SRR1781019_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1781019_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76507
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16698	21.82545388003712	No Hit
CTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTG	1092	1.427320375913315	No Hit
ATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTGGTC	107	0.13985648372044387	No Hit
TCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGT	105	0.13724234383781878	No Hit
CTCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGG	83	0.10848680512894245	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCTA	15	0.0022178558	69.99281	1
ACAGGCA	20	0.006912285	52.52894	31
CGCTTGT	20	0.006912285	52.52894	35
GTAGCGA	20	0.0069301967	52.494606	49
GTTCAAA	20	0.0069301967	52.494606	39
CCGCGTC	20	0.0069301967	52.494606	17
CTTTACC	20	0.0069301967	52.494606	61
GAGGCTA	20	0.0069301967	52.494606	24
TCAGGGA	30	5.847826E-4	46.661877	41
TCGCCGT	180	0.0	42.773384	52
CGCCGTA	180	0.0	42.773384	53
GCCGTAT	180	0.0	42.773384	54
ATCTCGG	190	0.0	42.36407	42
AGATCTC	190	0.0	42.36407	40
GATCTCG	190	0.0	42.36407	41
GTCGCCG	185	0.0	41.617348	51
TGGTCGC	185	0.0	41.617348	49
TCTCGGT	195	0.0	41.277813	43
CGTATCA	190	0.0	40.522152	56
ATTAAAA	200	0.0	40.24587	62