SRR1780903_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780903_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44324
Sequences flagged as poor quality	0
Sequence length	76
%GC	85

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	27743	62.59137261979966	No Hit
CTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTG	997	2.249345726919953	No Hit
TCTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGT	118	0.2662214601570255	No Hit
CTCTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGG	80	0.1804891255301868	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	69	0.1556718707697861	No Hit
ATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTGGTC	65	0.14664741449327678	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	55	0.12408627380200343	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	48	0.10829347531811208	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	45	0.10152513311073008	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAAAAGG	120	58.333332	70
TGGTCGC	205	56.341465	49
GGTGGTC	200	56.000004	47
TGTGTAG	220	55.681816	35
CTCGGTG	195	55.641026	44
AGTGTGT	215	55.34884	33
TCGGTGG	210	54.999996	45
CGGTGGT	210	54.999996	46
GTGGTCG	210	54.999996	48
CAGTGTG	210	54.999996	32
TCGCCGT	205	54.634148	52
CGCCGTA	205	54.634148	53
GTAGATC	225	54.444447	38
TAGATCT	220	54.090908	39
TCTCGGT	195	53.846153	43
TATCATT	195	53.846153	58
GCAGTGT	215	53.720932	31
GCCGTAT	215	53.720932	54
AGATCTC	215	53.720932	40
GTGTAGA	235	53.617023	36