SRR1780934_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780934_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	915492
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	46374	5.0654729915717445	No Hit
CTTATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGGTG	5287	0.577503681080774	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTCGC	1025	46.773006	49
GCCGTAT	960	46.666847	54
TCGCCGT	1000	45.500175	52
GTAGATC	1055	44.13304	38
GTCGCCG	1080	44.074245	51
TCGGTGG	1090	43.660355	45
CGCCGTA	1035	43.62336	53
CTCGGTG	1110	43.191288	44
CGTATCA	1060	42.259697	56
TCTCGGT	1200	41.120667	43
GATCTCG	1125	41.066826	41
CGGTGGT	1160	41.025677	46
AGATCTC	1175	40.215122	40
CCGTATC	1110	40.045204	55
ATCTCGG	1165	39.955055	42
GTGGTCG	1205	39.78182	48
GGTGGTC	1245	38.786854	47
TAGATCT	1205	38.637188	39
GTATCAT	1185	38.386288	57
GGTCGCC	1275	37.33348	50