SRR1781101_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781101_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	461560
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	57320	12.418753791489731	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	5743	1.2442586012652743	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	2818	0.610538174885172	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	1422	0.308085622670942	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	1173	0.2541381402201231	No Hit
CTAATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	1111	0.24070543374642514	No Hit
CTTAAACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	1049	0.22727272727272727	No Hit
CTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTC	887	0.19217436519629083	No Hit
CTTATACACATCTCCGAGCCCACGAGACACAAATAAATCTCGTATGCCGT	727	0.15750931623190917	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGAC	15	0.0022245497	69.9961	12
AGCTTCG	15	0.0022245497	69.9961	24
AGGGGGG	6930	0.0	63.53181	70
TGCCGTA	50	1.4551915E-11	62.996487	45
CGTCTAC	95	0.0	55.26008	48
TATGCCG	8620	0.0	54.40532	43
ATGCCGT	8645	0.0	54.36944	44
CGTATGC	8750	0.0	54.23698	41
TGCCGTC	8620	0.0	54.161716	45
GTATGCC	8670	0.0	54.131927	42
CTCGTAT	8725	0.0	54.111603	39
GCCGTCT	8615	0.0	54.071274	46
TCGTATG	8850	0.0	54.059135	40
TCTCGTA	8715	0.0	54.053215	38
AATCTCG	8730	0.0	54.040516	36
CCGTCTT	8565	0.0	53.978313	47
CGTCTTC	8600	0.0	53.96211	48
ATCTCGT	8670	0.0	53.72826	37
CTGCTTG	8720	0.0	53.661003	54
TAAATCT	8745	0.0	53.58764	34