SRR1780902_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780902_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	177030
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	30044	16.97113483590352	No Hit
CTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTG	951	0.5371970852397899	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTCGC	160	0.0	45.9375	49
GCCGTAT	160	0.0	43.75	54
CGTATCA	165	0.0	42.424244	56
GTATCAT	165	0.0	42.424244	57
GATCTCG	165	0.0	42.424244	41
TCGGTGG	175	0.0	42.0	45
TCGCCGT	170	0.0	41.17647	52
GTCGCCG	170	0.0	41.17647	51
CTCGGTG	180	0.0	40.833336	44
AGATCTC	165	0.0	40.303032	40
CTTATAG	35	0.001252893	40.0	34
TATACCG	35	0.001252893	40.0	6
GTGGTCG	195	0.0	39.48718	48
GTAGATC	170	0.0	39.11765	38
ATCTCGG	180	0.0	38.88889	42
CGCCGTA	185	0.0	37.837837	53
TCTCGGT	195	0.0	37.692307	43
GGTGGTC	205	0.0	35.85366	47
CGGTGGT	205	0.0	35.85366	46
CCGTATC	200	0.0	35.000004	55