SRR1781029_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781029_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	479806
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	58758	12.246199505633527	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	7703	1.6054405322151035	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	3239	0.6750645052375336	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	1717	0.357852965573586	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	1679	0.34993309796042565	No Hit
CTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTC	1150	0.23968020408248336	No Hit
CTTATACACATCTCCGAGCCCACGAGACACAAATAAATCTCGTATGCCGT	1031	0.21487851339916547	No Hit
CTTAAACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	678	0.14130711162428147	No Hit
CATATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	641	0.13359566157988853	No Hit
CTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	547	0.11400441011575511	No Hit
CTTTACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTC	511	0.10650137764012955	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACCGA	15	0.0022242703	69.99874	11
AGGGGGG	7330	0.0	64.45997	70
AACCGAG	30	8.373572E-6	58.332287	12
CGTCTTA	60	1.8189894E-12	58.332287	48
CGTCTAC	65	3.6379788E-12	53.845192	48
CCGTCTT	9675	0.0	53.394394	47
TATGCCG	9830	0.0	53.335773	43
GCCGTCT	9760	0.0	53.28798	46
CGTCTTC	9825	0.0	53.256046	48
ATGCCGT	9870	0.0	53.225998	44
GTATGCC	9850	0.0	53.15641	42
TGCCGTC	9865	0.0	53.14654	45
CTCGTAT	10020	0.0	53.127792	39
CGTATGC	9995	0.0	53.120613	41
TCGTATG	10180	0.0	53.083534	40
ATCTCGT	9930	0.0	53.045376	37
AATCTCG	10030	0.0	53.005035	36
TCTCGTA	9980	0.0	52.990036	38
TACGCTG	20	0.0069500715	52.49906	67
TCGTATC	20	0.0069500715	52.49906	40