SRR1780927_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780927_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57755
Sequences flagged as poor quality	0
Sequence length	76
%GC	88

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	38467	66.6037572504545	No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGTG	278	0.48134360661414594	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	98	0.16968227859059823	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	94	0.16275647130118603	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	65	0.11254436845294778	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	60	0.10388710934118259	No Hit
GGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	59	0.10215565751882953	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATGCGC	15	0.002215712	69.98788	3
GTATCAT	30	1.0083568E-7	69.98788	57
ATGCGCA	15	0.002215712	69.98788	4
CGTATCA	35	3.6361598E-9	69.98788	56
TATCATT	30	1.0083568E-7	69.98788	58
CGGCTGG	20	7.8718775E-5	69.98788	9
GTTGGGG	20	7.8718775E-5	69.98788	1
TGGCGGT	15	0.002215712	69.98788	13
GCCGTAT	35	3.6361598E-9	69.98788	54
TTGTGCG	20	7.8718775E-5	69.98788	2
TGTGCGG	15	0.002215712	69.98788	3
CGCCGGG	15	0.002215712	69.98788	53
CATGTGG	15	0.002215712	69.98788	9
TCTCGGT	50	1.2732926E-11	62.98909	43
GGTCGCC	50	1.2732926E-11	62.98909	50
CCGTATC	40	1.0450094E-8	61.23939	55
CATTAAA	40	1.0450094E-8	61.23939	61
ATCATTA	40	1.0450094E-8	61.23939	59
TGGCGCT	40	1.0450094E-8	61.23939	13
TCATTAA	40	1.0450094E-8	61.23939	60