SRR1780997_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780997_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	206629
Sequences flagged as poor quality	0
Sequence length	76
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	45640	22.087896665037338	No Hit
CTTATACACATCTGACGCTGCCGACGAGGCAACCTGTGTAGATCTCGGTG	2210	1.0695497727811683	No Hit
ATACACATCTGACGCTGCCGACGAGGCAACCTGTGTAGATCTCGGTGGTC	293	0.1418000377488155	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTAACG	15	0.0022208504	70.01163	18
CCGGCGA	15	0.0022229846	69.994675	21
TGCCGGC	25	2.8340255E-6	69.994675	19
GCGGCCC	20	0.0069460967	52.496006	13
CTACCCG	20	0.0069527505	52.4833	10
CTTTATA	20	0.0069527505	52.4833	2
CGGTGGT	370	0.0	44.456078	46
TGGTCGC	380	0.0	44.20716	49
TGTGACG	40	4.570631E-5	43.76786	38
GATCTCG	360	0.0	43.757263	41
GATAACG	40	4.5837216E-5	43.74667	44
TAACGTT	40	4.5837216E-5	43.74667	46
ATAACGT	40	4.5837216E-5	43.74667	45
CGATAAC	40	4.5837216E-5	43.74667	43
AGATCTC	380	0.0	43.296658	40
TCGCCGT	380	0.0	43.28618	52
GTCGCCG	380	0.0	43.28618	51
TCGGTGG	380	0.0	43.28618	45
GCCGTAT	380	0.0	43.28618	54
ATCTCGG	370	0.0	42.564327	42