.0 38.0 22.0 38.0 40-41 33.60635116217186 37.0 34.0 38.0 22.0 38.0 42-43 33.696626288570336 37.0 34.0 38.0 23.0 38.0 44-45 33.7269416773686 37.0 34.0 38.0 23.0 38.0 46-47 33.7109321671121 37.0 34.0 38.0 22.5 38.0 48-49 33.67295188180441 37.0 34.0 38.0 22.5 38.0 50-51 33.53790219013571 37.0 34.0 38.0 22.0 38.0 52-53 33.60904978422593 37.0 34.0 38.0 22.0 38.0 54-55 33.579798803697656 37.0 34.0 38.0 22.0 38.0 56-57 33.54715212939502 37.0 34.0 38.0 22.0 38.0 58-59 33.531052954311434 37.0 34.0 38.0 22.0 38.0 60-61 33.50580796686451 37.0 34.0 38.0 22.0 38.0 62-63 33.45846493816019 37.0 34.0 38.0 22.0 38.0 64-65 33.478839100806404 37.0 34.0 38.0 22.0 38.0 66-67 33.37767403653697 37.0 34.0 38.0 21.5 38.0 68-69 33.131561440653456 37.0 33.5 38.0 21.0 38.0 70-71 33.26713176680203 37.0 33.5 38.0 21.0 38.0 72-73 33.23022167459188 37.0 33.0 38.0 21.0 38.0 74-75 33.172034986637044 37.0 32.5 38.0 21.0 38.0 76 31.681412192102552 36.0 28.0 38.0 11.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 30.0 14 95.0 15 271.0 16 577.0 17 1048.0 18 1406.0 19 1639.0 20 1581.0 21 1618.0 22 1758.0 23 1991.0 24 2296.0 25 2792.0 26 3349.0 27 3844.0 28 4502.0 29 5427.0 30 6489.0 31 7357.0 32 8981.0 33 10606.0 34 13181.0 35 17123.0 36 25261.0 37 49640.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 45.228674233221106 18.384181967535547 9.974199669107865 26.41294413013548 2 23.772748834357248 19.612300857311443 30.56008700380642 26.054863304524893 3 20.053683199703816 20.823065264424468 28.36069556766513 30.76255596820659 4 14.569088195480893 15.886293429592863 35.50495759721402 34.039660777712214 5 14.39901426538475 32.917404232179834 35.007462427545036 17.67611907489038 6 31.00146934619879 35.07630187544109 18.06890886582671 15.853319912533406 7 30.3188596947925 27.824442053382388 21.65955132877489 20.197146923050223 8 26.74672868001805 32.795922853539736 19.2709960316083 21.186352434833918 9 24.999710758622285 16.247266668980597 20.93760484999942 37.81541772239769 10-11 26.0988279939375 23.69320745548575 26.455751854037228 23.752212696539516 12-13 25.99499033933799 22.334351462982887 25.905036270868763 25.76562192681036 14-15 23.850265523584742 23.400205939860932 23.304756285215138 29.444772251339185 16-17 24.076452280957504 26.028831580530586 24.776416415026667 25.118299723485244 18-19 23.65531683500515 25.753763030324066 25.827519581641273 24.763400553029513 20-21 23.779401386044682 26.067011442388903 25.655710203278844 24.497876968287574 22-23 24.043189522520333 25.20883227470989 26.151759166059257 24.596219036710515 24-25 23.557553249337637 25.531336410861595 26.075688683720337 24.835421656080435 26-27 22.894612011615934 25.794546064581812 26.2859671653188 25.02487475848345 28-29 23.411775594969512 25.885657098561893 26.647229646084252 24.055337660384343 30-31 23.57953559404394 25.598440410491364 26.20469033818102 24.617333657283677 32-33 23.226082630476785 25.915159719088777 25.86743489176588 24.991322758668563 34-35 23.870801661402474 25.34304027396943 26.270348130922216 24.515809933705874 36-37 23.928939178323095 25.23573172283734 26.070193097543765 24.7651360012958 38-39 23.281038492242544 25.622736686219383 26.755984404104915 24.340240417433158 40-41 23.515324008191314 24.723485242904907 27.26475998750477 24.496430761399 42-43 22.94667545960455 25.05871599967605 26.977254058056527 25.017354482662874 44-45 22.578471185773953 24.845834345678156 27.231786470445318 25.343907998102576 46-47 22.860770770423333 24.587252554001367 27.59912302014277 24.95285365543253 48-49 22.138535050270153 24.787986070135247 28.02835722467113 25.04512165492347 50-51 22.183078222438187 24.762532828896372 27.64308770955538 25.411301239110063 52-53 21.940983189291128 24.662455312207143 28.176448810060972 25.22011268844076 54-55 21.309569261740307 24.96037393125311 28.038191431513425 25.691865375493155 56-57 21.181146090035057 25.113961102819527 28.02112619022827 25.683766616917147 58-59 21.512327467518194 24.997686068978282 27.667962468038827 25.822023995464694 60-61 21.275728020547707 24.60229310564252 27.992780535212248 26.129198338597526 62-63 20.91273009151597 24.61559820901739 28.120335982784354 26.351335716682282 64-65 21.825286638205316 24.684148415535734 27.341119711221406 26.149445235037543 66-67 21.717978087073224 24.428748279013803 26.87428412759016 26.978989506322815 68-69 21.575671329237675 24.337058762278296 26.82771626577812 27.259553642705907 70-71 22.071141809262667 24.30987007277313 26.882093644788448 26.736894473175752 72-73 22.01069036132033 23.893362488864206 26.475420267721816 27.620526882093642 74-75 22.152129395022733 23.921997385257946 26.421332130089205 27.50454108963012 76 22.599585806347115 23.34640704360603 26.0311455115523 28.022861638494557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.5 15 6.5 16 16.5 17 21.0 18 41.0 19 46.5 20 48.5 21 65.0 22 100.5 23 184.5 24 324.5 25 416.0 26 529.5 27 653.0 28 803.5 29 944.0 30 1117.0 31 1473.0 32 2126.0 33 2596.0 34 2859.0 35 3541.0 36 4484.0 37 5008.0 38 5653.0 39 6990.0 40 8431.0 41 9502.5 42 9825.0 43 10139.5 44 10433.5 45 10551.5 46 10690.0 47 10549.0 48 9833.5 49 8959.0 50 8659.0 51 8008.5 52 6666.0 53 5581.5 54 5189.0 55 4845.0 56 4162.5 57 3422.5 58 3021.0 59 2792.0 60 2419.0 61 2223.5 62 2172.0 63 2092.5 64 2048.0 65 2032.0 66 1893.0 67 1805.0 68 1803.5 69 1816.5 70 1755.0 71 1679.0 72 1620.0 73 1478.0 74 1350.5 75 1306.0 76 1205.0 77 1000.0 78 808.5 79 721.0 80 665.0 81 531.0 82 393.5 83 334.0 84 279.5 85 201.5 86 143.0 87 108.0 88 91.0 89 53.0 90 29.5 91 20.5 92 14.0 93 13.0 94 7.5 95 5.0 96 7.0 97 4.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 172866.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.54552080802472 #Duplication Level Percentage of deduplicated Percentage of total 1 73.51829044316243 39.365751506947575 2 12.747131652297918 13.651036062614974 3 5.29050798383786 8.49849016000833 4 2.3670620773103432 5.069822868580288 5 1.3342408331712798 3.57213101477445 6 0.9334284047449277 2.9988546041442503 7 0.6795445215099069 2.5470595721541542 8 0.4775177718718265 2.045515023197159 9 0.4148570687755235 1.9992364027628335 >10 2.214731747369331 19.505281547557068 >50 0.02160713899872518 0.6878159962051531 >100 0.001080356949936259 0.05900524105376419 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0011569655108581212 0.0 2 0.0 0.0 0.0 0.0011569655108581212 0.0 3 0.0 0.0 0.0 0.0011569655108581212 0.0 4 0.0 0.0 0.0 0.0028924137771453033 0.0 5 0.0 0.0 0.0 0.004627862043432485 0.0 6 0.0 0.0 0.0 0.004627862043432485 0.0 7 0.0 0.0 0.0 0.004627862043432485 0.0 8 0.0 0.0 0.0 0.004627862043432485 0.0 9 0.0 0.0 0.0 0.005784827554290607 0.0 10 0.0 0.0 0.0 0.006363310309719667 0.0 11 0.0 0.0 0.0 0.006363310309719667 0.0 12 0.0 0.0 0.0 0.006363310309719667 0.0 13 0.0 0.0 0.0 0.006363310309719667 0.0 14 0.0 0.0 0.0 0.006363310309719667 0.0 15 0.0 0.0 0.0 0.006363310309719667 0.0 16 0.0 0.0 0.0 0.007520275820577789 0.0 17 0.0 0.0 0.0 0.009834206842294031 0.0 18 0.0 0.0 0.0 0.009834206842294031 0.0 19 0.0 0.0 0.0 0.011569655108581213 0.0 20 0.0 0.0 0.0 0.011569655108581213 0.0 21 0.0 0.0 0.0 0.011569655108581213 0.0 22 0.0 0.0 0.0 0.013883586130297457 0.0 23 0.0 0.0 0.0 0.014462068885726516 0.0 24 0.0 0.0 0.0 0.01735448266287182 0.0 25 0.0 0.0 0.0 0.017932965418300882 0.0 26 0.0 0.0 0.0 0.01851144817372994 0.0 27 0.0 0.0 0.0 0.027767172260594913 0.0 28 0.0 0.0 0.0 0.04049379288003425 0.0 29 0.0 0.0 0.0 0.059583723809193245 0.0 30 0.0 0.0 0.0 0.08503696504807191 0.0 31 0.0 0.0 0.0 0.10701930975437622 0.0 32 0.0 0.0 0.0 0.13131558548239677 0.0 33 0.0 0.0 0.0 0.17007393009614383 0.0 34 0.0 0.0 0.0 0.2504830331007833 0.0 35 0.0 0.0 0.0 0.35229599805629797 0.0 36 0.0 0.0 0.0 0.514849652331864 0.0 37 0.0 0.0 0.0 0.7763238577857994 0.0 38 0.0 0.0 0.0 1.0811842698969143 0.0 39 0.0 0.0 0.0 1.4346372334640705 0.0 40 0.0 0.0 0.0 1.8361042657318385 0.0 41 0.0 0.0 0.0 2.2971550218087997 0.0 42 0.0 0.0 0.0 2.8091122603635186 0.0 43 0.0 0.0 0.0 3.450649636134347 0.0 44 0.0 0.0 0.0 4.136730184073213 0.0 45 0.0 0.0 0.0 4.890493214397279 0.0 46 0.0 0.0 0.0 5.6714449342265105 0.0 47 0.0 0.0 0.0 6.41074589566485 0.0 48 0.0 0.0 0.0 7.086992236761422 0.0 49 0.0 0.0 0.0 7.80893871553689 0.0 50 0.0 0.0 0.0 8.441798849976282 0.0 51 0.0 0.0 0.0 9.119780639339142 0.0 52 0.0 0.0 0.0 9.801811807990005 0.0 53 0.0 0.0 0.0 10.478636631842004 0.0 54 0.0 0.0 0.0 11.278678282600396 0.0 55 0.0 0.0 0.0 12.079876898869644 0.0 56 0.0 0.0 0.0 12.802980343155971 0.0 57 0.0 0.0 0.0 13.506993856513137 0.0 58 0.0 0.0 0.0 14.190181990674859 0.0 59 0.0 0.0 0.0 14.821306676847962 0.0 60 0.0 0.0 0.0 15.440283225157058 0.0 61 0.0 0.0 0.0 16.09686115256904 0.0 62 0.0 0.0 0.0 16.702532597503268 0.0 63 0.0 0.0 0.0 17.34291300776324 0.0 64 0.0 0.0 0.0 18.026679624680387 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCAAG 25 2.3853389E-4 55.999996 11 CTCAACG 40 7.44707E-7 52.500004 46 CGCAAGG 20 0.006942097 52.500004 12 CAACGGC 45 1.677432E-6 46.666664 48 GCACGAC 30 5.865475E-4 46.666664 11 AGCCTTA 45 1.677432E-6 46.666664 6 TCAACGG 45 1.677432E-6 46.666664 47 ACGGCTA 50 3.4636942E-6 42.0 50 ACTCAAG 50 3.4636942E-6 42.0 11 CCGGACG 35 0.0012528116 40.0 45 CGGACGT 35 0.0012528116 40.0 46 GGAATCT 55 6.666254E-6 38.181816 34 ATTACAT 55 6.666254E-6 38.181816 25 AACGGCT 55 6.666254E-6 38.181816 49 CGGCTAC 55 6.666254E-6 38.181816 51 ATTCCCG 40 0.0024137697 35.000004 41 GATATAG 40 0.0024137697 35.000004 2 CTCGCAA 40 0.0024137697 35.000004 26 GAATCTT 60 1.2105878E-5 35.0 35 ATCCGCT 50 1.7044898E-4 35.0 49 >>END_MODULE