SRR1780897_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780897_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	474519
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	35225	7.4233065483152405	No Hit
CTTATACACATCTGACGCTGCCGACGATATGCAGTGTGTAGATCTCGGTG	1044	0.22001226505155747	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	225	51.3331	54
CGTATCA	230	50.217167	56
CGCCGTA	230	50.217167	53
CCGTATC	245	48.57121	55
CGGTGGT	260	47.11021	46
GTGGTCG	255	45.28914	48
TCGCCGT	250	44.799797	52
TCTCGGT	260	44.418198	43
TGGTCGC	265	43.580112	49
GTCGCCG	260	43.07219	51
TCGGTGG	290	42.236736	45
CTCGGTG	280	41.24547	44
GGTGGTC	300	39.662308	47
GGTCGCC	285	39.29393	50
ATCTCGG	300	38.49577	42
GTAGATC	305	37.872673	38
GATCTCG	310	37.257893	41
TAGATCT	320	36.09739	39
GTATCAT	340	33.970436	57
AGATCTC	360	32.08657	40