SRR1780915_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780915_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47726
Sequences flagged as poor quality	0
Sequence length	76
%GC	85

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	28922	60.600092192934675	No Hit
CTTATACACATCTGACGCTGCCGACGATACTCCTTGTGTAGATCTCGGTG	720	1.5086116582156477	No Hit
TCTTATACACATCTGACGCTGCCGACGATACTCCTTGTGTAGATCTCGGT	68	0.14247998994258895	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	67	0.140384695972845	No Hit
CTCTTATACACATCTGACGCTGCCGACGATACTCCTTGTGTAGATCTCGG	63	0.13200352009386918	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	62	0.12990822612412523	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	51	0.10685999245694171	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	48	0.10057411054770984	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTGTAG	15	0.002211818	70.00001	35
ATCATTA	160	0.0	56.875004	59
TCATTAA	160	0.0	56.875004	60
GTATCAT	160	0.0	54.687504	57
TATCATT	160	0.0	54.687504	58
CATTAAA	170	0.0	53.529408	61
CCGTATC	165	0.0	53.030304	55
CGTATCA	165	0.0	53.030304	56
GCCGTAT	165	0.0	53.030304	54
ACTCCTA	20	0.00691146	52.500004	29
CCGCATC	20	0.00691146	52.500004	69
TCTCGGT	160	0.0	52.500004	43
CTCGGTG	155	0.0	51.935482	44
AGATCTC	170	0.0	51.470585	40
CGCCGTA	170	0.0	51.470585	53
GTAGATC	160	0.0	50.312504	38
TAGATCT	160	0.0	50.312504	39
ATCTCGG	170	0.0	49.411762	42
ATTAAAA	185	0.0	49.18919	62
TCGGTGG	165	0.0	48.78788	45