##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1781124_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 232480 Sequences flagged as poor quality 0 Sequence length 76 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.282656572608396 34.0 34.0 34.0 32.0 34.0 2 33.270130763936685 34.0 34.0 34.0 33.0 34.0 3 33.31196662078458 34.0 34.0 34.0 33.0 34.0 4 33.38038540949759 34.0 34.0 34.0 33.0 34.0 5 33.36743805918789 34.0 34.0 34.0 33.0 34.0 6 36.77025550584997 38.0 37.0 38.0 34.0 38.0 7 36.6851083964212 38.0 37.0 38.0 34.0 38.0 8 36.48574931176876 38.0 37.0 38.0 34.0 38.0 9 36.444666207845835 38.0 37.0 38.0 34.0 38.0 10-11 36.346795423262215 38.0 37.0 38.0 34.0 38.0 12-13 36.28636871988988 38.0 37.0 38.0 34.0 38.0 14-15 36.28999053682037 38.0 37.0 38.0 34.0 38.0 16-17 36.22899819339298 38.0 37.0 38.0 34.0 38.0 18-19 36.23847427735719 38.0 37.0 38.0 34.0 38.0 20-21 36.18342222986924 38.0 37.0 38.0 33.5 38.0 22-23 36.22794864074329 38.0 37.0 38.0 34.0 38.0 24-25 36.234585770818995 38.0 37.0 38.0 34.0 38.0 26-27 36.0022862181693 38.0 37.0 38.0 32.0 38.0 28-29 35.98020259807295 38.0 37.0 38.0 32.0 38.0 30-31 36.008325447350316 38.0 37.0 38.0 32.0 38.0 32-33 35.98387603234687 38.0 37.0 38.0 32.0 38.0 34-35 35.975954920853404 38.0 37.0 38.0 32.0 38.0 36-37 35.935274002064695 38.0 37.0 38.0 32.0 38.0 38-39 35.87083189951824 38.0 36.5 38.0 31.5 38.0 40-41 35.90214642119752 38.0 37.0 38.0 32.0 38.0 42-43 35.916386355815554 38.0 36.5 38.0 32.0 38.0 44-45 35.89221223331039 38.0 36.0 38.0 32.0 38.0 46-47 35.893928509979354 38.0 36.5 38.0 31.5 38.0 48-49 35.87600653819683 38.0 36.0 38.0 31.5 38.0 50-51 35.79104654163799 38.0 36.0 38.0 31.0 38.0 52-53 35.81117300412939 38.0 36.0 38.0 31.0 38.0 54-55 35.83425240880936 38.0 36.0 38.0 31.0 38.0 56-57 35.78209738472127 38.0 36.0 38.0 31.0 38.0 58-59 35.77419778045423 38.0 36.0 38.0 31.0 38.0 60-61 35.764448554714384 38.0 36.0 38.0 31.0 38.0 62-63 35.7423434273916 38.0 36.0 38.0 31.0 38.0 64-65 35.70037852718514 38.0 36.0 38.0 31.0 38.0 66-67 35.679406830695115 38.0 36.0 38.0 31.0 38.0 68-69 35.616425068823126 38.0 36.0 38.0 31.0 38.0 70-71 35.539910960082594 38.0 36.0 38.0 31.0 38.0 72-73 35.48162422573985 38.0 36.0 38.0 31.0 38.0 74-75 35.483581383344806 38.0 36.0 38.0 31.0 38.0 76 34.58778389538885 37.0 34.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 1.0 21 12.0 22 35.0 23 89.0 24 147.0 25 353.0 26 653.0 27 1183.0 28 1929.0 29 3209.0 30 4824.0 31 7336.0 32 10263.0 33 14252.0 34 19414.0 35 26798.0 36 40765.0 37 101216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.74681693048864 18.010581555402617 9.301015141087406 25.941586373021337 2 24.178854094975915 21.138592567102545 29.969029593943564 24.713523743977976 3 20.443048864418444 21.760151410874055 29.815467997247076 27.98133172746043 4 14.475223675154853 18.04370268410186 36.06589814177564 31.415175498967653 5 13.817532690984171 33.46223331039229 36.08568479008947 16.634549208534068 6 29.53759463179628 37.86003097040606 18.42309015829319 14.179284239504472 7 28.87044046799725 29.80858568479009 21.48700963523744 19.833964211975225 8 25.294218857536134 35.704576737783896 19.433499655884376 19.567704748795595 9 24.73632140399174 17.01780798348245 20.679198210598763 37.56667240192705 10-11 24.68513420509291 25.454662766689605 27.41762732278045 22.442575705437026 12-13 25.357450103234687 23.007140399174123 26.634979353062626 25.00043014452856 14-15 23.058542670337236 23.969373709566412 23.68784411562285 29.284239504473504 16-17 23.93044562973159 27.62581727460427 24.670294218857535 23.77344287680661 18-19 23.509119064005507 26.694339298004127 25.997935306262903 23.79860633172746 20-21 22.687973158981418 26.914143152099108 25.88781830695114 24.510065381968342 22-23 22.956383344803854 27.068780110116997 26.0663282863042 23.908508258774948 24-25 23.65579834824501 27.049208534067446 25.950404335856845 23.344588781830694 26-27 22.85637474191328 27.38106503785272 26.247849277357194 23.514710942876807 28-29 23.30329490708878 26.507441500344115 26.88811940812113 23.301144184445974 30-31 22.990794907088784 27.690554026152785 26.420767377838956 22.897883688919478 32-33 22.28987439779766 27.670767377838956 26.829189607708194 23.210168616655196 34-35 23.90635753613214 26.12590330350998 26.40614246386786 23.56159669649002 36-37 22.977460426703374 26.69197350309704 26.067833792154165 24.262732278045423 38-39 22.48494494150034 26.81370440467997 27.166637990364762 23.534712663454922 40-41 22.473976256022024 25.75404335856848 27.80475739848589 23.967222986923606 42-43 23.173606331727463 25.99879559532003 27.306865106675843 23.520732966276668 44-45 22.20922229869236 26.646163110805233 27.490106675843084 23.654507914659327 46-47 22.894012388162423 25.486708534067446 27.291379903647627 24.327899174122507 48-49 22.23331039229181 25.48025636613902 27.6288282863042 24.65760495526497 50-51 21.717567102546457 25.462620440467997 28.33813661390227 24.481675843083277 52-53 21.241397109428767 25.498752580867173 29.32897453544391 23.93087577426015 54-55 20.83598589125946 25.66263764624914 28.7880677907777 24.713308671713698 56-57 21.1906400550585 25.675972126634548 27.99595664143152 25.13743117687543 58-59 20.58671713695802 25.599191328286302 28.894098417068136 24.919993117687543 60-61 21.130419821059874 26.01793702684102 27.81852202339986 25.033121128699243 62-63 19.809876118375776 26.72681520991053 27.944339298004127 25.518969373709567 64-65 20.352288368891948 26.9018840330351 27.17653131452168 25.569296283551274 66-67 20.216577770130765 26.81284411562285 26.756065037852718 26.21451307639367 68-69 20.293358568479007 27.145560908465242 26.261398830006883 26.299681693048864 70-71 20.704791810048174 26.841018582243635 26.02352890571232 26.430660701995873 72-73 20.66607880247763 26.364203372333105 25.930617687543016 27.039100137646248 74-75 20.720707157604956 26.641861665519617 25.791035788024775 26.846395388850652 76 21.25043014452856 26.706813489332415 25.487353750860287 26.555402615278734 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.5 12 1.0 13 5.0 14 7.0 15 14.5 16 37.5 17 51.0 18 84.5 19 140.0 20 235.0 21 308.0 22 367.0 23 527.0 24 728.0 25 828.0 26 1021.0 27 1384.5 28 1745.5 29 1936.0 30 2183.5 31 2684.0 32 3592.5 33 4248.0 34 4599.0 35 5445.5 36 6675.5 37 7410.0 38 8171.5 39 9787.5 40 11506.5 41 12984.0 42 13597.0 43 14132.0 44 14831.0 45 14606.0 46 14217.0 47 14033.5 48 13146.0 49 12047.0 50 11652.0 51 10883.5 52 9115.0 53 7613.0 54 7111.0 55 6527.5 56 5531.0 57 4617.0 58 4116.0 59 3858.5 60 3191.5 61 2613.0 62 2444.0 63 2301.5 64 2133.0 65 1974.5 66 1841.0 67 1840.0 68 1706.5 69 1539.0 70 1495.5 71 1486.0 72 1449.0 73 1333.5 74 1235.5 75 1216.0 76 1129.5 77 919.5 78 716.0 79 636.0 80 593.5 81 474.0 82 345.0 83 293.0 84 245.0 85 154.5 86 90.0 87 68.0 88 58.0 89 35.0 90 16.5 91 9.5 92 8.0 93 5.5 94 2.0 95 3.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 76 232480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.59682967150872 #Duplication Level Percentage of deduplicated Percentage of total 1 60.42827047775204 26.949092858401663 2 20.876370178037813 18.620398499786333 3 7.8437049072883696 10.494131152317495 4 3.279763939494524 5.850682950895749 5 1.7344151837548307 3.867470926479634 6 1.0452217691904295 2.7968146325723158 7 0.7859097628228457 2.4534358680850388 8 0.6033950790129681 2.1527606050694312 9 0.46177176218486893 1.8534200962743927 >10 2.8952989685196187 22.538157641671024 >50 0.04089123586109415 1.1359815009384187 >100 0.00398938886449699 0.30245396266175595 >500 0.0 0.0 >1k 9.973472161242474E-4 0.9851993048467492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGAAATGCCATCTCGTATGCCGT 2215 0.9527701307639367 No Hit TCTTATACACATCTCCGAGCCCACGAGACGAAATGCCATCTCGTATGCCG 264 0.11355815554026152 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 8.602890571231934E-4 0.0 2 0.0 0.0 0.0 8.602890571231934E-4 0.0 3 0.0 0.0 0.0 8.602890571231934E-4 0.0 4 0.0 0.0 0.0 0.00258086717136958 0.0 5 0.0 0.0 0.0 0.00258086717136958 0.0 6 0.0 0.0 0.0 0.00258086717136958 0.0 7 0.0 0.0 0.0 0.00258086717136958 0.0 8 0.0 0.0 0.0 0.00258086717136958 0.0 9 0.0 0.0 0.0 0.00258086717136958 0.0 10 0.0 0.0 0.0 0.00258086717136958 0.0 11 0.0 0.0 0.0 0.00258086717136958 0.0 12 0.0 0.0 0.0 0.00258086717136958 0.0 13 0.0 0.0 0.0 0.00258086717136958 0.0 14 0.0 0.0 0.0 0.00258086717136958 0.0 15 0.0 0.0 0.0 0.00258086717136958 0.0 16 0.0 0.0 0.0 0.00258086717136958 0.0 17 0.0 0.0 0.0 0.003011011699931177 0.0 18 0.0 0.0 0.0 0.003011011699931177 0.0 19 0.0 0.0 0.0 0.003011011699931177 0.0 20 0.0 0.0 0.0 0.003011011699931177 0.0 21 0.0 0.0 0.0 0.003011011699931177 0.0 22 0.0 0.0 0.0 0.0034411562284927736 0.0 23 0.0 0.0 0.0 0.0034411562284927736 0.0 24 0.0 0.0 0.0 0.0038713007570543704 0.0 25 0.0 0.0 0.0 0.005591878871300757 0.0 26 0.0 0.0 0.0 0.007312456985547144 0.0 27 0.0 0.0 0.0 0.013764624913971095 0.0 28 0.0 0.0 0.0 0.024518238128011013 0.0 29 0.0 0.0 0.0 0.03527185134205093 0.0 30 0.0 0.0 0.0 0.05032690984170681 0.0 31 0.0 0.0 0.0 0.06409153475567791 0.0 32 0.0 0.0 0.0 0.077856159669649 0.0 33 0.0 0.0 0.0 0.10624569855471439 0.0 34 0.0 0.0 0.0 0.14839986235375086 0.0 35 0.0 0.0 0.0 0.21808327598072952 0.0 36 0.0 0.0 0.0 0.33508258774948385 0.0 37 0.0 0.0 0.0 0.5170337233310393 0.0 38 0.0 0.0 0.0 0.756194081211287 0.0 39 0.0 0.0 0.0 1.0396593255333793 0.0 40 0.0 0.0 0.0 1.3665691672401927 0.0 41 0.0 0.0 0.0 1.7407949070887818 0.0 42 0.0 0.0 0.0 2.173520302821748 0.0 43 0.0 0.0 0.0 2.6720578114246387 0.0 44 0.0 0.0 0.0 3.276410874053682 0.0 45 0.0 0.0 0.0 3.959910529938059 0.0 46 0.0 0.0 0.0 4.659325533379215 0.0 47 0.0 0.0 0.0 5.406056434962148 0.0 48 0.0 0.0 0.0 6.104181004817619 0.0 49 0.0 0.0 0.0 6.820801789401239 0.0 50 0.0 0.0 0.0 7.472040605643496 0.0 51 0.0 0.0 0.0 8.088867859600827 0.0 52 0.0 0.0 0.0 8.715588437715072 0.0 53 0.0 0.0 0.0 9.333275980729525 0.0 54 0.0 0.0 0.0 10.022367515485204 0.0 55 0.0 0.0 0.0 10.768238128011012 0.0 56 0.0 0.0 0.0 11.539057123193393 0.0 57 0.0 0.0 0.0 12.284067446662078 0.0 58 0.0 0.0 0.0 13.050154852030282 0.0 59 0.0 0.0 0.0 13.762474191328286 0.0 60 0.0 0.0 0.0 14.434790089470061 0.0 61 0.0 0.0 0.0 15.100223675154853 0.0 62 0.0 0.0 0.0 15.76006538196834 0.0 63 0.0 0.0 0.0 16.381194081211287 0.0 64 0.0 0.0 0.0 16.988988300068822 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTT 335 0.0 56.41791 47 CGTCTTC 340 0.0 55.588234 48 TCGTATG 355 0.0 54.225353 40 CTCGTAT 345 0.0 53.768116 39 CGTATGC 365 0.0 53.698627 41 TATGCCG 375 0.0 53.2 43 AACCGAG 20 0.006945097 52.5 46 TACGGAG 20 0.006945097 52.5 52 CTACGGA 20 0.006945097 52.5 51 GCCGTCT 380 0.0 50.65789 46 TGCCGTC 395 0.0 50.506332 45 ATCTCGT 295 0.0 49.83051 37 GTATGCC 395 0.0 49.620255 42 ATGCCGT 405 0.0 49.25926 44 TCTCGTA 300 0.0 49.000004 38 CATCTCG 305 0.0 47.04918 36 GTCTTCT 395 0.0 46.96203 49 CTGCGTT 30 5.869674E-4 46.666668 23 CTTGAAA 425 0.0 44.47059 57 TCTATCG 40 4.583447E-5 43.75 29 >>END_MODULE