SRR1781042_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781042_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	274337
Sequences flagged as poor quality	0
Sequence length	76
%GC	61

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	68584	24.999908871205854	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCTTG	15	0.0022231399	69.99963	43
TGGTCGC	30	1.0214171E-7	69.99963	49
TCGGTGG	65	0.0	59.230465	45
CTCGGTG	45	2.6935595E-8	54.444164	44
CGGTGGT	65	3.6379788E-12	53.845875	46
GTCCTGA	20	0.006936555	52.518875	1
TGGGTCG	20	0.0069465665	52.49973	12
TCGCCGT	35	2.0833468E-5	49.999737	52
CCGGCGA	45	1.6811282E-6	46.666428	21
CACGTCT	30	5.871686E-4	46.666424	7
CGCGTGT	30	5.871686E-4	46.666424	7
TGCCGGC	70	3.8198777E-10	44.999763	19
GGCGCGT	55	1.3077806E-7	44.545223	5
CCCAATG	40	4.585758E-5	43.749775	43
CGCGTCT	40	4.585758E-5	43.749775	7
CGTATCA	35	0.0012541306	39.99979	56
TGGCCGG	35	0.0012541306	39.99979	52
AAATTCG	35	0.0012541306	39.99979	40
ACGTCTG	35	0.0012541306	39.99979	8
GCGCGTG	45	9.183871E-5	38.888687	6